BAC Information

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BAC

Clone NameB6Ng01-008G19
Chromosome17 (Build37)
Map Location 75,219,730 - 75,470,954
singlet/doubletdoublet
Overlap geneTtc27, LOC100043672, Ltbp1
Upstream geneLOC240160, Xdh, Srd5a2, Memo1, EG668716, 2810410M20Rik, LOC668773, LOC668775, Spast, Slc30a6, Nlrc4, LOC100043883, LOC624159, Yipf4, Birc6
Downstream geneEG621988, Rasgrp3, 2810405J04Rik, LOC668787, LOC100043885
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-008G19.bB6Ng01-008G19.g
ACCDH844686DH844687
length914904
definitionDH844686|Mus musculus domesticus DNA, BAC clone: B6Ng01-008G19, 5' end.DH844687|Mus musculus domesticus DNA, BAC clone: B6Ng01-008G19, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(75,470,043 - 75,470,954)(75,219,730 - 75,220,632)
sequence
gaattcaatgtcaaattccctaaaaccaactcagtcaaaggtaaaaacaa
actgtgcaacaaccctctgcctaatctaatctaataacacacctgctccc
acagggccccctgcccatgtcatctaaacaaagcagttttatcaaactaa
gctgttcttcaacctctccaggcacactctagcctcaaagcctcccccca
gccccttgtattaatatttacaaggctcctgccctctcctcccacaggcc
tttgtttaaccatcacccctagggctttgtctaataaccaaccacccaca
cgcacctcaaaccctcccagctttccccggacactatctgcagttctatt
ttctctttagcactaaccacagccaacagatattgagcagcactgtgcat
ttgtcctctgccctctgcagactgtgagctcccaaaaaagagtacatttg
ttcaggtgccacccttgctgtaaggataaagtctccctatacagctgaac
taaatgaaaactgtctgaacccatgatcaagacttaataaatacttcaga
tagtggctacaaaggatttctttatggcattttatacaattttattctgc
agtagagcattttaagggttcttaaaaaaaaagattcttaatctcctact
tctcctgttaaaagcaagaccttaggggctagagagatggctcagtggtt
aagagcattggctgtcttccagaggacctgagttctgttcccagagcccc
acacagcagctgtctgtaactctaggggatccaatgtcctattcagtcct
ctgcatatactgcacgtttgtggtatacaagcctatacaggcaaaactca
aaacacatttatatatatatgggttttcctggggtttttgggtttggttt
ggtttggatttttg
gaattcagttgtattttgaggacttgtgtgaaagttttgaggcatcttga
ctcatttatttaatatatattgtattggtgcgtgtgtgccgcgtgtgtgc
tcgcgcagtgtgtgtgtgtgtacgtgtacacctgtactcgagcacacatg
catgtgtgactgacttagcatgcatgtggagatcagcagacaacttgcag
aaattggttttttctttcatctttaggtacatcccttgtcatgagtatca
agatggctagcttacaaagctgcccggctatgcgggctgtgcgtctaata
ggcttgtagaccttagatgtgtttccccacagctggattttttttttttt
ttttgacatgggttctggccatcaaactcaggttaggttgtctggtttgt
gggataaatgctattacttgctgagccatctcactggccccatcagtcat
cattgataatgggcatttaagtaataatttaaaaacaaagtaaaagacat
gctaagcattgtccacagttcttcagattctaaagacctccattgagaaa
gaaaaaataaagacattgtagtgagtcagctgatagcaactgggagaccc
tgaagttttaaagctgagagctttgtatgagtccagggccaagatggtta
cctgtactgagagaggcaagccaacagttaactgatctggagattttcat
tgcatgcaaattattaaaacaactgcaaaaaataaccaaaaggtaaatga
tacaggagccatattatacttcatatatctaaatgtttattaaaaattta
atatactgaatataaaacttggatattttttaaacttaaaagtaaataag
acactttcatgtgaccagagtggcctcgagctatatcttgggtactgtat
ttgc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr17_75470043_75470954
seq2: B6Ng01-008G19.b_44_957 (reverse)

seq1  CAAAAAACCAAACCAAACCAAACCAAAAAACCCCAGGAAAACCCATATAT  50
      |||||| ||||||||||||||||| |||||||||||||||||||||||||
seq2  CAAAAATCCAAACCAAACCAAACCCAAAAACCCCAGGAAAACCCATATAT  50

seq1  ATAT-AATGTG-TTTGAGTTTTGCCTGTATAGGCTTGTATACCACAAACG  98
      |||| |||||| ||||||||||||||||||||||||||||||||||||||
seq2  ATATAAATGTGTTTTGAGTTTTGCCTGTATAGGCTTGTATACCACAAACG  100

seq1  TGCAGTATATGCAGAGGACTGAATAGGACATTGGATCCCCTAGAGTTACA  148
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCAGTATATGCAGAGGACTGAATAGGACATTGGATCCCCTAGAGTTACA  150

seq1  GACAGCTGCTGTGTGGGGCTCTGGGAACAGAACTCAGGTCCTCTGGAAGA  198
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACAGCTGCTGTGTGGGGCTCTGGGAACAGAACTCAGGTCCTCTGGAAGA  200

seq1  CAGCCAATGCTCTTAACCACTGAGCCATCTCTCTAGCCCCTAAGGTCTTG  248
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGCCAATGCTCTTAACCACTGAGCCATCTCTCTAGCCCCTAAGGTCTTG  250

seq1  CTTTTAACAGGAGAAGTAGGAGATTAAGAATCTTTTTTTTTAAGAACCCT  298
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTTAACAGGAGAAGTAGGAGATTAAGAATCTTTTTTTTTAAGAACCCT  300

seq1  TAAAATGCTCTACTGCAGAATAAAATTGTATAAAATGCCATAAAGAAATC  348
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAATGCTCTACTGCAGAATAAAATTGTATAAAATGCCATAAAGAAATC  350

seq1  CTTTGTAGCCACTATCTGAAGTATTTATTAAGTCTTGATCATGGGTTCAG  398
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTGTAGCCACTATCTGAAGTATTTATTAAGTCTTGATCATGGGTTCAG  400

seq1  ACAGTTTTCATTTAGTTCAGCTGTATAGGGAGACTTTATCCTTACAGCAA  448
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGTTTTCATTTAGTTCAGCTGTATAGGGAGACTTTATCCTTACAGCAA  450

seq1  GGGTGGCACCTGAACAAATGTACTCTTTTTTGGGAGCTCACAGTCTGCAG  498
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGTGGCACCTGAACAAATGTACTCTTTTTTGGGAGCTCACAGTCTGCAG  500

seq1  AGGGCAGAGGACAAATGCACAGTGCTGCTCAATATCTGTTGGCTGTGGTT  548
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGGCAGAGGACAAATGCACAGTGCTGCTCAATATCTGTTGGCTGTGGTT  550

seq1  AGTGCTAAAGAGAAAATAGAACTGCAGATAGTGTCCGGGGAAAGCTGGGA  598
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTGCTAAAGAGAAAATAGAACTGCAGATAGTGTCCGGGGAAAGCTGGGA  600

seq1  GGGTTTGAGGTGCGTGTGGGTGGTTGGTTATTAGACAAAGCCCTAGGGGT  648
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGTTTGAGGTGCGTGTGGGTGGTTGGTTATTAGACAAAGCCCTAGGGGT  650

seq1  GATGGTTAAACAAAGGCCTGTGGGAGGAGAGGGCAGGAGCCTTGTAAATA  698
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATGGTTAAACAAAGGCCTGTGGGAGGAGAGGGCAGGAGCCTTGTAAATA  700

seq1  TTAATACAAGGGGCTGGGGGGAGGCTTTGAGGCTAGAGTGTGCCTGGAGA  748
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAATACAAGGGGCTGGGGGGAGGCTTTGAGGCTAGAGTGTGCCTGGAGA  750

seq1  GGTTGAAGAACAGCTTAGTTTGATAAAACTGCTTTGTTTAGATGACATGG  798
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTTGAAGAACAGCTTAGTTTGATAAAACTGCTTTGTTTAGATGACATGG  800

seq1  GCAGGGGGCCCTGTGGGAGCAGGTGTGTTATTAGATTAGATTAGGCAGAG  848
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAGGGGGCCCTGTGGGAGCAGGTGTGTTATTAGATTAGATTAGGCAGAG  850

seq1  GGTTGTTGCACAGTTTGTTTTTACCTTTGACTGAGTTGGTTTTAGGGAAT  898
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTTGTTGCACAGTTTGTTTTTACCTTTGACTGAGTTGGTTTTAGGGAAT  900

seq1  TTGACATTGAATTC  912
      ||||||||||||||
seq2  TTGACATTGAATTC  914

seq1: chr17_75219730_75220632
seq2: B6Ng01-008G19.g_68_971

seq1  GAATTCAGCTGTATTTTGAGGACTTGTGTGAAAGTTTTGAGGCATCTTGA  50
      |||||||| |||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAGTTGTATTTTGAGGACTTGTGTGAAAGTTTTGAGGCATCTTGA  50

seq1  CTCATTTATTTAATATATATTGTATTGGTGCGTGTGTGCCGCGTGTGTGC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCATTTATTTAATATATATTGTATTGGTGCGTGTGTGCCGCGTGTGTGC  100

seq1  TCGCGCAGTGTGTGTGTGTGTACGTGTACACCTGTACTCGAGCACACATG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCGCGCAGTGTGTGTGTGTGTACGTGTACACCTGTACTCGAGCACACATG  150

seq1  CATGTGTGACTGACTTAGCATGCATGTGGAGATCAGCAGACAACTTGCAG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGTGTGACTGACTTAGCATGCATGTGGAGATCAGCAGACAACTTGCAG  200

seq1  AAATTGGTTTTTTCTTTCATCTTTAGGTACATCCCTTGTCATGAGTATCA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATTGGTTTTTTCTTTCATCTTTAGGTACATCCCTTGTCATGAGTATCA  250

seq1  AGATGGCTAGCTTACAAAGCTGCCCGGCTATGCGGGCTGTGCGTCTAATA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATGGCTAGCTTACAAAGCTGCCCGGCTATGCGGGCTGTGCGTCTAATA  300

seq1  GGCTTGTAGACCTTAGATGTGTTTCCCCACAGCTGGATTTTTTTTTTTTT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCTTGTAGACCTTAGATGTGTTTCCCCACAGCTGGATTTTTTTTTTTTT  350

seq1  TTTTGACATGGGTTCTGGCCATCAAACTCAGGTTAGGTTGTCTGGTTTGT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTGACATGGGTTCTGGCCATCAAACTCAGGTTAGGTTGTCTGGTTTGT  400

seq1  GGGATAAATGCTATTACTTGCTGAGCCATCTCACTGGCCCCATCAGTCAT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGATAAATGCTATTACTTGCTGAGCCATCTCACTGGCCCCATCAGTCAT  450

seq1  CATTGATAATGGGCATTTAAGTAATAATTTAAAAACAAAGTAAAAGACAT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTGATAATGGGCATTTAAGTAATAATTTAAAAACAAAGTAAAAGACAT  500

seq1  GCTAAGCATTGTCCACAGTTCTTCAGATTCTAAAGACCTCCATTGAGAAA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTAAGCATTGTCCACAGTTCTTCAGATTCTAAAGACCTCCATTGAGAAA  550

seq1  GAAAAAATAAAGACATTGTAGTGAGTCAGCTGATAGCAACTGGGAGACCC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAAAATAAAGACATTGTAGTGAGTCAGCTGATAGCAACTGGGAGACCC  600

seq1  TGAAG-TTTAAAGCTGAGAGCTTTGTATGAGTCCAGGGCCAAGATGGTTA  649
      ||||| ||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAAGTTTTAAAGCTGAGAGCTTTGTATGAGTCCAGGGCCAAGATGGTTA  650

seq1  CCTGTACTGAGAGAGGCAAGCCAACAGTTAACTGATCTGGAGATTTTCAT  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGTACTGAGAGAGGCAAGCCAACAGTTAACTGATCTGGAGATTTTCAT  700

seq1  TGCATGCAAATTATTAAAACAACTGCAAAAAATAACC-AAAGGTAAATGA  748
      ||||||||||||||||||||||||||||||||||||| ||||||||||||
seq2  TGCATGCAAATTATTAAAACAACTGCAAAAAATAACCAAAAGGTAAATGA  750

seq1  TACAGGAGCCATATTAATACTTCATATATCTAAATGTTTATTAAAAATTT  798
      ||||||||||||||| ||||||||||||||||||||||||||||||||||
seq2  TACAGGAGCCATATT-ATACTTCATATATCTAAATGTTTATTAAAAATTT  799

seq1  AATATACTGAATATAAAACTTGGATATTTTTTAAACTTAAAAGTAAATAA  848
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATATACTGAATATAAAACTTGGATATTTTTTAAACTTAAAAGTAAATAA  849

seq1  GACAC-TTCATGTGACCAGAGTGGCCTCGAGCTATATCTTGGGTACTGTT  897
      ||||| |||||||||||||||||||||||||||||||||||||||||| |
seq2  GACACTTTCATGTGACCAGAGTGGCCTCGAGCTATATCTTGGGTACTG-T  898

seq1  ATTTGC  903
      ||||||
seq2  ATTTGC  904