Query= MSMg01no535_e19.b1 MSMg01no535_e19.b1 CHROMAT_FILE:
MSMg01no535_e19.b1 PHD_FILE: MSMg01no535_e19.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:13:04 2005
(642 letters)
>mm_chr16_66829448_66830487
Length = 1040
Score = 1160 bits (600), Expect = 0.0
Identities = 628/638 (98%), Gaps = 2/638 (0%)
Strand = Plus / Plus
Query: 5 gaattccaagatagagttgcctgaagaagtaactggaattctatcacccagacagtccct 64
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattccaagatagaggtgcctgaagaagtaactggaattctatcacccagacagtccct 264
Query: 65 acgtgtgtatgttgtagtaagaaagatggcagttcaaaggcagtatctctacatctgaac 124
|| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 acatgtgtatgttgtagtaagaaagatggcagttcaaaggcagtatctctacatctgaac 324
Query: 125 aggacctgagactaacaccttccagtacaagggatgtcagtattgtcaacctaactttag 184
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 325 aggacctgagactaacaccttccagtacaagggatgtcagtattgtcaacctaattttag 384
Query: 185 gcaaacgtgggaacaggtagtcatctgaagcaatatgccaagatgcagaacatatatgat 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 gcaaacgtgggaacaggtagtcatctgaagcaatatgccaagatgcagaacatatatgat 444
Query: 245 gtagaaatctgttataagactctgaggacccagaaatattagaaaatttgaaatcctact 304
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 445 gtagaaatctgttataagactctgaggacccagaaatattagaaaatttgaaatcctact 504
Query: 305 gaagatgtacagaaatccttgttactaaattgggaattgtataagaaagtaccatttatg 364
|||| ||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 505 gaag--gtacagaaatccttgttactaaattgggaattgtataagaaagcaccatttatg 562
Query: 365 tgttatgaattgtataacatgactatataagattaataggcaaaattattattgccaatt 424
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 563 tgttatgaattgtataacatgactatataagattaataggcaaaattattattgtcaatt 622
Query: 425 aatgtgggaattgtttttctcattttagacactgataattacaggggataaaacctggat 484
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 623 aatgtgggaattgtttttctcattttagacactgataattacaggggataaaacctggac 682
Query: 485 actcagcatttttatgactgcccttggttctcatccagggatggataagagaactctgct 544
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 683 actcagcatttttatgactgcccttggttctcatccagggatggataagggaactctgct 742
Query: 545 tgcttatctcctcttaaatgaacttccttgcatagaggccctcaagagtggacctgacct 604
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 743 tgcttatctcctcttaaatgaacttccttgcatagaggccctcaagagtggacctgaact 802
Query: 605 ctagtctagaatctaatctcttctagtgaacagtttag 642
||||||||||||||||||||||||||||||||||||||
Sbjct: 803 ctagtctagaatctaatctcttctagtgaacagtttag 840
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 28
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 642
Length of database: 1040
Length adjustment: 10
Effective length of query: 632
Effective length of database: 1030
Effective search space: 650960
Effective search space used: 650960
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no535_e19.g1 MSMg01no535_e19.g1 CHROMAT_FILE:
MSMg01no535_e19.g1 PHD_FILE: MSMg01no535_e19.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:13:04 2005
(586 letters)
>mm_chr16_66982053_66983038
Length = 986
Score = 1118 bits (578), Expect = 0.0
Identities = 584/586 (99%)
Strand = Plus / Minus
Query: 1 tctttcctgactaaatctacctgaagacatcagcctgttagaattcattcctcaggctga 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 786 tctttcctgactaaatctacctgaagacatcagcctgttagaattcattcctcaggctga 727
Query: 61 tttcaccaaaagcaaatagctatgaataatacagattatatggtcatatgcttcaggtat 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 726 tttcaccaaaagcaaatagctatgaataatacagattatatggtcatatgcttcaggtat 667
Query: 121 atatgttaaaaatactgaaaactaggtaggaaaacaaaattccctatttaaaaatatgca 180
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 666 atatgttaaaaatactgaaaactaggtaggaaaacaaaattccctatttacaaatatgca 607
Query: 181 agaagaatggaatcgtcagatcatccaagaaaatatgagtattacaagaggtaaatgcat 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 606 agaagaatggaatcgtcagatcatccaagaaaatatgagtattacaagaggtaaatgcat 547
Query: 241 aaatgcttacaatattacaagctaaaactacaataagatgcaatacatatttaatacatt 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 546 aaatgcttacaatattacaagctaaaactacaataagatgcaatacatatttaatacatt 487
Query: 301 atctcaattgaatggtgctgattataatgaacattgatgaactttgaaaaatctaccaat 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 486 atctcaattgaatggtgctgattataatgaacattgatgaactttgaaaaatctaccaat 427
Query: 361 catagtacaaatgatatgaccactatagaaaattccatgacaattgtttgaaattttaac 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 426 catagtacaaatgatatgaccactatagaaaattccatgacaattgtttgaaattttaac 367
Query: 421 aatttgctactacatggtacaaaaacataaatgtctatcaagacatgaataaacaaattc 480
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 366 aatttgctactacgtggtacaaaaacataaatgtctatcaagacatgaataaacaaattc 307
Query: 481 gcataaacttttgcaatgaattggcagtgcataggcaagaactatcagtatgcagcaaca 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 306 gcataaacttttgcaatgaattggcagtgcataggcaagaactatcagtatgcagcaaca 247
Query: 541 atgatatttctccaacgtactaaggtgaaggatctaggaactgaag 586
||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 246 atgatatttctccaacgtactaaggtgaaggatctaggaactgaag 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 31
Number of extensions: 2
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 586
Length of database: 986
Length adjustment: 10
Effective length of query: 576
Effective length of database: 976
Effective search space: 562176
Effective search space used: 562176
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
