Query= MSMg01no542_m18.b1 MSMg01no542_m18.b1 CHROMAT_FILE:
MSMg01no542_m18.b1 PHD_FILE: MSMg01no542_m18.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:22:57 2005
(649 letters)
>mm_chr16_83222714_83223762
Length = 1049
Score = 1208 bits (625), Expect = 0.0
Identities = 640/645 (99%)
Strand = Plus / Minus
Query: 5 gaattcttatatgtaggttttgttacagcattgctgcttttctggtcctccaggcacact 64
||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 849 gaattcttatatgtaggttttgtcacagcattgctgcttttctggtcctccaggcacact 790
Query: 65 gatggacattttgttccatgctttcaaaggctgaagctatgttataaaaaattcagagat 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 789 gatggacattttgttccatgctttcaaaggctgaagctatgttataaaaaattcagagat 730
Query: 125 atcagtttctggtttgtgtaacctatagcttatttcctgtaatagtgtccattgttctcc 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 729 atcagtttctggtttgtgtaacctatagcttatttcctgtaatagtgtccattgttctcc 670
Query: 185 atcttcttcgttcttagagaccatttacaaattatctttatgttctcaacactagatcta 244
|||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 669 atcttctttgtttttagagaccatttacaaattatctttatgttctcaacactagatcta 610
Query: 245 tgcactgccattcccaaagttgcattttagctttaccatagttcatatttccaaacaaaa 304
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 609 tgcactgccattcctaaagttgcattttagctttaccatagttcatatttccaaacaaaa 550
Query: 305 gtttttctggttgaattcctggggaggatgcatacttggcagacatctagttcatttgtc 364
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 549 gtttttctggttgaattcctggggaggatgcatacttggcagacatctagttcatttgtc 490
Query: 365 tgaagcctctgtgtcaatagtctcgcaatctcttaggagctttgcttcttctggttgtac 424
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 489 tgaagcctctgtgtcaatagtctcgcaatctcttaggagctttgcttcttctggttgtac 430
Query: 425 agtgggcattcaaacatgttaagttattatgtgaataatctcagatataaaaccaaacat 484
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 429 agtgggcattcaaacatgttaagttattatgtgaataatctcagatataaaaccaaacat 370
Query: 485 aaaaacaaaaatgttgtttatccacaccgagtttactgagagtcactttacagtgagcct 544
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 369 aaaaacaaaaatgttgtttatccacaccgagtttactgagagtcactttacagtgagcct 310
Query: 545 gaggaaatgaagagcaacaaaccaagaagaatgatgttttcaaacctacacaactcttac 604
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 309 gaggaaatgaagagcaacaaaccaagaagaatgatgttttcaaacctacagaactcttac 250
Query: 605 aggctttcattgtctttctgcctacatttgtctttattgagccct 649
|||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 249 aggctttcattgtctttctgcctacatttgtctttattgagccct 205
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 28
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 649
Length of database: 1049
Length adjustment: 10
Effective length of query: 639
Effective length of database: 1039
Effective search space: 663921
Effective search space used: 663921
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no542_m18.g1 MSMg01no542_m18.g1 CHROMAT_FILE:
MSMg01no542_m18.g1 PHD_FILE: MSMg01no542_m18.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:22:57 2005
(612 letters)
>mm_chr16_83153169_83154180
Length = 1012
Score = 1114 bits (576), Expect = 0.0
Identities = 604/614 (98%), Gaps = 2/614 (0%)
Strand = Plus / Plus
Query: 1 ttttcaaaataaactgtactaacagagtacagggcctggaagagagaatctcagacattg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 199 ttttcaaaataaactgtactaacagagtacagggcctggaagagagaatctcagacattg 258
Query: 61 aagatgaaataaaatgaatgaatacattcatcaaaaatgtaaaataagaaacaagtcctg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 259 aagatgaaataaaatgaatgaatacattcatcaaaaatgtaaaataagaaacaagtcctg 318
Query: 121 ctataaaatgtccaggaaatgtgggacactattaaaagaccaagcctaagaataataggt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 319 ctataaaatgtccaggaaatgtgggacactattaaaagaccaagcctaagaataataggt 378
Query: 181 atagatgaaggagaattccagctcaaaggctcagaaaactttttcaacaaaatcacaaaa 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 379 atagatgaaggagaattccagctcaaaggctcagaaaactttttcaacaaaatcacaaaa 438
Query: 241 gagagatatcctaatctaaagacagagatacaggtacaggaagcatgaagaacattaaac 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 439 gagagatatcctaatctaaagacagagatacaggtacaggaagcatgaagaacattaaac 498
Query: 301 agattggaccagaaaagaatctctcctcaccatataataatcaaagcatgaacatataga 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 499 agattggaccagaaaagaatctctcctcaccatataataatcaaagcatgaacatataga 558
Query: 361 acaa--agaaggactattaaaaactaaaagggaaaatgctaagtaacatacaaaggcaga 418
|||| | |||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 559 acaataataaggactattaaaagctaaaagggaaaatgctaagtaacatacaaaggcaga 618
Query: 419 cccactaaaattgcagcctagactactgccaggagcctcccagcctagaaagggtagtga 478
|||||||||||||||||||||| ||||||||||||||||||||||| || ||||||||||
Sbjct: 619 cccactaaaattgcagcctagaatactgccaggagcctcccagccttgagagggtagtga 678
Query: 479 cagagataaagattaggactctggagtggctttaatgtctgagggtctcccaaaaatgtt 538
||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 679 cagggataaagattaggactctggagtggctttaatgtctgagggtctcccaaaaatgtt 738
Query: 539 ctaggtctctaattacactgaaaggctgataataacttctaaaaagtcctaaatatttgt 598
|| ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 739 ctcggtctctaactacactgaaaggctgataataacttctaaaaagtcctaaatatttgt 798
Query: 599 cttgctttttctga 612
||||||||||||||
Sbjct: 799 cttgctttttctga 812
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 29
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 612
Length of database: 1012
Length adjustment: 10
Effective length of query: 602
Effective length of database: 1002
Effective search space: 603204
Effective search space used: 603204
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
