BAC Information

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BAC

Clone NameB6Ng01-008E21
Chromosome17 (Build37)
Map Location 61,566,716 - 61,567,359
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC100043549, LOC433129, EG620725
Downstream geneLOC100043560
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-008E21.bB6Ng01-008E21.g
ACCDH844605DH844606
length9581,109
definitionDH844605|Mus musculus domesticus DNA, BAC clone: B6Ng01-008E21, 5' end.DH844606|Mus musculus domesticus DNA, BAC clone: B6Ng01-008E21, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcaatatcaacacatcacaatcatttttattcacaaatttaaatta
cattattctggtgtttgtgagataactagtgttacaagcactctctatgc
ttctagatgattcaggtttggttactagtgcccacaactcagctcactac
tgtctgggaccagtatttgtttccctgagtgtggcttatatgattggcat
aataatttaaatcccttcaattccattcacaggccatgattttattttat
ttttttagttttagttatgaccaaataaaatgacactgcatatgcactca
ctttcttcctttatgtactaatcttgtgtgattccatttttgcagctgta
aatggtactgtagtaaacatggatgtggcaatatctcagtagcattactt
agagcttttgctagagctcagaaatggtataactggatcacatgccaagt
ttgttttagtgtgtgtgttttggtttttttagtttgtaagtttccagatt
gaatttcatagtgactgaaccagtttatattttctgtaaggctcactctt
ttactagtcctaaccagcattcgaatttttgatttcattttttgattttt
cacatttaatttactattttagatcattcactttacatcctgctcactgc
cttcctcccagtcaccccctcccacaatccgtgccccatccagtctttct
attcttctctgaaggggtggattccccccaccctgtttttccccttttcc
ttcagcccctctcccccacatataaaatctctgcaaggttaggcacttcc
tctcccactgaaaccagacactgcaacccaactagtagaacatatttcaa
gtacaagcaacagcgtttgagacagcccctgttcgggacccacatgtaga
tcgcgttgcacatttactgcgcatgtgctgggtggccaagttcagcccat
gttgtaag
gaattctcacctgaggaataccgaatggcagagaaacacctgaaaaaatg
ttcaacatccttaatcatcagggaaatgcaaatcaaaacaaccctgagat
tccacttcactccagtcagaatggctaagatcaaaaactcaggtgacagc
agatgctggcgaggatgtggagaaagaggaacactccttcattgttggtg
ggattgcaagcttgtacaaccactctggaaatcagtctggcggttcctca
gaaaattgggcatagtactaccggaggatcccacaataccactcctgggc
atatatccagaagatgtcccaaccggtaagaaggacacatgcttcactat
gttcatagcagccttgtttataatagccagaagctggaaagaacccagat
gcccctcaacagaggaatggatacagaaaatgtggtatatttacacaatg
gaatactactcagctattaaaaaatgaatttatgaaattcctaggcaaat
ggatggacctggagggcatcatcttgagtgaggtaacccaatcacaaagg
aactcgcacaatatgtactcactgataagtggatattagcccagaaactt
aggatacccaagatataagatacaacttgccaaacacatgaaattcaaga
agaacgaagaccaaagtgtggacactttaccctttcttagaaatgggaac
aaaacacccatagaaggagttacagagacaaaatttggagctgtgacgaa
aggatggaccatctagtgatttgccatatgcagggatccatcccataatc
agcttccaaatgctgaacaccattgcatacactagcaagattttgctgaa
aggacccagatattactctctcttgtgaaactatgccagggtctagcaaa
cacagaagtggatgatcacagtcagctaatggatgggtcactagggaccc
cattggaggagctagaagtaattactctattgagcttagtggtatctgca
ccctaataggtgggaccaccaatctgaactaaccagtaccctagagctct
gtcctagctgtctattgtttgaaagaatggtctatacggcactactctgg
caaaagaag
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr17_61566716_61567359
seq2: B6Ng01-008E21.b_48_691 (reverse)

seq1  AGCAGGATGTAAAGTGAATGATCTAAAATAGTAAATTAAATGTGAAAAAT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCAGGATGTAAAGTGAATGATCTAAAATAGTAAATTAAATGTGAAAAAT  50

seq1  CAAAAAATGAAATCAAAAATTCGAATGCTGGTTAGGACTAGTAAAAGAGT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAAAAATGAAATCAAAAATTCGAATGCTGGTTAGGACTAGTAAAAGAGT  100

seq1  GAGCCTTACAGAAAATATAAACTGGTTCAGTCACTATGAAATTCAATCTG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGCCTTACAGAAAATATAAACTGGTTCAGTCACTATGAAATTCAATCTG  150

seq1  GAAACTTACAAACTAAAAAAACCAAAACACACACACTAAAACAAACTTGG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAACTTACAAACTAAAAAAACCAAAACACACACACTAAAACAAACTTGG  200

seq1  CATGTGATCCAGTTATACCATTTCTGAGCTCTAGCAAAAGCTCTAAGTAA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGTGATCCAGTTATACCATTTCTGAGCTCTAGCAAAAGCTCTAAGTAA  250

seq1  TGCTACTGAGATATTGCCACATCCATGTTTACTACAGTACCATTTACAGC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTACTGAGATATTGCCACATCCATGTTTACTACAGTACCATTTACAGC  300

seq1  TGCAAAAATGGAATCACACAAGATTAGTACATAAAGGAAGAAAGTGAGTG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCAAAAATGGAATCACACAAGATTAGTACATAAAGGAAGAAAGTGAGTG  350

seq1  CATATGCAGTGTCATTTTATTTGGTCATAACTAAAACTAAAAAAATAAAA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATATGCAGTGTCATTTTATTTGGTCATAACTAAAACTAAAAAAATAAAA  400

seq1  TAAAATCATGGCCTGTGAATGGAATTGAAGGGATTTAAATTATTATGCCA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAATCATGGCCTGTGAATGGAATTGAAGGGATTTAAATTATTATGCCA  450

seq1  ATCATATAAGCCACACTCAGGGAAACAAATACTGGTCCCAGACAGTAGTG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCATATAAGCCACACTCAGGGAAACAAATACTGGTCCCAGACAGTAGTG  500

seq1  AGCTGAGTTGTGGGCACTAGTAACCAAACCTGAATCATCTAGAAGCATAG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTGAGTTGTGGGCACTAGTAACCAAACCTGAATCATCTAGAAGCATAG  550

seq1  AGAGTGCTTGTAACACTAGTTATCTCACAAACACCAGAATAATGTAATTT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGTGCTTGTAACACTAGTTATCTCACAAACACCAGAATAATGTAATTT  600

seq1  AAATTTGTGAATAAAAATGATTGTGATGTGTTGATATTGAATTC  644
      ||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATTTGTGAATAAAAATGATTGTGATGTGTTGATATTGAATTC  644