Query= MSMg01no539_c12.b1 MSMg01no539_c12.b1 CHROMAT_FILE:
MSMg01no539_c12.b1 PHD_FILE: MSMg01no539_c12.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:18:00 2005
(697 letters)
>mm_chr16_71070661_71071757
Length = 1097
Score = 1131 bits (585), Expect = 0.0
Identities = 609/623 (97%), Gaps = 10/623 (1%)
Strand = Plus / Minus
Query: 5 gaattcctggcttctataagttctcagagacttcttacatacacagtatcccttgtggtt 64
||||||||||| |||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 623 gaattcctggcctctataagttctcagagacttcttacatgcacagtatcccttgtggtt 564
Query: 65 tcttctatccctcctctgcagctgctgtttgtgtgctttctatcattctctgatttagca 124
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 563 tcttctatccctcctctgcagctgctgcttgtgtgctttctatcattctctgatttagca 504
Query: 125 gatggagaaattaaaaaataatgaattcatagagtttaacccatcacagtaatgaagttt 184
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 503 gatggagaaattaaaaaataatgaattcatagagtttaacccattacagtaatgaagttt 444
Query: 185 cacataaatactccttaaaccaaaatacaatatgctctattggcacaaaggacacagtaa 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 443 cacataaatactccttaaaccaaaatacaatatgctctattggcacaaaggacacagtaa 384
Query: 245 acctcagaaaaggaagccagcatctcttctatgtgtattactactaagtagccaaatagc 304
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 383 acctcagaaaaggaagccagcatctcttctatgtgtattactactaagtagccaaatagc 324
Query: 305 atttgagacttgctatatatttttcctttgctaattagaattggctactatatgtacatt 364
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 323 atttgagacttgctatatatttttcctttgctaattagaattggctactatatgtacatt 264
Query: 365 aatacataattggtaattccaaaacatcagtcatactgaatacatatattctttgataaa 424
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 263 aatacataattggtaattccaaaacatcagtcatactgaatacatatattctttgataaa 204
Query: 425 cagacaa----------acacacacacacacacacacacacatgattgtaggtaatattc 474
||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 203 cagacaaacacacacacacacacacacacacacacacacacatgattgtaggtaatattc 144
Query: 475 acacaaaaatagttaactattagggaaatcatttgctctatttataatgtttcaaagaat 534
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 143 acacaaaaatagttaactattagggaaatcatttgctctatttataatgtttcaaagaat 84
Query: 535 tcattagattgaaatataaaataggttcaactcaaaatttgagattcaactaataacaca 594
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 83 tcattagattgaaatataaaataggttcaactcaaaatttgagattcaactaataacaca 24
Query: 595 atgctcagggagatgaagtgccc 617
|||||||||||||||||||||||
Sbjct: 23 atgctcagggagatgaagtgccc 1
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 42
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 697
Length of database: 1097
Length adjustment: 10
Effective length of query: 687
Effective length of database: 1087
Effective search space: 746769
Effective search space used: 746769
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no539_c12.g1 MSMg01no539_c12.g1 CHROMAT_FILE:
MSMg01no539_c12.g1 PHD_FILE: MSMg01no539_c12.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:18:00 2005
(143 letters)
>mm_chr16_70931842_70932384
Length = 543
Score = 269 bits (139), Expect = 6e-77
Identities = 142/143 (99%)
Strand = Plus / Plus
Query: 1 atcactacaatgtaactgatttgcaaatgtcgtatccttatgtatagccctccaatattt 60
|||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 201 atcactacaatgtaactgatttgcaaatgtcgtatctttatgtatagccctccaatattt 260
Query: 61 aattttctttatgctgtaagaacacaatttgaggttaaaaacaataatccttcattaaga 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 aattttctttatgctgtaagaacacaatttgaggttaaaaacaataatccttcattaaga 320
Query: 121 gaatttaccctggcattaatcag 143
|||||||||||||||||||||||
Sbjct: 321 gaatttaccctggcattaatcag 343
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 6
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 143
Length of database: 543
Length adjustment: 8
Effective length of query: 135
Effective length of database: 535
Effective search space: 72225
Effective search space used: 72225
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
