TCTATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGA
ATTCAGAGGCTAAGGGTTTGTATTCAAGCTGACTTATGTACCAGATAGGC
AGACTCAAAGTAATGTGTTTGCTTCCTAGAGGTAGGCAGCTGAGAAAAAC
ACAAAGAACAATCAGGAGTGAATGGTACCAAGTACAATATTTCTGTGACT
AGGAAGCTGGAGTAATTTAACACTTTTAACAATAAGGCTGTCTGGGATGC
ACTTTGGGGGTGTCTCACATCCTATTATGTTACACTATCAAAACTGCAAG
AATTGTGAATGCTATGCCATTACCATTTACACAGATAAGCTCCTGAATTA
TTTGTATGGGGAATATGAGCCACTTGCTTATCTTGCTGATAAGGAGAGAA
GACAGGTGGGGAGTGTCTGGGAGACAGACAGTTGTGGGGACTTCTCTGTC
TGGCTTGCAAAAGTGCCACTCTTTGAGATGCTATGATTGACTGACGCACT
GATAGTAACAGCACATCTGCAGTATGAAATGCTTCGAATATGATAAATAG
CTCGAGCTGCACCCTGAGTATAAATGAACAATATAAGTAAACAACATGTA
AACGAAAGAAAGCTAAATTAAAAATGAGAGGAGGTTAATGACATTCACTT
ATATTTAAATGTATAAAGCTTATTGTAGGTACTAGACATTAATCCTCTTG
TTTTCCTATCCTTGATCAGCTAGTTAGTTAACAGAAAGGATCAAGCTATA
GCTCAAAGGTAAGAATATTTACTN

CAATGCXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXTCACCTGAGGAATACCGAATGGCAG
AGAAGCACTTGAAAAAATGTTCAACATCCTTAATCATCAGGGAAATGCAA
ATCTAAACAACCCTGAGATTCCACCTCACACCAGTCAGAATGGCTAAGAT
CAAAAATTCAGGTGACAGCAGATGCTGGCGAGGATGTGGAGAAAGAGGAA
CACTCCTCCATTGTTGGTGGGAGTGCAGGCTTGTACAACCACTCTGGAAA
TCAGTCTGGCGGTTCCTCAGAAAACTGGACATAGTACTACCGGAGGATCC
AGCAATACCTCTCCTGGGCATATATCCAGAAGATGCCCCAACAGGTAAGA
AGGACACATGCTCCACTATGTTCATAGCAGCCTTATTTATAATAGCCAGA
AGCTGGAAAGAACCTAGATGCCCCTCAACAGAGGAATGGATACAGAAAAT
GTGGTACATCTACACAATGGAGTACTACTCAGCTATTAAAAAGAATGAAT
TTATGAAATTCCTAGCCAAATGGATGGACCTGGAGGGCATCATCCTGAGT
GAGGTAACACATTCACAAAGAAACTCACACAATATGTATTCACTGATAAG
TGGATATTAGCCCCAAACCTAGGATACCCAAGATATAAGATATAATTTGC
TAAACACATGAAACTCAAGAAGAATGAAGACTNGAGTGTGGACACTATGC
CCCCTCCTAGANTTGGGAACAAN

Query= MSMg01no542_n07.b1 MSMg01no542_n07.b1 CHROMAT_FILE:
MSMg01no542_n07.b1 PHD_FILE: MSMg01no542_n07.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:22:59 2005
         (685 letters)



>mm_chr16_41570253_41571337
          Length = 1085

 Score = 1317 bits (681), Expect = 0.0
 Identities = 681/681 (100%)
 Strand = Plus / Minus

                                                                       
Query: 5   gaattcagaggctaagggtttgtattcaagctgacttatgtaccagataggcagactcaa 64
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 885 gaattcagaggctaagggtttgtattcaagctgacttatgtaccagataggcagactcaa 826

                                                                       
Query: 65  agtaatgtgtttgcttcctagaggtaggcagctgagaaaaacacaaagaacaatcaggag 124
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 825 agtaatgtgtttgcttcctagaggtaggcagctgagaaaaacacaaagaacaatcaggag 766

                                                                       
Query: 125 tgaatggtaccaagtacaatatttctgtgactaggaagctggagtaatttaacactttta 184
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 765 tgaatggtaccaagtacaatatttctgtgactaggaagctggagtaatttaacactttta 706

                                                                       
Query: 185 acaataaggctgtctgggatgcactttgggggtgtctcacatcctattatgttacactat 244
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 705 acaataaggctgtctgggatgcactttgggggtgtctcacatcctattatgttacactat 646

                                                                       
Query: 245 caaaactgcaagaattgtgaatgctatgccattaccatttacacagataagctcctgaat 304
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 645 caaaactgcaagaattgtgaatgctatgccattaccatttacacagataagctcctgaat 586

                                                                       
Query: 305 tatttgtatggggaatatgagccacttgcttatcttgctgataaggagagaagacaggtg 364
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 585 tatttgtatggggaatatgagccacttgcttatcttgctgataaggagagaagacaggtg 526

                                                                       
Query: 365 gggagtgtctgggagacagacagttgtggggacttctctgtctggcttgcaaaagtgcca 424
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 525 gggagtgtctgggagacagacagttgtggggacttctctgtctggcttgcaaaagtgcca 466

                                                                       
Query: 425 ctctttgagatgctatgattgactgacgcactgatagtaacagcacatctgcagtatgaa 484
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 465 ctctttgagatgctatgattgactgacgcactgatagtaacagcacatctgcagtatgaa 406

                                                                       
Query: 485 atgcttcgaatatgataaatagctcgagctgcaccctgagtataaatgaacaatataagt 544
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 405 atgcttcgaatatgataaatagctcgagctgcaccctgagtataaatgaacaatataagt 346

                                                                       
Query: 545 aaacaacatgtaaacgaaagaaagctaaattaaaaatgagaggaggttaatgacattcac 604
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 345 aaacaacatgtaaacgaaagaaagctaaattaaaaatgagaggaggttaatgacattcac 286

                                                                       
Query: 605 ttatatttaaatgtataaagcttattgtaggtactagacattaatcctcttgttttccta 664
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 285 ttatatttaaatgtataaagcttattgtaggtactagacattaatcctcttgttttccta 226

                                
Query: 665 tccttgatcagctagttagtt 685
           |||||||||||||||||||||
Sbjct: 225 tccttgatcagctagttagtt 205


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 34
Number of extensions: 2
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 685
Length of database: 1085
Length adjustment: 10
Effective length of query: 675
Effective length of database: 1075
Effective search space:   725625
Effective search space used:   725625
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)