BAC Information

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BAC

Clone NameB6Ng01-008P19
Chromosome17 (Build37)
Map Location 22,827,171 - 22,889,921
singlet/doubletdoublet
Overlap geneENSMUSG00000046088, EG383218, EG433078
Upstream geneZfp760, BC043476, 4930515G13Rik, 2610036F08Rik, LOC624960, 3110048L19Rik, 4930432O21Rik, LOC665820, LOC665825, LOC674332, LOC631010, EG665844, EG210853, LOC671007, EG240038, EG631624, 6330416L07Rik, Zfp758, 1300003B13Rik, EG210876, LOC100042656, EG628185
Downstream geneLOC100042679, A630033E08Rik, LOC671128, LOC665961, EG434701, LOC665976, LOC100042225, LOC100042234, EG665988, LOC100042248, Zfp40, LOC100042257, LOC100042261, Vmn2r-ps133, EG666002, EG638102, EG619697, EG619775, EG619788, Olfr752-ps1, EG666030, EG381070, Zfp213, Zfp13, Zscan10, LOC666062, Mmp25, LOC665757, BC038613, Thoc6, Hcfc1r1, Tnfrsf12a, Cldn6, Cldn9, EG666080, 1520401A03Rik, Pkmyt1, Paqr4, Kremen2, 9530082P21Rik
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-008P19.bB6Ng01-008P19.g
ACCDH845056DH845057
length1,1791,109
definitionDH845056|Mus musculus domesticus DNA, BAC clone: B6Ng01-008P19, 5' end.DH845057|Mus musculus domesticus DNA, BAC clone: B6Ng01-008P19, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(22,827,171 - 22,827,924)(22,888,817 - 22,889,921)
sequence
gaattcatacaggagaaaaaccttacaaatgtagtgaatgtgagaaattc
tttacccggaaataccatcttacagttcatcaaagaatacatactgttaa
gaaacctttcaaatgtagtgaatgtggcatgtcttttaccaagaaataca
atcttagaagccattcaagatttcatacaggagaaaaaccttacaaatgt
agtgaatgtgacaaagactttacctacaaaggtgctcttagaagacatca
gagaattcatacaggtgagaaaccttacaaatgtaatgaatgtgccaaat
gctttactgagaaaggaaaacttataagtcatcaaataatccatatagaa
gagaaatcttacaaatgtagtgaatgtgagaaaagtttcacccggaaata
ccatcttacagttcatcagagaattcatacaggagagaaaccatacaaat
gtagtgaatgtgagaaattctttacccggaaataccatcttactgttcat
cagagaagtcatacaggagagaaaccttacaaatgtagtgaatgtgacaa
attctttacccggaaataccatcttacagttcatcagagaattcatacag
cagagaaaccttataaatgtagtgaatgtgacaaaggctttacctacaaa
ggtgctcttagaagacatcagagaattcatacaggtgagaaaccttacaa
atgaatgtgccaaatgctttactgagaaaggcaaacttagaagtcatcaa
agaatccatacaggagagaaaccttacaaatgtagtgaatgtgacaaatg
cttttccagtaaatactttcttagaaatcatcagaaaaatcatacaggag
agaaacattacagatgaggtgaatggaacaaatgttttactcagaaatcc
tgtcttagatgtcatcaaagaattcatataggagagaaacatttatcaga
gatacaagcagttgtagaacagttatgcaaaggaattgcaataaagggac
agaaatgctatatctgatcctatttatattttatttggggcctgctccaa
agcaaactgtctgcttttaacaagaaggactagtggtttactataatacc
aataacttacaccaggtactgactacttgaattaagagtgctgccatttg
cattccttagcttcaagaagctttcagtg
gaattctttgttttctccttatctactgagcacagcactgtgttagaata
catgtgtttgctgtagcatgtcctccctatcagccattctcattctgttc
ttccagatctgctcaccatggagcattaaaacaaaccctggaagatgaag
agagaagagccagtagccaagtcattgaggcatgagtggtatggggttca
agtgacagtggaaactggacatcaaattatttttgctacattctctggtg
taacataagaactcagcaggtgaagacacatttatgaatatagttttaga
gcacatacatctcagattaaatgttgataaggaaataaaatttgcatagt
aattgttaatgttttgaaccatgcctaaattcctgagattcacaatttgt
attgtcaattttctaaaatagtggtttggagttgaaataaatacccaatt
tttctcagtatttcaaaatgatcatcaagcacactcttggggatttctaa
actgtacatgaacatgttcacattgtttgttcatatgttatatcttttaa
atttcatggtttcttgatttgtatggactcatgcttgaaattacggtgaa
aatgttttttttttaatttagatttcttcatttatttactgaccaaccac
tgtccccctccttatccccactcacagagaccttccctgcttctctactg
agaatgtgggtcctcctgagtatcccccaaatcttttgcattaagtctct
gccgtattaggcatatactctcccacagaggccagactaggcaactttgt
tggggaatggataccacagtcaggctacagctttagggacagcctctgtt
ccagttgtttgggggcccacatagaacttgagctgcatgtctgctatgta
tgtgttgtgtgtctcattctagcctgagtatattctttgggttgggggct
cagtctttgagagctccaaagtccagattagttgactgtgtaagtcatcc
tctggggtcccatccctcagtactcaatcttccctcacactcccatagag
tcttctgagctctgtccaatgtttggctatgggtaactgcatctgttctg
tcagctgct
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr17_22827171_22827924
seq2: B6Ng01-008P19.b_495_1226

seq1  AATGTAGTGAATGTGAGAAATTCTTTACCCGGAAATACCATCTTACTGTT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGTAGTGAATGTGAGAAATTCTTTACCCGGAAATACCATCTTACTGTT  50

seq1  CATCAGAGAAGTCATACAGGAGAGAAACCTTACAAATGTAGTGAATGTGA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATCAGAGAAGTCATACAGGAGAGAAACCTTACAAATGTAGTGAATGTGA  100

seq1  CAAATTCTTTACCCGGAAATACCATCTTACAGTTCATCAGAGAATTCATA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAATTCTTTACCCGGAAATACCATCTTACAGTTCATCAGAGAATTCATA  150

seq1  CAGCAGAGAAACCTTATAAATGTAGTGAATGTGACAAAGGCTTTACCTAC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGCAGAGAAACCTTATAAATGTAGTGAATGTGACAAAGGCTTTACCTAC  200

seq1  AAAGGTGCTCTTAGAAGACATCAGAGAATTCATACAGGTGAGAAACCTTA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGGTGCTCTTAGAAGACATCAGAGAATTCATACAGGTGAGAAACCTTA  250

seq1  CAAATGAATGTGCCAAATGCTTTACTGAGAAAGGCAAACTTAGAAGTCAT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAATGAATGTGCCAAATGCTTTACTGAGAAAGGCAAACTTAGAAGTCAT  300

seq1  CAAAGAATCCATACAGGAGAGAAACCTTACAAATGTAGTGAATGTGACAA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAAGAATCCATACAGGAGAGAAACCTTACAAATGTAGTGAATGTGACAA  350

seq1  ATGCTTTTCCAGTAAATACTTTCTTAGAAATCATCAGAAAAATCATACAG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGCTTTTCCAGTAAATACTTTCTTAGAAATCATCAGAAAAATCATACAG  400

seq1  GAGAGAAACATTACAGATGAGGTGAATGGAACAAATGTTTTACCCAGAAA  450
      ||||||||||||||||||||||||||||||||||||||||||| ||||||
seq2  GAGAGAAACATTACAGATGAGGTGAATGGAACAAATGTTTTACTCAGAAA  450

seq1  TCCTGTCTTAGATGTCATCAAAGAATTCATATAGGAGAGAAACATTTATC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTGTCTTAGATGTCATCAAAGAATTCATATAGGAGAGAAACATTTATC  500

seq1  AGAGATACAAGCAGTTGTTAGAACAGTTATTGCAAAGGAATTGCAAATAA  550
      ||||||||||||||||| ||||||||||| |||||||||||||| |||||
seq2  AGAGATACAAGCAGTTG-TAGAACAGTTA-TGCAAAGGAATTGC-AATAA  547

seq1  AGGGACAGAAAATGCTATATCTGAATCCTATTTATATTTTAATTTGGGGC  600
      |||||||| |||||||||||||| |||||||||||||||| |||||||||
seq2  AGGGACAG-AAATGCTATATCTG-ATCCTATTTATATTTT-ATTTGGGGC  594

seq1  CTGCTCCCAAAGCAAACCTGTCTGCTTTTTAAACAAG-AGAACTAGTGGT  649
      ||||| |||||||||| ||||||||||||  |||||| || |||||||||
seq2  CTGCT-CCAAAGCAAA-CTGTCTGCTTTT--AACAAGAAGGACTAGTGGT  640

seq1  TTTAACTAATAAATTAACCATTAAACTAACAC--AGTACTGGACTACCTT  697
      ||  ||| ||||    |||| | |||| ||||   ||||| ||||| |||
seq2  TT--ACT-ATAA---TACCAAT-AACTTACACCAGGTACT-GACTA-CTT  681

seq1  GATTTAAGGAGGTAGTTGCCTATTGTCCATCTCTTAAGCTACAAGAAGCT  747
      || |||| |||   | ||||  |||  ||| || | |||| |||||||||
seq2  GAATTAA-GAG--TGCTGCCATTTG--CAT-TCCTTAGCTTCAAGAAGCT  725

seq1  TTCAGTG  754
      |||||||
seq2  TTCAGTG  732

seq1: chr17_22888817_22889921
seq2: B6Ng01-008P19.g_83_1177 (reverse)

seq1  AGCAGCTGACAGAAACAGATGCAGTTACCCATAGCCAAACATTGGACAGA  50
      |||||||||||| |||||||||||||||||||||||||||||||||||||
seq2  AGCAGCTGACAG-AACAGATGCAGTTACCCATAGCCAAACATTGGACAGA  49

seq1  GCTCAG-AGACTCTTATGGGAGTGTTGGGGGAAGGATTGAAGGTACTGAA  99
      |||||| |||||| |||||||||| || ||||| ||||||  ||||||| 
seq2  GCTCAGAAGACTC-TATGGGAGTG-TGAGGGAA-GATTGA--GTACTGA-  93

seq1  GGGGATGGGAACCCCAGAGGATGACCTTACACAGTCAACTAATCTGGACC  149
       |||||||| |||||||||||||| |||||||||||||||||||||||| 
seq2  -GGGATGGG-ACCCCAGAGGATGA-CTTACACAGTCAACTAATCTGGAC-  139

seq1  TTTGGGAGCTCTCAAAGACTGAGCCCCCAA-CCAAAGAATATACTCAGGC  198
       || |||||||||||||||||||||||||| |||||||||||||||||||
seq2  -TTTGGAGCTCTCAAAGACTGAGCCCCCAACCCAAAGAATATACTCAGGC  188

seq1  TAGAATGAGACACACAACACATACATAGCAGACATGCAGCTCAAGTTCTA  248
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGAATGAGACACACAACACATACATAGCAGACATGCAGCTCAAGTTCTA  238

seq1  TGTGGGCCCCCAAACAACTGGAACAGAGGCTGTCCCTAAAGCTGTAGCCT  298
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGGGCCCCCAAACAACTGGAACAGAGGCTGTCCCTAAAGCTGTAGCCT  288

seq1  GACTGTGGTATCCATTCCCCAACAAAGTTGCCTAGTCTGGCCTCTGTGGG  348
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACTGTGGTATCCATTCCCCAACAAAGTTGCCTAGTCTGGCCTCTGTGGG  338

seq1  AGAGTATATGCCTAATACGGCAGAGACTTAATGCAAAAGATTTGGGGGAT  398
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGTATATGCCTAATACGGCAGAGACTTAATGCAAAAGATTTGGGGGAT  388

seq1  ACTCAGGAGGACCCACATTCTCAGTAGAGAAGCAGGGAAGGTCTCTGTGA  448
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTCAGGAGGACCCACATTCTCAGTAGAGAAGCAGGGAAGGTCTCTGTGA  438

seq1  GTGGGGATAAGGAGGGGGACAGTGGTTGGTCAGTAAATAAATGAAGAAAT  498
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGGGGATAAGGAGGGGGACAGTGGTTGGTCAGTAAATAAATGAAGAAAT  488

seq1  CTAAATTAAAAAAAAAACATTTTCACCGTAATTTCAAGCATGAGTCCATA  548
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAAATTAAAAAAAAAACATTTTCACCGTAATTTCAAGCATGAGTCCATA  538

seq1  CAAATCAAGAAACCATGAAATTTAAAAGATATAACATATGAACAAACAAT  598
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAATCAAGAAACCATGAAATTTAAAAGATATAACATATGAACAAACAAT  588

seq1  GTGAACATGTTCATGTACAGTTTAGAAATCCCCAAGAGTGTGCTTGATGA  648
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGAACATGTTCATGTACAGTTTAGAAATCCCCAAGAGTGTGCTTGATGA  638

seq1  TCATTTTGAAATACTGAGAAAAATTGGGTATTTATTTCAACTCCAAACCA  698
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATTTTGAAATACTGAGAAAAATTGGGTATTTATTTCAACTCCAAACCA  688

seq1  CTATTTTAGAAAATTGACAATACAAATTGTGAATCTCAGGAATTTAGGCA  748
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTATTTTAGAAAATTGACAATACAAATTGTGAATCTCAGGAATTTAGGCA  738

seq1  TGGTTCAAAACATTAACAATTACTATGCAAATTTTATTTCCTTATCAACA  798
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGTTCAAAACATTAACAATTACTATGCAAATTTTATTTCCTTATCAACA  788

seq1  TTTAATCTGAGATGTATGTGCTCTAAAACTATATTCATAAATGTGTCTTC  848
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTAATCTGAGATGTATGTGCTCTAAAACTATATTCATAAATGTGTCTTC  838

seq1  ACCTGCTGAGTTCTTATGTTACACCAGAGAATGTAGCAAAAATAATTTGA  898
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCTGCTGAGTTCTTATGTTACACCAGAGAATGTAGCAAAAATAATTTGA  888

seq1  TGTCCAGTTTCCACTGTCACTTGAACCCCATACCACTCATGCCTCAATGA  948
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTCCAGTTTCCACTGTCACTTGAACCCCATACCACTCATGCCTCAATGA  938

seq1  CTTGGCTACTGGCTCTTCTCTCTTCATCTTCCAGGGTTTGTTTTAATGCT  998
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTGGCTACTGGCTCTTCTCTCTTCATCTTCCAGGGTTTGTTTTAATGCT  988

seq1  CCATGGTGAGCAGATCTGGAAGAACAGAATGAGAATGGCTGATAGGGAGG  1048
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCATGGTGAGCAGATCTGGAAGAACAGAATGAGAATGGCTGATAGGGAGG  1038

seq1  ACATGCTACAGCAAACACATGTATTCTAACACAGTGCTGTGCTCAGTAGA  1098
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATGCTACAGCAAACACATGTATTCTAACACAGTGCTGTGCTCAGTAGA  1088

seq1  TAAGGAG  1105
      |||||||
seq2  TAAGGAG  1095