BAC Information

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BAC

Clone NameB6Ng01-003F16
Chromosome17 (Build37)
Map Location 71,367,894 - 71,514,069
singlet/doubletdoublet
Overlap geneMyom1
Upstream geneLOC623112, LOC623143, Dlgap1, Tgif1, LOC668724, LOC546695, LOC240156, Mylc2b, 2900073G15Rik
Downstream geneLpin2, Emilin2, LOC100043644, Smchd1, LOC100043879, Ndc80, LOC668740, Spdya, LOC623451, Wdr43, 4632412N22Rik, BC027072, Clip4, Alk
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-003F16.bB6Ng01-003F16.g
ACCDH841094DH841095
length1061,092
definitionDH841094|Mus musculus domesticus DNA, BAC clone: B6Ng01-003F16, 5' end.DH841095|Mus musculus domesticus DNA, BAC clone: B6Ng01-003F16, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(71,367,894 - 71,367,998)(71,512,975 - 71,514,069)
sequence
ttgaagcaaatagtttctgaagccctatagattataatggattactttct
gtttattgttagtgtgtttactgtgtgtgtttataaaagagggagggagg
gaggga
gaattcaccccttcaactagtctggctagccaggatcctggtctctgtgg
ttacaggtaggccaccacatctgcctggcactatgtgggctctggggatc
caaactctgcacttaccatctcacaatgtacttctgtaagaagcaaacta
gctgggcatggcggctcatacctgcaacagaagcacctgggaagccgaag
caagaggcagtacaagttctaggccaacccagaccttgtctaaaaatcaa
ataaatcaataaacaagaaagagcaattgacacatcaaaaaaaaaaacca
aaaaaaaaaaaaacaaaaaaaaaaacaaaaacaaaaaaaccctctttctt
ccaaacctaaatcaaaataagaccaaaaaaaaaaaaaaaaaaaaaaaaaa
aaaaggagagaaagagaaaagaaagcatagatttttttttttttctccca
aaggttaaaccctagttagattacacttgaatatctgtttctgccatggt
taaatcaaaaaagctctgatcaggtcaacttatactgatcacctcatagg
gaaagcattctaaataatcaatttattttcttcttgctcctgacctttac
catctgacacctgccactaagtatattctatatgttatacataccatata
tgtgtgttatataaaatacatgttattatacatactatataatacaaaat
ttataacacatgttttcttgtttatatattttttctcatttatatgaaat
atataacatatactttatctatagttatataaaatatataacatacttta
tatatagttatataaaatatatttgcatatagccccctcttgctacttgc
tcttgaatttcatgtcttccctatcaacctttccactgattttgtgctcg
cctggctgaattccatccatttgtcctgtgtgttcccattgaaccaagga
ggtatagcccaagatctaaaattatgatcttttgagaagccgcactgggg
tgatgtgtgtggccttattattgcagtggctcagcctgatccagggtgac
tgcattctgaatatctgttctctaggatgtgatcctactggg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr17_71367894_71367998
seq2: B6Ng01-003F16.b_55_160

seq1  TTGAAGCAAATAGTTTCTGAAG-TTTATAGATTATAATGGATTACTTTCT  49
      ||||||||||||||||||||||   |||||||||||||||||||||||||
seq2  TTGAAGCAAATAGTTTCTGAAGCCCTATAGATTATAATGGATTACTTTCT  50

seq1  GTTTATTGTTAGTGTGTTTACTGTGTGTGTTTATAAAAGAGGGAGGGAGG  99
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTATTGTTAGTGTGTTTACTGTGTGTGTTTATAAAAGAGGGAGGGAGG  100

seq1  GAGGGA  105
      ||||||
seq2  GAGGGA  106

seq1: chr17_71512975_71514069
seq2: B6Ng01-003F16.g_68_1159 (reverse)

seq1  CCCAGTAGGGATCACATCCTAGAGAAACAGGATATTTCAGAATGCCAGTC  50
      ||||||| |||||||||||||||| |||| |||| ||||||||| |||||
seq2  CCCAGTA-GGATCACATCCTAGAG-AACA-GATA-TTCAGAATG-CAGTC  45

seq1  ACGCT-GATCAGGCTGAGCCAACTGCAAATAAT-AGGCCACACACATCAC  98
      || || |||||||||||||| ||||| |||||| ||||||||||||||||
seq2  ACCCTGGATCAGGCTGAGCC-ACTGC-AATAATAAGGCCACACACATCAC  93

seq1  CCCAGTGCCGGCTCTCAAAAAGATCATAATTTTAGATCTTGGGCTATAAC  148
      |||||||| |  |||| |||||||||||||||||||||||||||||| ||
seq2  CCCAGTGCGGCTTCTC-AAAAGATCATAATTTTAGATCTTGGGCTAT-AC  141

seq1  CTCC-TGGTTCAATGGGAACACACAGGACAAATGGATGGAATTCAGCCAG  197
      |||| |||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCCTTGGTTCAATGGGAACACACAGGACAAATGGATGGAATTCAGCCAG  191

seq1  GCGAGCACAAAATCAGT-GAAAGGTTGATA-GGAAGACATGAAATTCAAG  245
      ||||||||||||||||| |||||||||||| |||||||||||||||||||
seq2  GCGAGCACAAAATCAGTGGAAAGGTTGATAGGGAAGACATGAAATTCAAG  241

seq1  AGCAAGTAGCAAGA-GAGGCTATATGCAAATATATTTTATATAACTATAT  294
      |||||||||||||| | |||||||||||||||||||||||||||||||||
seq2  AGCAAGTAGCAAGAGGGGGCTATATGCAAATATATTTTATATAACTATAT  291

seq1  ATAAAGTATGTTATATATTTTATATAACTATAGATAAAGTATATGTTATA  344
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAAAGTATGTTATATATTTTATATAACTATAGATAAAGTATATGTTATA  341

seq1  TATTTCATATAAATGAGAAAAAATATATAAACAAGAAAACATGTGTTATA  394
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTTCATATAAATGAGAAAAAATATATAAACAAGAAAACATGTGTTATA  391

seq1  AATTTTGTATTATATAGTATGTATAATAACATGTATTTTATATAACACAC  444
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTTTGTATTATATAGTATGTATAATAACATGTATTTTATATAACACAC  441

seq1  ATATATGGTATGTATAACATATAGAATATACTTAGTGGCAGGTGTCAGAT  494
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATATGGTATGTATAACATATAGAATATACTTAGTGGCAGGTGTCAGAT  491

seq1  GGTAAAGGTCAGGAGCAAGAAGAAAATAAATTGATTATTTAGAATGCTTT  544
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTAAAGGTCAGGAGCAAGAAGAAAATAAATTGATTATTTAGAATGCTTT  541

seq1  CCCTATGAGGTGATCAGTATAAGTTGACCTGATCAGAGCTTTTCTGATTT  594
      ||||||||||||||||||||||||||||||||||||||||||| ||||||
seq2  CCCTATGAGGTGATCAGTATAAGTTGACCTGATCAGAGCTTTTTTGATTT  591

seq1  AACCATGGCAGAAACAGATATTCAAGTGTAATCTAACTAGGGTCTAACCT  644
      ||||||||||||||||||||||||||||||||||||||||||| ||||||
seq2  AACCATGGCAGAAACAGATATTCAAGTGTAATCTAACTAGGGTTTAACCT  641

seq1  TTGGGAGAAAAAAAAAAAAATCTATGCTTTCTTTTCTCTTTCTCTCCTTT  694
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGGGAGAAAAAAAAAAAAATCTATGCTTTCTTTTCTCTTTCTCTCCTTT  691

seq1  TTTTTTTTTTTTTTTTTTTTTTTTTTTGGTCTTATTTTGATTTAGGTTTG  744
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTTTTTTTTTTTTTTTTTTTTTTTGGTCTTATTTTGATTTAGGTTTG  741

seq1  GAAGAAAGAGGGTTTTTTTGTTTTTGTTTTTTTTTTTGTTTTTTTTTTTT  794
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGAAAGAGGGTTTTTTTGTTTTTGTTTTTTTTTTTGTTTTTTTTTTTT  791

seq1  TTGGTTTTTTTTTTTGATGTGTCAATTGCTCTTTCTTGTTTATTGATTTA  844
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGGTTTTTTTTTTTGATGTGTCAATTGCTCTTTCTTGTTTATTGATTTA  841

seq1  TTTGATTTTTAGACAAGGTCTGGGTTGGCCTAGAACTTGTACTGCCTCTT  894
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGATTTTTAGACAAGGTCTGGGTTGGCCTAGAACTTGTACTGCCTCTT  891

seq1  GCTTCGGCTTCCCAGGTGCTTCTGTTGCAGGTATGAGCCGCCATGCCCAG  944
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTTCGGCTTCCCAGGTGCTTCTGTTGCAGGTATGAGCCGCCATGCCCAG  941

seq1  CTAGTTTGCTTCTTACAGAAGTACATTGTGAGATGGTAAGTGCAGAGTTT  994
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAGTTTGCTTCTTACAGAAGTACATTGTGAGATGGTAAGTGCAGAGTTT  991

seq1  GGATCCCCAGAGCCCACATAGTGCCAGGCAGATGTGGTGGCCTACCTGTA  1044
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGATCCCCAGAGCCCACATAGTGCCAGGCAGATGTGGTGGCCTACCTGTA  1041

seq1  ACCACAGAGACCAGGATCCTGGCTAGCCAGACTAGTTGAAGGGGTGAATT  1094
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCACAGAGACCAGGATCCTGGCTAGCCAGACTAGTTGAAGGGGTGAATT  1091

seq1  C  1095
      |
seq2  C  1092