Query= MSMg01no544_i18.b1 MSMg01no544_i18.b1 CHROMAT_FILE:
MSMg01no544_i18.b1 PHD_FILE: MSMg01no544_i18.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:25:15 2005
(595 letters)
>mm_chr16_60361477_60362471
Length = 995
Score = 1100 bits (569), Expect = 0.0
Identities = 587/593 (98%)
Strand = Plus / Minus
Query: 1 attacaagtagtcatagcaaattagccatacaacttttagatccatacaggatgatatac 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 793 attacaagtagtcatagcaaattagccatacaacttttagatccatacaggatgatatac 734
Query: 61 aagccactgctggaaagcacacaggtatatactggtcacacatggtgggcagcaggcaca 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 733 aagccactgctggaaagcacacaggtatatactggtcacacatggtgggcagcaggcaca 674
Query: 121 catgcagaccagaaatcaggccacgagtaagcatacacgattataccagttggctggcaa 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 673 catgcagaccagaaatcaggccacgagtaagcatacacgattataccagttggctggcaa 614
Query: 181 aaggcactgaactctgaccccaggacacatttatataatacctgatgaaagtagcatttt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 613 aaggcactgaactctgaccccaggacacatttatataatacctgatgaaagtagcatttt 554
Query: 241 ttccaaatatagtggtataatgattatacctgattgcttgtaattccccagatgtcatat 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 553 ttccaaatatagtggtataatgattatacctgattgcttgtaattccccagatgtcaaat 494
Query: 301 gccaactacctttcgctgacttacttgtgtcagatgccagggccatgtgtattttaactc 360
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 493 gccaactacctttcgctgacttacttgtgtcagatgccagggccatgtgtattttagctc 434
Query: 361 attcatcctgtatatccttatcagtgccctgttttctgaatctaattgtatcttacaacc 420
| || |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 433 actcgtcctgtatatccttatcagtgccctgttttctgaatctaattgtatcttacaacc 374
Query: 421 tcctgttacatacaaagcctataagatagatattctgcctataatatagatattctaatc 480
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 373 tcctgttacatacaaagcctataagatagatattctgcctataatgtagatattctaatc 314
Query: 481 ttttaaaaatgttctcaaattcattttcaatattagattttaaataatgtggattttaat 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 313 ttttaaaaatgttctcaaattcattttcaatattagattttaaataatgtggattttaat 254
Query: 541 ttatatgatataacaatataggattaatgtagattttttaaacacatataata 593
|||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 253 ttatatgatataacaatataggattaatgtagatttcttaaacacatataata 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 29
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 595
Length of database: 995
Length adjustment: 10
Effective length of query: 585
Effective length of database: 985
Effective search space: 576225
Effective search space used: 576225
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no544_i18.g1 MSMg01no544_i18.g1 CHROMAT_FILE:
MSMg01no544_i18.g1 PHD_FILE: MSMg01no544_i18.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:25:15 2005
(626 letters)
>mm_chr16_60198490_60199515
Length = 1026
Score = 1122 bits (580), Expect = 0.0
Identities = 616/630 (97%), Gaps = 4/630 (0%)
Strand = Plus / Plus
Query: 1 acaatgaaaggatgagccccaggcagactgcagactatacttaactgtcatccagcagca 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 197 acaatgaaaggatgagccccaggcagactgcagactatacttaactgtcatccagcagca 256
Query: 61 gtgatggggctattgaacatacattttgagaaggtaaagaacttgacaatttgcctctga 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 257 gtgatggggctattgaacatacattttgagaaggtaaagaacttgacaatttgcctctga 316
Query: 121 taataattgatttaatgtcccgttatcaacattagcagaagcaatgaagtgcatttcttt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 317 taataattgatttaatgtcccgttatcaacattagcagaagcaatgaagtgcatttcttt 376
Query: 181 cactttgaacgtgctttcacatgttagagtttctataaacacaatatgcttcttcttgac 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 377 cactttgaacgtgctttcacatgttagagtttctataaacacaatatgcttcttcttgac 436
Query: 241 tgccaatgatgaatactttactttgctaatttctatctaagaaatattttgtattgaatt 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 437 tgccaatgatgaatactttactttgctaatttctatctaagaaatattttgtattgaatt 496
Query: 301 gtacattttattgattaattgattgactggttgatt----tttaccatgaattgaaaatt 356
|||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 497 gtacattttattgattaattgattgactggttgattgatttttaccatgaattgaaaatt 556
Query: 357 aaaaatagccgggtgtggtggcgcacgcatttaatcccagcacttgggaggcagaggcag 416
|||||||||||| ||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 557 aaaaatagccggatgtggtggcgcacgcctttaatcccagcacttgggaggcagaggcag 616
Query: 417 gcagatttctgagttcgaggccagcctggtctacagagtgagttccaggacagccagagc 476
| ||||||||||||| |||||||||||||||||| ||||||||||||||||||||| ||
Sbjct: 617 gtggatttctgagttcaaggccagcctggtctacacagtgagttccaggacagccagggc 676
Query: 477 tacacagagaaactctgtctcaaaaaaccaaaaaccaaaaaccaacaaaagaagaaaatt 536
||||||||||||||||||||||||||||||||||||||||| |||||||| |||||||||
Sbjct: 677 tacacagagaaactctgtctcaaaaaaccaaaaaccaaaaaacaacaaaaaaagaaaatt 736
Query: 537 aaaaatattctttttgttgttggtttcttgttttgcttccataatgaaacacttttatgg 596
| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 737 agaaatattctttttgttgttggtttcttgttttgcttccataatgaaacacttttatgg 796
Query: 597 tacatttaagtaagtaaggtatgaaaaaaa 626
||||||||||||||||||||||||||||||
Sbjct: 797 tacatttaagtaagtaaggtatgaaaaaaa 826
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 25
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 626
Length of database: 1026
Length adjustment: 10
Effective length of query: 616
Effective length of database: 1016
Effective search space: 625856
Effective search space used: 625856
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
