BAC Information

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BAC

Clone NameB6Ng01-002F22
Chromosome17 (Build37)
Map Location 37,190,479 - 37,304,795
singlet/doubletdoublet
Overlap geneGabbr1, Olfr90, Olfr91, Olfr92, EG224763, LOC667973, Olfr93
Upstream geneEG547347, LOC667782, H2-Bl, EG667792, C920025E04Rik, H2-T10, LOC630294, LOC672718, ENSMUSG00000073403, LOC675325, LOC626268, EG667977, LOC625785, H2-T3, LOC100043127, EG667827, LOC435525, LOC677333, LOC100043134, LOC625881, Rpp21, Trim39, H2-M10.2, H2-M10.1, H2-M10.3, Gm318, LOC100043140, LOC674152, LOC383240, LOC224752, H2-M10.4, H2-M11, LOC667896, H2-M9, LOC620340, H2-M1, LOC667912, LOC100043158, LOC667915, H2-M10.5, H2-M10.6, Trim26, Trim15, Trim10, LOC100043164, Trim40, Trim31, Ppp1r11, Znrd1, 1700022C21Rik, H2-M6-ps, 2410137M14Rik, H2-M4-ps, D130003B22Rik, Zfp57, Mog
Downstream geneOlfr753-ps1, LOC630355, Ubd, Olfr94, Olfr95, Olfr96, Olfr97, Olfr754-ps1, Olfr98, H2-M3, Olfr755-ps1, Olfr99, Olfr756-ps1, Olfr101, Olfr102, Olfr103, Olfr104, GA_x5J8B7W5KGR-1115818-1115257, Olfr105, Olfr758-ps1, Olfr106, Olfr107, Olfr759-ps1, Olfr108, Olfr760-ps1, Olfr109, H2-M2, Olfr110, Olfr111, Olfr112, Olfr113, Olfr114, Olfr115, Olfr116, Olfr117, Olfr118, Olfr119, Scocp, Olfr120, Olfr1558-ps1, Olfr121, Olfr122, Olfr123, Olfr124, Olfr125, LOC672822, Olfr126, Olfr127, Olfr128, Ppia-ps17_697.1, Olfr761, Olfr1552-ps1, LOC100043265, Olfr129, Olfr130, Olfr131, Olfr132, Olfr133
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-002F22.bB6Ng01-002F22.g
ACCDH840415DH840416
length983635
definitionDH840415|Mus musculus domesticus DNA, BAC clone: B6Ng01-002F22, 5' end.DH840416|Mus musculus domesticus DNA, BAC clone: B6Ng01-002F22, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(37,304,221 - 37,304,795)(37,190,479 - 37,191,111)
sequence
gaattcagagaattgattctcattttggaaatgcaagatatacacctaga
atcagaactctgtccctcccttgtcctttcctgtgcctccaactctctgc
ccctgctgcctggcgggcaatgaccgacctatttttatctcatggaggct
ctgactcagatctctacaatctctccacccatcttgctaagtttccactt
gtgggtcgctaccatgctagccccttgcttcaaatcctccacggccttgt
gttgcatgtcaggaaaactcatgcattgctctcttacctttctctcttga
acccagacaagccacagcgtgaaggaaaatgcaacacaaacttagttcag
aaacaatggtaactcagtctctgggtgcaacaactaaaacctaatcttgt
aagccttactaaaatctaattcctttggtggtgaatccttgcatatccac
catgataccgggaaactctagcagctacatcttactcttatgctgtcccc
gttccaaaaagacctaactctcccctgcttcctctcttcctccatccaac
ccagaagttccacctacttgcccaccaccagagattgagttaccaaaaga
ccttggatcccgaagcaagaattacaggccattgtgaactaccatgtaca
agggtccaaactcctgtccttggcaagagtagcaagtgctcttatgcact
gagccatttctccaggcctctgaattcttatttgctgatggtgcagttaa
cattccgtgaaagggaaagaggtgactgcaatatatctcagtggaagaac
atttgcctagcatgtgagtctctaagttgaattttcagcactagaagaaa
acatgtgtgttaaacagatgattcagccattaatagcatgtactactctt
atagagcttccagtacccatatcagacgctcataactcaagaccagggaa
tctgacaccctagtgctatatacactgcatata
gaattccactctatgtctatttatctggatctcttttattttagattctt
ctgcactcccccctcccccctttttttttctaatggactcgtcaaatgtc
agggcccagcaggaaaggacagggtgcagagcagacaccctactgatctt
gttcttgttctctgaaattgaaggtggaaatttcattgagggagctgcct
agggatctgcagagaacgtatttgtatttcctgagcagatgttcagaccc
tataaacatgggatgaggtggggtacagagatgaccaaagagagtgggct
tagggttgtttgagaataagcagaagtgggagacagcagagtatgtgtta
atatggaaggaagggcatgcagttttgagtagggccaacgtgccagatgc
aagacaagagaaggacgcttaaggcaaaagcaaagtctagaaatttgaca
ggaagaagaatgcggtgctggcagtgaatagttaaggaaaggcactaggt
tgcccaagacactaggcaatgtgagatgtgtatgtgtgtgtgtgtgtgtg
ggtaaggggcttgggagccaaccttcatttcctcctttcctccctcagtg
cgacctaaggtaagccaccaagttctttgtatgaa
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr17_37304221_37304795
seq2: B6Ng01-002F22.b_49_623 (reverse)

seq1  GTGGGCAAGTAGGTGGAACTTCTGGGTTGGATGGAGGAAGAGAGGAAGCA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGGGCAAGTAGGTGGAACTTCTGGGTTGGATGGAGGAAGAGAGGAAGCA  50

seq1  GGGGAGAGTTAGGTCTTTTTGGAACGGGGACAGCATAAGAGTAAGATGTA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGGAGAGTTAGGTCTTTTTGGAACGGGGACAGCATAAGAGTAAGATGTA  100

seq1  GCTGCTAGAGTTTCCCGGTATCATGGTGGATATGCAAGGATTCACCACCA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTGCTAGAGTTTCCCGGTATCATGGTGGATATGCAAGGATTCACCACCA  150

seq1  AAGGAATTAGATTTTAGTAAGGCTTACAAGATTAGGTTTTAGTTGTTGCA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGAATTAGATTTTAGTAAGGCTTACAAGATTAGGTTTTAGTTGTTGCA  200

seq1  CCCAGAGACTGAGTTACCATTGTTTCTGAACTAAGTTTGTGTTGCATTTT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCAGAGACTGAGTTACCATTGTTTCTGAACTAAGTTTGTGTTGCATTTT  250

seq1  CCTTCACGCTGTGGCTTGTCTGGGTTCAAGAGAGAAAGGTAAGAGAGCAA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTCACGCTGTGGCTTGTCTGGGTTCAAGAGAGAAAGGTAAGAGAGCAA  300

seq1  TGCATGAGTTTTCCTGACATGCAACACAAGGCCGTGGAGGATTTGAAGCA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCATGAGTTTTCCTGACATGCAACACAAGGCCGTGGAGGATTTGAAGCA  350

seq1  AGGGGCTAGCATGGTAGCGACCCACAAGTGGAAACTTAGCAAGATGGGTG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGGGCTAGCATGGTAGCGACCCACAAGTGGAAACTTAGCAAGATGGGTG  400

seq1  GAGAGATTGTAGAGATCTGAGTCAGAGCCTCCATGAGATAAAAATAGGTC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGAGATTGTAGAGATCTGAGTCAGAGCCTCCATGAGATAAAAATAGGTC  450

seq1  GGTCATTGCCCGCCAGGCAGCAGGGGCAGAGAGTTGGAGGCACAGGAAAG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTCATTGCCCGCCAGGCAGCAGGGGCAGAGAGTTGGAGGCACAGGAAAG  500

seq1  GACAAGGGAGGGACAGAGTTCTGATTCTAGGTGTATATCTTGCATTTCCA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACAAGGGAGGGACAGAGTTCTGATTCTAGGTGTATATCTTGCATTTCCA  550

seq1  AAATGAGAATCAATTCTCTGAATTC  575
      |||||||||||||||||||||||||
seq2  AAATGAGAATCAATTCTCTGAATTC  575

seq1: chr17_37190479_37191111
seq2: B6Ng01-002F22.g_66_700

seq1  GAATTCCACTCTATGTCTATTTATCTGGATCTCTTTTATTTTAGATTCTT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCACTCTATGTCTATTTATCTGGATCTCTTTTATTTTAGATTCTT  50

seq1  CTGCACTCCCCCCTCCCCCCTTTTTTTTTCTAATGGACTCGTCAAATGTC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGCACTCCCCCCTCCCCCCTTTTTTTTTCTAATGGACTCGTCAAATGTC  100

seq1  AGGGCCCAGCAGGAAAGGACAGGGTGCAGAGCAGACACCCTACTGATCTT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGGCCCAGCAGGAAAGGACAGGGTGCAGAGCAGACACCCTACTGATCTT  150

seq1  GTTCTTGTTCTCTGAAATTGAAGGTGGAAATTTCATTGAGGGAGCTGCCT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTCTTGTTCTCTGAAATTGAAGGTGGAAATTTCATTGAGGGAGCTGCCT  200

seq1  AGGGATCTGCAGAGAACGTATTTGTATTTCCTGAGCAGATGTTCAGACCC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGGATCTGCAGAGAACGTATTTGTATTTCCTGAGCAGATGTTCAGACCC  250

seq1  TATAAACATGGGATGAGGTGGGGTACAGAGATGACCAAAGAGAGTGGGCT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATAAACATGGGATGAGGTGGGGTACAGAGATGACCAAAGAGAGTGGGCT  300

seq1  TAGGGTTGTTTGAGAATAAGCAGAAGTGGGAGACAGCAGAGTATGTGTTA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGGGTTGTTTGAGAATAAGCAGAAGTGGGAGACAGCAGAGTATGTGTTA  350

seq1  ATATGGAAGGAAGGGCATGCAGTTTTGAGTAGGGCCAACGTGCCAGATGC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATGGAAGGAAGGGCATGCAGTTTTGAGTAGGGCCAACGTGCCAGATGC  400

seq1  AAGACAAGAGAAGGACGCTTAAGGCAAAAGCAAAGTCTAGAAATTTGACA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGACAAGAGAAGGACGCTTAAGGCAAAAGCAAAGTCTAGAAATTTGACA  450

seq1  GGAAGAAGAATGCGGTGCTGGCAGTGAATAGTTAAGGAAAGGCACTAGGT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAAGAAGAATGCGGTGCTGGCAGTGAATAGTTAAGGAAAGGCACTAGGT  500

seq1  TGCCCAAGACACTAGGCAATGTGAGATGTGTATGTGTGTGTGTGTGTGTG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCCCAAGACACTAGGCAATGTGAGATGTGTATGTGTGTGTGTGTGTGTG  550

seq1  GGTAAGGGGCTTGGGAGCCAACCTTCATTTCCTCC-TTCCTCCCTCAGTG  599
      ||||||||||||||||||||||||||||||||||| ||||||||||||||
seq2  GGTAAGGGGCTTGGGAGCCAACCTTCATTTCCTCCTTTCCTCCCTCAGTG  600

seq1  CGACCCAGGGCAAGCCACCAAGTAC-TTGTATGAA  633
      ||||| | || |||||||||||| | |||||||||
seq2  CGACCTAAGGTAAGCCACCAAGTTCTTTGTATGAA  635