Query= MSMg01no540_l01.b1 MSMg01no540_l01.b1 CHROMAT_FILE:
MSMg01no540_l01.b1 PHD_FILE: MSMg01no540_l01.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:20:03 2005
(655 letters)
>mm_chr16_75439010_75440064
Length = 1055
Score = 1243 bits (643), Expect = 0.0
Identities = 649/651 (99%)
Strand = Plus / Plus
Query: 5 gaattcacaatgcttaaatcctaagttctatctcaatattttagactattgtattaaata 64
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattcacaatgcttaaatcctaagttctatctcaatattttagactattgtattaaata 264
Query: 65 aatcatcctgtattaaatagtgcttcattccaatcatgtggtctcatcaattcctccatg 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 aatcatcctgtattaaatagtgcttcattccaatcatgtggtctcatcaattcctccatg 324
Query: 125 tgcttgcaaaaatctctttgtagtgtactgatcaactattttatacaatttatcccaatt 184
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 325 tgcttgcaaaaatctctttgtagtgtactgatcaactattttatacaatttaccccaatt 384
Query: 185 acatttcccatgtctttgctatttctttttatagaatctttgcaagttgggttttgattg 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 acatttcccatgtctttgctatttctttttatagaatctttgcaagttgggttttgattg 444
Query: 245 attgaaaatatgttttactcctgtcctttaaaaagtcgctacgctacttgcttttacaaa 304
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 445 attgaaaatatgttttactcctgtcctttaaaaagtcgctacgctacttgcttttacaaa 504
Query: 305 atgtataatgataacatccagtcagtcttatgatttactagagaaaaaattaataacagc 364
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 505 atgtataatgataacatccagtcagtcttatgatttactagagaaaaaattaataacagc 564
Query: 365 ctcacttgctacacatactacccttgatgtaggatatggataatgagtgagagacagttg 424
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 565 ctcacttgctacacatactacccttgatgtaggatatggataatgagtgagagacagttg 624
Query: 425 gtggcatgagcaacaagaggaagatcaccatcagctctccacttggagacatgtccacac 484
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 625 gtggcatgagcaacaagaggaagatcaccatcagctctccacttggagacatgtccacac 684
Query: 485 acacttccttccgcaactgaagtaacaccatatgttctcagtgaattgggtggtgagagt 544
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 685 acacttccttccgcaactgaagtaacaccatatgttctcagtgaagtgggtggtgagagt 744
Query: 545 gacagttggcctgctaaagagggccatgtgtacaggcagcctaccaccatccttcttact 604
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 745 gacagttggcctgctaaagagggccatgtgtacaggcagcctaccaccatccttcttact 804
Query: 605 gatgatggctgaaaactcagttgaagtatttgctcatcagaataacatggc 655
|||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 805 gatgatggctgaaaactcagttgaagtatttgctcatcagaataacatggc 855
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 34
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 655
Length of database: 1055
Length adjustment: 10
Effective length of query: 645
Effective length of database: 1045
Effective search space: 674025
Effective search space used: 674025
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no540_l01.g1 MSMg01no540_l01.g1 CHROMAT_FILE:
MSMg01no540_l01.g1 PHD_FILE: MSMg01no540_l01.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:20:03 2005
(617 letters)
>mm_chr16_75495555_75496572
Length = 1018
Score = 1187 bits (614), Expect = 0.0
Identities = 617/618 (99%), Gaps = 1/618 (0%)
Strand = Plus / Minus
Query: 1 tcactacaaggggctttttccttaaagaacgttaactctccctcacctggcagctatcaa 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 903 tcactacaaggggctttttccttaaagaacgttaactctccctcacctggcagctatcaa 844
Query: 61 ttccaaatcactccttattgttaggttattagagtattcaatacactcattggaaccttc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 843 ttccaaatcactccttattgttaggttattagagtattcaatacactcattggaaccttc 784
Query: 121 tattttttctttaattttaatcttagaaaattcatgtctcagttgacaacaatgtcacaa 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 783 tattttttctttaattttaatcttagaaaattcatgtctcagttgacaacaatgtcacaa 724
Query: 181 gattaataataattatgcctttgcacattttcatcaatagattgataattaaacaatgaa 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 723 gattaataataattatgcctttgcacattttcatcaatagattgataattaaacaatgaa 664
Query: 241 tacattttaattatcataaaacaaatcatgaaatgcctaatgtatatttttgtgcccctt 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 663 tacattttaattatcataaaacaaatcatgaaatgcctaatgtatatttttgtgcccctt 604
Query: 301 aaaaattctctcccctaacaggctgcatgaatccctgagtaattgtatataattttaatg 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 603 aaaaattctctcccctaacaggctgcatgaatccctgagtaattgtatataattttaatg 544
Query: 361 atgactctaattagctcaaaacattttggtggtgaacacttatgaagtacattgtaaatg 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 543 atgactctaattagctcaaaacattttggtggtgaacacttatgaagtacattgtaaatg 484
Query: 421 aaaataaacttcagcagtaatggctttt-aaaaaaatattttcctaattagaattgctga 479
|||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 483 aaaataaacttcagcagtaatggcttttaaaaaaaatattttcctaattagaattgctga 424
Query: 480 tttttctaagaattgaaggtccccgtttgtctttccctttcaattttggttcacagaaac 539
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 423 tttttctaagaattgaaggtccccgtttgtctttccctttcaattttggttcacagaaac 364
Query: 540 atcttatcataaagagtcaaaggctatttgatcattaatgaggtcactttcacacttcta 599
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 363 atcttatcataaagagtcaaaggctatttgatcattaatgaggtcactttcacacttcta 304
Query: 600 aataattgcacgcgacac 617
||||||||||||||||||
Sbjct: 303 aataattgcacgcgacac 286
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 33
Number of extensions: 3
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 617
Length of database: 1018
Length adjustment: 10
Effective length of query: 607
Effective length of database: 1008
Effective search space: 611856
Effective search space used: 611856
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
