Query= MSMg01no537_a14.b1 MSMg01no537_a14.b1 CHROMAT_FILE:
MSMg01no537_a14.b1 PHD_FILE: MSMg01no537_a14.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:15:18 2005
(577 letters)
>mm_chr16_44845345_44846321
Length = 977
Score = 735 bits (380), Expect = 0.0
Identities = 518/580 (89%), Gaps = 33/580 (5%)
Strand = Plus / Minus
Query: 10 gaattcctgctgcaggtttggtttcctttcaacaggctgtcagctcagactggctattag 69
|||||||||||||||| ||||||| ||| ||||||||||||||||| ||||||||||||
Sbjct: 664 gaattcctgctgcaggcttggtttggttttaacaggctgtcagctcaaactggctattag 605
Query: 70 cctaccaagggtgtggatctctccatctcccagaagctgagattacaggtgtaccagtag 129
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 604 cctaccaagggtgtggatctctccatctcccagaagctgagattacaggtgtgccagtag 545
Query: 130 tgggtttgcatgtgcattaaccctaaaggctcatgcttgcttagtcctcacttgatgggg 189
||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 544 tgggtttgcatgtgcattaaccctaaaggctcatgcttg-----------cttgatggga 496
Query: 190 aaatacttctagcaccatgcttgcctgtgtgtta-tagttaactctgggtaaaatgaatt 248
||||||||||||||||||||||||||||||| | ||||||||||||||||||||| |||
Sbjct: 495 aaatacttctagcaccatgcttgcctgtgtg-cagtagttaactctgggtaaaatggatt 437
Query: 249 agccttcaaattgtaaacaattgttagctagatgctcctgagtttctctggttgtg---- 304
||||||||||||||||||| |||||||||||||||||||| |||||||||||||||
Sbjct: 436 agccttcaaattgtaaacagttgttagctagatgctcctgtgtttctctggttgtggtat 377
Query: 305 --------gagccaacatggccaggttagtttccctgtttgtctggcatacaagaaagtg 356
|||||||||||||||||||||||||||||||||||||||||||| | | ||
Sbjct: 376 cgtaagtagagccaacatggccaggttagtttccctgtttgtctggcatacagggaggta 317
Query: 357 ctcagggcagaaatgcccatctagagtccctgggtaccagtgctggtttgtcaaacagag 416
||||||||||||||||| |||||||||||| ||||||||||||||||||||||||||||
Sbjct: 316 ctcagggcagaaatgccaatctagagtccccaggtaccagtgctggtttgtcaaacagag 257
Query: 417 ttgacttcatttttcctgcatatatgtgtagtatgtaccttcagaattcagatgaaggta 476
||||||||| ||||||||||| |||||||| |||||||||||||||| ||||||||||||
Sbjct: 256 ttgacttcagttttcctgcatgtatgtgtaatatgtaccttcagaatccagatgaaggta 197
Query: 477 acaagt-cctctggaattggacatcttgagttgcc--ttgtggttctatgattgaatca- 532
|||||| || |||||| ||||||||||||| |||| || | | ||||||||||||||
Sbjct: 196 acaagtacc-ctggaactggacatcttgagctgccacttattg--ctatgattgaatcac 140
Query: 533 -aggttctatggaagagcaaccagtgctcttaaccactga 571
|||| ||||| || |||||||||||||||||||||||||
Sbjct: 139 aaggtcctatgaaaaagcaaccagtgctcttaaccactga 100
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 18
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 2
Number of HSP's successfully gapped: 1
Length of query: 577
Length of database: 977
Length adjustment: 10
Effective length of query: 567
Effective length of database: 967
Effective search space: 548289
Effective search space used: 548289
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no537_a14.g1 MSMg01no537_a14.g1 CHROMAT_FILE:
MSMg01no537_a14.g1 PHD_FILE: MSMg01no537_a14.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:15:18 2005
(619 letters)
>mm_chr16_44705945_44706963
Length = 1019
Score = 1065 bits (551), Expect = 0.0
Identities = 596/611 (97%)
Strand = Plus / Plus
Query: 1 attctctgttggaaagttatatgtgaatacaactaacacaagtaaagtcatggacagtgc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 attctctgttggaaagttatatgtgaatacaactaacacaagtaaagtcatggacagtgc 260
Query: 61 ctgtggcagcttgaggggagcagagttgagttggtgtgaatgcaaaggaagacgtatagg 120
|||||||||||||||||| ||||||||||||||||||||||||||||||||| |||||||
Sbjct: 261 ctgtggcagcttgaggggggcagagttgagttggtgtgaatgcaaaggaagatgtatagg 320
Query: 121 gcagcatttaatcaggatgtaaggtgtaagcatgagtgtgtcagtgcaaagggggaatgc 180
||||||||| |||||||||||||||||||||||||| |||||||||||||||||||| ||
Sbjct: 321 gcagcatttgatcaggatgtaaggtgtaagcatgagcgtgtcagtgcaaagggggaaagc 380
Query: 181 actgtgttttgggtaagggaacaggaggaagtgcaaatatgtgtgtcagaaggggagggc 240
|||||||||||||||||| ||||||||||||||||||||||||||| |||||||||||||
Sbjct: 381 actgtgttttgggtaaggaaacaggaggaagtgcaaatatgtgtgttagaaggggagggc 440
Query: 241 acctgcaagtgtgttcatagcaggagcccttgaatagagctggaagcaattatcaatgga 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 acctgcaagtgtgttcatagcaggagcccttgaatagagctggaagcaattatcaatgga 500
Query: 301 gggaggtttgcaccactgtggctcttcatggggagtcaactttgtccctcaggggacttt 360
||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 501 gggaggtttgcaccactgtggttcttcatggggagtcaactttgtccctcaggggacttt 560
Query: 361 tttgacagcgtctccacatgtttttaaatgggcacagctagggtaaaagctagaaagaca 420
|||||||| |||||||||||||||||| |||||||||||||||||||||| |||||||||
Sbjct: 561 tttgacagtgtctccacatgtttttaagtgggcacagctagggtaaaagccagaaagaca 620
Query: 421 ttgtatgtccttcaatgaacaggatatcaaaacagacttccatcaaaatgtgaatggtac 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 ttgtatgtccttcaatgaacaggatatcaaaacagacttccatcaaaatgtgaatggtac 680
Query: 481 cagggtttagaaactctaaaaagaaagtgagaaatcagtaagaaaaagaaagaaaagaga 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 cagggtttagaaactctaaaaagaaagtgagaaatcagtaagaaaaagaaagaaaagaga 740
Query: 541 cagataggcagatagatagatagatagatagatagatagatagatagatagatagataga 600
||||||||||||||||||||||||||||||||||||||||||||||||| ||| ||| ||
Sbjct: 741 cagataggcagatagatagatagatagatagatagatagatagatagatggatggatgga 800
Query: 601 tagatggatgg 611
| |||||||||
Sbjct: 801 tggatggatgg 811
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 67
Number of extensions: 20
Number of successful extensions: 20
Number of sequences better than 10.0: 1
Number of HSP's gapped: 19
Number of HSP's successfully gapped: 1
Length of query: 619
Length of database: 1019
Length adjustment: 10
Effective length of query: 609
Effective length of database: 1009
Effective search space: 614481
Effective search space used: 614481
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
