GGCCAGTCTTATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXCGCGGAATTCCACAGCAGCTTTTAGTTGTGCAAAGATAAATCACTCCT
GGTCCAAGTGGTAAGCCACAGAAATAACAGCAATTTATACATACCCTTCA
GGAGTCCCTTGTGAGAACTCCTCCACTATTTATGAGGTGTGGTGACGAAT
GTTAAAAGCAAGGGTGGGGGTGGAAGCTTTATATTATTACCTACCTCACA
CCACCAAAGAACTCTACATGGAAATGTTTATTGGGAATACAGTTTGTTAG
GAAGCCATCAAGACAAGACATTTATCATGGACAGGAAGCAGACGATCCCC
ACAAAGCTGCAGTGACATTTTTAATACTGGCTGAACATTTCTCAATCGGA
GCAAACAGACTCTTTTTCAATCTTTTCAAATCACTTCCCAGCTTATGGTG
CAAATCATTGCGACGACTCTAGTAGAATAATAGAAATAACTCCTCCGTTG
GGGTTTACACTGGGGAATATGGGAAACATGGTGTCTTAGTTATTTTCTGC
TTCTGTGTTGAAATCTCCTGATAAAAGCACCTTAAGGATGGAAGGGTTCA
TTGTGGCCCCCAGTTCATGCTGGGGAAGTCAAGGTGCTTGAAGCAGCCGT
CAAACTGTGTCTGTGTTAGGAGAGGGAAAGCCACTTACTCTTGGTGTCAC
TGTCTCCTTTCTGTACAGTCAGGACCCAGTCCAGGGAATGGTGTTGTCCT

NTTTTGTCGATGCXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTTTTTCATAGCCATTTTC
TTAGTCTTGTCTTTTTATTGGGGAATTTGAATCCATTGATATTGAGAGAT
GTCAATGACCAGTGATTGCTAATTCCTGTTATTTTATTGTTAGTAGTGGT
GGTTTTGTGTGTGTGTGTGTGTGTGTGTNCNCCTTTCCCTTCATTTCNTT
TTGCTGATGTGTAATTATTGATTTCTTGTATTTTCATATGTGTAGCTAAC
ATCCTTGGATTGGAGTTTTCCTTGGAATATCTTCTTTTTGGGCAGATTGC
AAATAGATAAATTTGTTGATATATTGCCGCTTCAACATTACGTTATTGAG
GAATATCTTGTTTTCTTCTACTATGTCCACCCACAAGTTTTGCTGTGTAT
ATTATTCTGTTTCGGCATATGTCTTTCTTTCCATTTTGCATGACATTCAC
CAAGCCCTTTTTGGCTTTTGAGCTCTCTTGTTTATCTCACGTTCTCTTTC
ACGTCCGCTCTTTACACGCTTTCCTGTTATTTCCATCCTTTAATTTCCAA
TCAAACTTACTTTCACCTGCCTTGTTGATAGCCCTTAGATTTCTCACTGC
TTTAGAACCACATCTCTCTTCGCGCATTCTTCTCTTTTTTGTGTTTTAAC
CCTTTCTATTTGCCTCCGCCCCAAATCTTGCATATTATACCCTCACCCAC
CCTTCCTATTTCTTTT

Query= MSMg01no544_d22.b1 MSMg01no544_d22.b1 CHROMAT_FILE:
MSMg01no544_d22.b1 PHD_FILE: MSMg01no544_d22.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:24:50 2005
         (591 letters)



>mm_chr16_9242890_9243880
          Length = 991

 Score = 1104 bits (571), Expect = 0.0
 Identities = 586/591 (99%)
 Strand = Plus / Plus

                                                                       
Query: 1   ttgtgcaaagataaatcactcctggtccaagtggtaagccacagaaataacagcaattta 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 ttgtgcaaagataaatcactcctggtccaagtggtaagccacagaaataacagcaattta 260

                                                                       
Query: 61  tacatacccttcaggagtcccttgtgagaactcctccactatttatgaggtgtggtgacg 120
           |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 261 tacatacccttcaggagtcccttgtgagaactcctccagtatttatgaggtgtggtgacg 320

                                                                       
Query: 121 aatgttaaaagcaagggtgggggtggaagctttatattattacctacctcacaccaccaa 180
           |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 321 aatgttaaaagcaagggtggggttggaagctttatattattacctacctcacaccaccaa 380

                                                                       
Query: 181 agaactctacatggaaatgtttattgggaatacagtttgttaggaagccatcaagacaag 240
           |||||| ||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 381 agaactttacatggaaatgtttattgggaatacagtttgttaggaagctatcaagacaag 440

                                                                       
Query: 241 acatttatcatggacaggaagcagacgatccccacaaagctgcagtgacatttttaatac 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 acatttatcatggacaggaagcagacgatccccacaaagctgcagtgacatttttaatac 500

                                                                       
Query: 301 tggctgaacatttctcaatcggagcaaacagactctttttcaatcttttcaaatcacttc 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 tggctgaacatttctcaatcggagcaaacagactctttttcaatcttttcaaatcacttc 560

                                                                       
Query: 361 ccagcttatggtgcaaatcattgcgacgactctagtagaataatagaaataactcctccg 420
           | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 caagcttatggtgcaaatcattgcgacgactctagtagaataatagaaataactcctccg 620

                                                                       
Query: 421 ttggggtttacactggggaatatgggaaacatggtgtcttagttattttctgcttctgtg 480
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 ttggggtttacactggggaatatgggaaacatggtgtcttagttattttctgcttctgtg 680

                                                                       
Query: 481 ttgaaatctcctgataaaagcaccttaaggatggaagggttcattgtggcccccagttca 540
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 ttgaaatctcctgataaaagcaccttaaggatggaagggttcattgtggcccccagttca 740

                                                              
Query: 541 tgctggggaagtcaaggtgcttgaagcagccgtcaaactgtgtctgtgtta 591
           |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 741 tgctggggaagtcaaggtgcttgaagcagccgtcaaactgtgtctgtgtta 791


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 27
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 591
Length of database: 991
Length adjustment: 10
Effective length of query: 581
Effective length of database: 981
Effective search space:   569961
Effective search space used:   569961
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)