NNNNTTCTAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XCGCGGAATTCCAGTCATTTCCACCAAAGAAGCTCTGACTGCTGACTAAA
GCCAAAACTGTAGAGGTGGGAAAGAACAGCGTTAGCTGAAAGCCTTGTGA
TTCTCCTCCCAAGACTGGGGCCAATTTTGGATTCTATGGTGTTGTGTATC
AATGTTTTCATGAAGGATTTCAAATGGAATTTTCCTCTAAAAATTTCCCA
GGCAAACAGAGATGCTGAGTTTATTTCAGTAGGTCCCTATCACCCCCAAC
TCTCTTCTTAACATATCATATGTAACCTGGAAGCAGCAGTCCCTAAGAGT
CCTATAAAGCCCACATCCTGGGAATCATGCCACGTGACTCCCTGCCATTG
CCCATGAGCTGGCTGTAGTAATACCATCTAACAAAGAGAAAACAAGCAAG
CAACCACGACTTACAGTAATGGAAACCCTTTTGACACTCAGAGAAGCCAA
CTGCCTTGGGAGCTTGCTCCACAGACAAGTCTGCACAGTCAAGAGTAGAA
GCTCTCAGACCAGCAACCTAAGGGCACTTAACTACTATGATCATGTGAAT
GGGCTTTGTCGAGGATTTCCCCCAGTGGCGCCTTCAGAGGAGTCTACAGG
GACAGAAAACTCATTTGCTACCTCATGAGAAGTCATGTGGGCCCCAACGA
AGCTGCAAATCTCNTACCTGCAGAAACTATGATTTCAAAGAAGTTTCGTA
TTTTAGTTGATAATTTGGGAAACTGTTCACAGGATATACTGATATACTGC
TT

XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXCAAATCCTTTAAACATTCTCTCGTCTCACAGCTCTGGTGTT
ATTAAAGGAATATCCTGTCATGGACCACAAAATGGATGGAATCAGAAGAT
GATATGTCAAGTGAAATAAGCCAACCGTGGAAACACCAATGCACCATGAT
CCTGCTTTTTTTGTTGTTGTTTTTTGTTTTGAGACAGGGTTTTTCTGTGT
AGCCCTGGCTGTCCTGGAACTCACTCTGTANACCAGGCTGGTTTCGAACT
CAGAAATCCACCTGCCTCTGCCTCCCGAGTGCTGGGATTAAAGGCATGTG
CCACCACTGCACGATCCTGCTTACAGGCCATATAAAAAAGAGCAACAATT
GATCCCGGAGAGAGCCAGATGTTTGGAAGGTGATTTACGGTGTGGATAAA
TGCCGCTTGTTTAATGGGCATAAAAACTCCAGTTTTATGATCCCCTCTCT
TTGCCCGCCGTCCTGGCCCCTTCTTTTTTTTTCTATCCGCACACACCACC
TTTTAACTTTTTTATATTTCCCTCCCGTGATCATCCGTCCTTTCCTTTTT
TTTTACAAAATACTCATCCATTTTTCTCTACCCTCTCTTTTTTTTCTCCC
CCTACAATACTTCTGTCATCACTAATCAAACACCACCTTTTCTTCTTCTT
TATTACCCTTACTCTTTATTCCCTCTTTATTTTTCCCTTCTTTCTTCTCC
GCCCCTTACCCTTTCTCCCCCCTTAATTTTATATTTTG

Query= MSMg01no536_p18.b1 MSMg01no536_p18.b1 CHROMAT_FILE:
MSMg01no536_p18.b1 PHD_FILE: MSMg01no536_p18.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:15:14 2005
         (495 letters)



>mm_chr16_24461658_24462552
          Length = 895

 Score =  926 bits (479), Expect = 0.0
 Identities = 488/491 (99%)
 Strand = Plus / Minus

                                                                       
Query: 5   gaattccagtcatttccaccaaagaagctctgactgctgactaaagccaaaactgtagag 64
           ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 695 gaattccagtcatttccaccaaagaagctctgactgcggactaaagccaaaactgtagag 636

                                                                       
Query: 65  gtgggaaagaacagcgttagctgaaagccttgtgattctcctcccaagactggggccaat 124
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 635 gtgggaaagaacagcgttagctgaaagccttgtgattctcctcccaagactggggccaat 576

                                                                       
Query: 125 tttggattctatggtgttgtgtatcaatgttttcatgaaggatttcaaatggaattttcc 184
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 575 tttggattctatggtgttgtgtatcaatgttttcatgaaggatttcaaatggaattttcc 516

                                                                       
Query: 185 tctaaaaatttcccaggcaaacagagatgctgagtttatttcagtaggtccctatcaccc 244
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 515 tctaaaaatttcccaggcaaacagagatgctgagtttatttcagtaggtccctatcaccc 456

                                                                       
Query: 245 ccaactctcttcttaacatatcatatgtaacctggaagcagcagtccctaagagtcctat 304
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 455 ccaactctcttcttaacatatcatatgtaacctggaagcagcagtccctaagagtcctat 396

                                                                       
Query: 305 aaagcccacatcctgggaatcatgccacgtgactccctgccattgcccatgagctggctg 364
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 395 aaagcccacatcctgggaatcatgccacgtgactccctgccattgcccatgagctggctg 336

                                                                       
Query: 365 tagtaataccatctaacaaagagaaaacaagcaagcaaccacgacttacagtaatggaaa 424
           ||||||||||||||||||||||||||||||||||||||||||| |||||| |||||||||
Sbjct: 335 tagtaataccatctaacaaagagaaaacaagcaagcaaccacggcttacaataatggaaa 276

                                                                       
Query: 425 cccttttgacactcagagaagccaactgccttgggagcttgctccacagacaagtctgca 484
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 275 cccttttgacactcagagaagccaactgccttgggagcttgctccacagacaagtctgca 216

                      
Query: 485 cagtcaagagt 495
           |||||||||||
Sbjct: 215 cagtcaagagt 205


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 22
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 495
Length of database: 895
Length adjustment: 10
Effective length of query: 485
Effective length of database: 885
Effective search space:   429225
Effective search space used:   429225
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)