Query= MSMg01no536_k24.b1 MSMg01no536_k24.b1 CHROMAT_FILE:
MSMg01no536_k24.b1 PHD_FILE: MSMg01no536_k24.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:14:52 2005
(499 letters)
>mm_chr16_4127949_4128847
Length = 899
Score = 951 bits (492), Expect = 0.0
Identities = 495/496 (99%)
Strand = Plus / Minus
Query: 1 gttctgttggtgcagggcaacagaatgccacttccttaagtaacccaaatcccatagacc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 696 gttctgttggtgcagggcaacagaatgccacttccttaagtaacccaaatcccatagacc 637
Query: 61 ccagttccatgcagcgggcctatgctgctctaggactcccctacatgaaccagcctcaga 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 636 ccagttccatgcagcgggcctatgctgctctaggactcccctacatgaaccagcctcaga 577
Query: 121 cgcagctgcagcctcaggttcctggccagcaaccagcacagcctccagcccaccagcaga 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 576 cgcagctgcagcctcaggttcctggccagcaaccagcacagcctccagcccaccagcaga 517
Query: 181 tgaggactctcaatgccctaggtaagtgaaggaacacgcaagaactaactacctccaggt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 516 tgaggactctcaatgccctaggtaagtgaaggaacacgcaagaactaactacctccaggt 457
Query: 241 atattgtaaagatggtggtgcttactggagccttaggctgtttccagtttgttctgtctt 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 456 atattgtaaagatggtggtgcttactggagccttaggctgtttccagtttgttctgtctt 397
Query: 301 cagatccattgcttctgatcaacgtcttccagagaaaactgaggtgtaaatgtgcaggga 360
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 396 cagatccattgcttttgatcaacgtcttccagagaaaactgaggtgtaaatgtgcaggga 337
Query: 361 agatggtgcatggttgtaacatttcaagtgaggtagtgattcgctctgtgtgtgccactt 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 336 agatggtgcatggttgtaacatttcaagtgaggtagtgattcgctctgtgtgtgccactt 277
Query: 421 tatctagacagtttataaaggacattgttgtgcctcagaatgcagaatccaacttgagtg 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 276 tatctagacagtttataaaggacattgttgtgcctcagaatgcagaatccaacttgagtg 217
Query: 481 agctcttttttgtttg 496
||||||||||||||||
Sbjct: 216 agctcttttttgtttg 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 23
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 499
Length of database: 899
Length adjustment: 10
Effective length of query: 489
Effective length of database: 889
Effective search space: 434721
Effective search space used: 434721
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no536_k24.g1 MSMg01no536_k24.g1 CHROMAT_FILE:
MSMg01no536_k24.g1 PHD_FILE: MSMg01no536_k24.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:14:52 2005
(476 letters)
>mm_chr16_3964597_3965472
Length = 876
Score = 905 bits (468), Expect = 0.0
Identities = 474/476 (99%)
Strand = Plus / Plus
Query: 1 caggggtgtcttacactcatccaagccatccaggaccaggaggactctgtctggggctgt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 caggggtgtcttacactcatccaagccatccaggaccaggaggactctgtctggggctgt 260
Query: 61 ggccaccagactagcttccccaatgcttgagaagatggagtggatgagtctgtctgcaga 120
||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 261 ggccaccagactagcttccccaatgcttgagaagatggattggatgagtctgtctgcaga 320
Query: 121 cagtttctcataggtgttgagatcccgaaaggtcaagggcagaacccgtgagaagccctt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 cagtttctcataggtgttgagatcccgaaaggtcaagggcagaacccgtgagaagccctt 380
Query: 181 gcccacctgtcctctggcccagcaatgaacaaaatgcctcactagcgtggtcttgcccac 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 gcccacctgtcctctggcccagcaatgaacaaaatgcctcactagcgtggtcttgcccac 440
Query: 241 accagccactccaatggtgagagagactcgaggtgggatggatacccgggacagaggcag 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 accagccactccaatggtgagagagactcgaggtgggatggatacccgggacagaggcag 500
Query: 301 gaagagcctgtccagggtgataactctggcagggcgccagaccccacgcgtggcctccac 360
|||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 501 gaagagcctgtccagggtgataactctggcagggtgccagaccccacgcgtggcctccac 560
Query: 361 ctgtgtgaagtcatgctcctttagctgcaggtctgtcaggccctcgaccagcatgaggct 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 ctgtgtgaagtcatgctcctttagctgcaggtctgtcaggccctcgaccagcatgaggct 620
Query: 421 ggccagccggtgtgaggggctgcccagttctgggtcatttcccaccctgctcagca 476
||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 ggccagccggtgtgaggggctgcccagttctgggtcatttcccaccctgctcagca 676
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 23
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 476
Length of database: 876
Length adjustment: 10
Effective length of query: 466
Effective length of database: 866
Effective search space: 403556
Effective search space used: 403556
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
