CTATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGG
AATTCTCATGGGCATAAAATCAATGAATTATCTTTTCCATTTGTGATGTT
GGAAGTTTCTCATAATCACATTCACTAACGTTGTTATAGTTGATATATGT
TGGAGGGACATTGGAGCATTTTAAATATCTCACACATAGAGCTTTAAATA
TGTACAAACCAGACAAATGTGAAAGACAAAAGTGCTGGAGAAAACACGTG
AGTGTGGGAAACCCTTGCCTGAAGGATCCTGTTTGCAACTGCTTTAGAAT
GCAACTGATACATGTCATGATATTTGAGGTAAGTGTTTTAATATAGGAAA
AAGAAGAGTGCCTAATTAAGTTTATGTATATCTTATATGAAGTTCAGGAT
ACAGTGACTTTAGGAAAAGCCATAAGTAAGTGATGAGTACATTAAAGAGT
AGTTTTAGAGAAAAAAATATTTAAGGTAGAGTGGGCATCAGTGCACAGAT
CTAAATTTGAAAAATCTGTTATGGTGGTGAGAACCTACTATGATGAATAC
AGTGTGAGATACATGAATATAGGAGGAGGTAGCAGTGGTAGGTAAAGAAG
CAAGAAAAAGAGATAGGATAATGAAATTGCTTAGAAACTTTTGTTTTGGT
ATATCTTAAGGAAAGCTTTTACTATAATCTGCCTTAATTTTTTATTAGAT
ATTTTCTTCATTTACACTTCAAATGCTATCCTGAAAGTCCTN

GCCGCGAGGACGAGCGACCGACCTTGGCCGCCCACCTTTTCCCATGCCCC
GCAGTGCTAGCCGCATCATCAGTGAGGATATTGTTGTTACTGCTACATGA
GAACGCCACNTATGACTTCTGATGATCAACCCCACACTTCTTCCCTGTCG
GTACGTCCACGAAATTCTCTAGCTCGCCCATTATCCGGTCGCTCACCGTT
TTAGCTATAATTTTNTATTNATTATTTTTGGGGGGCCCCCCCCCCTATAA
AAAAAAAGGATGGGGACCCCCCCATTTAATAAAAAATNTNGGGGGGGGGG
GGTTAAGGGGNCCCCCGTGGGGGGGCCGGGGGGGCCCCCCGTCCCCCTTG
GGNGGATCCCCCGGGTTTTCCCCCCCCCCAATTTTTTTAAAGGGGTGGGN
AACCCCCTTAATTAGGAAAAGGGAATCCCGNCGGGCCAAATTTCCCTNNT
TTTTCCTCGTTCCATTTGGTTTGGAAATGGTTTTGGTTAAGGAATATTCC
ACCCAGGCACCAGTTTCCAATAACCAGGGGGCCGGTTCCTCTTGCCCTGG
ATTGGACCTTTGGCCCAAATTTACCCGGAAACCAAAAAATAATTTTTTGG
GCCCAAGGGGGTCCCCCAATCCAAGGGCCCGGGTGGGGGATTTTACCCAG
GGCCAAAACCCAAAAAACCCTAAAGGTTTCACCCCCAAAAAAGGTGCCCG
AGAAAAAAAAAAAAAACCCTCCGGGGGGCCCATTATTTGGGAAAAAAAAA
AACCAAGGTGTATAAAGAAAAACCTTGGGGGAAACCCCCCCCCCCCGGGG
GGAAATATAAACCCCCCCGAGAGAAAAAAAAAAAAAAAAGAAAAGGGGCC
TCTTTTGTGGACAAA

Query= MSMg01no548_g21.b1 MSMg01no548_g21.b1 CHROMAT_FILE:
MSMg01no548_g21.b1 PHD_FILE: MSMg01no548_g21.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:30:21 2005
         (615 letters)



>mm_chr16_82942905_82943921
          Length = 1017

 Score = 1137 bits (588), Expect = 0.0
 Identities = 607/614 (98%), Gaps = 4/614 (0%)
 Strand = Plus / Minus

                                                                       
Query: 5   gaattctcatgggcataaaatcaatgaattatcttttccatttgtgatgttggaagtttc 64
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 817 gaattctcatgggcataaaatcaatgaattatcttttccatttgtgatgttggaagtttc 758

                                                                       
Query: 65  tcataatcacattcactaacgttgttatagttgatatatgttggagggacattggagcat 124
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 757 tcataatcacattcactaacgttgttatagttgatatatgttggagggacattggagcat 698

                                                                       
Query: 125 tttaaatatctcacacatagagctttaaatatgtacaaaccagacaaatgtgaaagacaa 184
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 697 tttaaatatctcacacatagagctttaaatatgtacaaaccagacaaatgtgaaagacaa 638

                                                                       
Query: 185 aagtgctggagaaaacacgtgagtgtgggaaacccttgcctgaaggatcctgtttgcaac 244
           ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 637 aagtgctggag-aaacacgtgagtgtgggaaacccttgcctgaaggatcctgtttgcaac 579

                                                                       
Query: 245 tgctttagaatgcaactgatacatgtcatgatatttgaggtaagtgttttaatataggaa 304
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 578 tgctttagaatgcaactgatacatgtcatgatatttgaggtaagtgttttaatataggaa 519

                                                                       
Query: 305 aaagaagagtgcctaattaagtttatgtatatcttatatgaagttcaggatacagtgac- 363
           |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| 
Sbjct: 518 aaagaagagtgcctgattaagtttatgtatatcttatatgaagttcaggatacagtgact 459

                                                                       
Query: 364 tttaggaaaagccataagtaagtgatgagtacattaaagagtagttttagag--aaaaaa 421
           ||||||||||||||||||||||||||||||||||||||||||||||||||||  ||||||
Sbjct: 458 tttaggaaaagccataagtaagtgatgagtacattaaagagtagttttagagaaaaaaaa 399

                                                                       
Query: 422 atatttaaggtagagtgggcatcagtgcacagatctaaatttgaaaaatctgttatggtg 481
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 398 atatttaaggtagagtgggcatcagtgcacagatctaaatttgaaaaatctgttatggtg 339

                                                                       
Query: 482 gtgagaacctactatgatgaatacagtgtgagatacatgaatataggaggaggtagcagt 541
           ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 338 gtgagaacctactatgatgaatacagtgtgagacacatgaatataggaggaggtagcagt 279

                                                                       
Query: 542 ggtaggtaaagaagcaagaaaaagagataggataatgaaattgcttagaaacttttgttt 601
           ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 278 ggtaggtaaagaagcaagaaaaagagaaaggataatgaaattgcttagaaacttttgttt 219

                         
Query: 602 tggtatatcttaag 615
           ||||||||||||||
Sbjct: 218 tggtatatcttaag 205


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 31
Number of extensions: 4
Number of successful extensions: 4
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 615
Length of database: 1017
Length adjustment: 10
Effective length of query: 605
Effective length of database: 1007
Effective search space:   609235
Effective search space used:   609235
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)