Query= MSMg01no535_a19.b1 MSMg01no535_a19.b1 CHROMAT_FILE:
MSMg01no535_a19.b1 PHD_FILE: MSMg01no535_a19.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:12:45 2005
(621 letters)
>mm_chr16_73521291_73522315
Length = 1025
Score = 1044 bits (540), Expect = 0.0
Identities = 604/636 (94%), Gaps = 18/636 (2%)
Strand = Plus / Plus
Query: 4 ggaattctctatttctcatcttgctgtaggagctgcagggataaacatttgctaccatgc 63
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 204 ggaattctctatttcccatcttgctgtaggagctgcagggataaacatttgctaccatgc 263
Query: 64 ctggtttttatgtgggttctgttttattgttgttgttggttttttgttttgttttgtttt 123
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 264 ctggtttttatgtgggttctgttttattgttgttgttggttttttgttttgttttgtttt 323
Query: 124 ttcaagttcaggtccttgtattgacagggcaagcactttatgcactgaatcatctccttc 183
||||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 324 ttcaaattcaggtccttgttttgacagggcaagcactttatgcactgaatcatctccttc 383
Query: 184 actctcttcttttatgtctcttctctttaacctagttttgttaaaggatgttttcagact 243
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 384 actctcttcttttatgtcacttctctttaacctagttttgttaaaggatgttttcagact 443
Query: 244 tctaccttgtttttcaatagggttaaaataaatgccaaggttagatctttttgtgagaaa 303
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 444 tctaccttgtttttcaatagggttaaaataaatgccaaggttagatctttttgtgagaaa 503
Query: 304 taagatgaaaagacttttttttt----acatacaattttttcttaaaggcactattatgt 359
||||||||||||||||||||||| ||| |||||||||||||||||||||||||||||
Sbjct: 504 taagatgaaaagactttttttttttttacacacaattttttcttaaaggcactattatgt 563
Query: 360 tttatatattcatttccccccaatttatttacttattttgttgacatccttatcacagcc 419
|||||||||||||||||||||||||||||| ||||||| |||||||||||||||||||||
Sbjct: 564 tttatatattcatttccccccaatttatttgcttatttagttgacatccttatcacagcc 623
Query: 420 ccatctctttcctcttctcccagtccc--------------tctctgcattccacttttc 465
||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 624 ccatctctttcctcttctcccagtcccattctcaccctccctctctgcattccacttttc 683
Query: 466 tcttctgctctgagaagggaagccaccccacctaccatgggaagcaacccacccttgcac 525
||||||||||||||||||||||||||||||||||||||||| | ||||||||||||||||
Sbjct: 684 tcttctgctctgagaagggaagccaccccacctaccatgggtaccaacccacccttgcac 743
Query: 526 attgagtctcagcagaactacgtgcatcctttcccactgaggccagacaaggcagcccag 585
||| |||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 744 attaagtctcagcagaactacgtggatcctttcccactgaggccagacaaggcagcccag 803
Query: 586 ctagggaatagggattcaaagcgaggcaacagagtc 621
||||||||||| |||||| || ||||||||||||||
Sbjct: 804 ctagggaatagagattcagagggaggcaacagagtc 839
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 32
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 621
Length of database: 1025
Length adjustment: 10
Effective length of query: 611
Effective length of database: 1015
Effective search space: 620165
Effective search space used: 620165
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no535_a19.g1 MSMg01no535_a19.g1 CHROMAT_FILE:
MSMg01no535_a19.g1 PHD_FILE: MSMg01no535_a19.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:12:45 2005
(630 letters)
>mm_chr16_73679872_73680903
Length = 1032
Score = 1158 bits (599), Expect = 0.0
Identities = 624/633 (98%), Gaps = 3/633 (0%)
Strand = Plus / Minus
Query: 1 tctgtcgtcacagccttgcgacatg-ttttttccaatgtaatatttttattgattatttg 59
||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 1025 tctgtcgtcacagccttgcgacatgtttttttccaatgtaatatttttattgattattta 966
Query: 60 agaatttcatacaatgcatcatcggttcacactcaacctacccttgtgtcccaccccacg 119
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 965 agaatttcatacaatgcatcatcggttcacactcaacctacccttgtgtcccaccccacg 906
Query: 120 attaaaaaatataccaagtacaattggtgccacccccatgctcacctgagcgcggtcaaa 179
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 905 attaaaaaatataccaagtacaattggtgccacccccatgctcacctgagcgcggtcaaa 846
Query: 180 ctccccgtggccactgggatttcttgtgacatttaactcacttgattttcatccaggaat 239
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 845 ctccccgtggccactgggatttcttgtgacatttaactcacttgattttcatccaggaat 786
Query: 240 cactattgccctgacctggattgcaatgatgatttgaaagctgattatctacacattgcc 299
||||||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 785 cactattgccctggcctggattgcagtgatgatttgaaagctgattatctacacattgcc 726
Query: 300 tatgctttcttttctccctgccccgtgcatcagcatttgccctgaatgatcccccgttcc 359
||||||||||||||||||||||||||||||||||||||||||||||| |||||| || ||
Sbjct: 725 tatgctttcttttctccctgccccgtgcatcagcatttgccctgaattatccccggtccc 666
Query: 360 ttccctcctagtttagaggtctcggacactgttactctccacagaaactcctggctggat 419
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 665 ttccctcctagtttagaggtctcggacactgttactctccacagaaactcctggctggat 606
Query: 420 gctttgtgtctgttaggaaaaaaagaacgtactgaaaactcactcacgtcaatcctttca 479
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 605 gctttgtgtctgttaggaaaaaaagaacgtactgaaaactcactcacgtcaatcctttca 546
Query: 480 ttttgctttaatgattttgtgagtgagtaaattggatcgtaacgctgctgaaggaggttt 539
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 545 ttttgctttaatgattttgtgagtgagtaaattggatcgtaacgctgctgaaggaggttt 486
Query: 540 ccgggcagatgtttaatggtgtaacagaggaaatatctcaggggaaactatgctcaggtt 599
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 485 ccgggcagatgtttaatggtgtaacagaggaaatatctcaggggaaactatgctcaggtt 426
Query: 600 agctgcaaaagtgt--gtgtctctttctgccaa 630
|||||||||||||| |||||||||||||||||
Sbjct: 425 agctgcaaaagtgtatgtgtctctttctgccaa 393
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 31
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 630
Length of database: 1032
Length adjustment: 10
Effective length of query: 620
Effective length of database: 1022
Effective search space: 633640
Effective search space used: 633640
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
