BAC Information

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BAC

Clone NameB6Ng01-009N15
Chromosome17 (Build37)
Map Location 60,112,567 - 60,271,954
singlet/doubletdoublet
Overlap genenone
Upstream gene2610034M16Rik, Nudt12, 4930505H01Rik, LOC100043537, LOC100043542
Downstream geneLOC100043549
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-009N15.bB6Ng01-009N15.g
ACCDH845683DH845684
length7801,138
definitionDH845683|Mus musculus domesticus DNA, BAC clone: B6Ng01-009N15, 5' end.DH845684|Mus musculus domesticus DNA, BAC clone: B6Ng01-009N15, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(60,112,567 - 60,113,355)(60,270,813 - 60,271,954)
sequence
gaattctctgtttagttctatatcccattttttgatttggttatgtttgg
gtgtttggtggttagcttcttcagttctttatatattttgaatattagtc
ctttataggatgtggggttagtgaagttccgccccctcaatctgtaggtt
gctgatttgtcctattgactaagtcctttgttcttcattttcatgaggtt
ccatttatcaattcttgatctttgatcctgagccattggagttctgttta
ggaaatccccctcacctctgtgacaatgaattgcaggctctgtcccactc
tcttctataagattcagtgtatctggttttatgttaaggtccttgatcca
cttggacttcagctttgtaaaggtgacaaatatgaatctattttcattgt
ttctacatatagactaacagatattgatgtttatactaattaattttgaa
gtagactctaaaggatatgagtatatatatatatatatatatatatatat
atatatatatattcattattctacttatttaaagaatattgaaaaggatg
aacaagtttggtttaaatatctctgttccataactagtgttaagtggagg
gaatggcctgtgatatccttttgtctctgtccttcttgttattattcagt
ctgaacttcacaggacaaaaaaaactggtgtatagagatttatgacattt
tcttatattaaaatactaacgacaattgtgttagcctgaaatttagtgag
ttcaaaaaatcaaaaacttaaatggaaggt
gaattcctgattattttccattctttaacttccatgtgctggagtaagta
tacctaccatcaaattggcatttgttaaaagggcctgataacatgcattt
tgcagatatggatttcagagaaaaaaatgcaaagactgtattggaaatca
aagcagtataagttatgatttctttagctcctgacaaataatcctgagat
ttcttttcttagtgatcaccagttacgaggaagtgctttgactgaattga
tttcagggccataaatgattgcttcaatatgaggaaaatcttgcatttag
gataacaatcttattttgtcaccaatgtgatgcacagtataatttcaggg
agcaggacaataactactgggagataagtgttgctatgtagtgcaaatac
ttaatggtctccaagcctctgtcttgatgagtgtccctaaataccatgct
atcttttgttgtttttcttctattgaaaaggcaaccatggaatacaaatt
gtatactaaagtgctaatgttatgttcagtagtaattcaaacttttacat
aaaatgcattaaataaagtactttatttcaacatcttttcaattatataa
taatatatttatatacatatatattatttatttcaattaatatataatgt
tatatattgaacatatgcctttttgaaatcaaaattaacaagatttaaat
tcacttatagatttttgtaaattgtttatgaacctgaattatattttcat
agacttgtataagacaaaattaaagatgcagtactattcaacatgtttaa
taaaatgttcattaaggttacattgtgataactttaatttgatgtttttg
atctctgtatgtatgaaatatatgttgtcattggcttaatagatttttaa
gaacattgttgcataaatgttcattttctgataaattatatattcaatcc
tatcattttatataatgtagcatattaagatttctgatatatgtatttac
aatttcctcagtgaatatgaataatttgttttaggatttgaatatgtaaa
ttacatatgacgattatcccagctacaccttgattatatattcatttatt
ctcccagctgaccattggcactccataatgttcctctt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr17_60112567_60113355
seq2: B6Ng01-009N15.b_51_830

seq1  GAATTCTCTGTTTAGTTCTATATCCCATTTTTTGATTTGGTTATGTTTGG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTCTGTTTAGTTCTATATCCCATTTTTTGATTTGGTTATGTTTGG  50

seq1  GTGTTTGGTGGTTAGCTTCTTCAGTTCTTTATATATTTTGAATATTAGTC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTTTGGTGGTTAGCTTCTTCAGTTCTTTATATATTTTGAATATTAGTC  100

seq1  CTTTATAGGATGTGGGGTTAGTGAAGTTCCGCCCCCTCAATCTGTAGGTT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTATAGGATGTGGGGTTAGTGAAGTTCCGCCCCCTCAATCTGTAGGTT  150

seq1  GCTGATTTGTCCTATTGACTAAGTCCTTTGTTCTTCATTTTCATGAGGTT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTGATTTGTCCTATTGACTAAGTCCTTTGTTCTTCATTTTCATGAGGTT  200

seq1  CCATTTATCAATTCTTGATCTTTGATCCTGAGCCATTGGAGTTCTGTTTA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCATTTATCAATTCTTGATCTTTGATCCTGAGCCATTGGAGTTCTGTTTA  250

seq1  GGAAATCCCCCTCACCTCTGTGACAATGAATTGCAGGCTCTGTCCCACTC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAAATCCCCCTCACCTCTGTGACAATGAATTGCAGGCTCTGTCCCACTC  300

seq1  TCTTCTATAAGATTCAGTGTATCTGGTTTTATGTTAAGGTCCTTGATCCA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTCTATAAGATTCAGTGTATCTGGTTTTATGTTAAGGTCCTTGATCCA  350

seq1  CTTGGACTTCAGCTTTGTAAAGGTGACAAATATGAATCTATTTTCATTGT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTGGACTTCAGCTTTGTAAAGGTGACAAATATGAATCTATTTTCATTGT  400

seq1  TTCTACATATAGACTAACAGATATTGATGTTTATACTAATTAATTTTGAA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTACATATAGACTAACAGATATTGATGTTTATACTAATTAATTTTGAA  450

seq1  GTAGACTCTAAAGGATATGAGTATATATATATATATATATATATATATAT  500
      |||||||||||||||||||||    |||||||||||||||||||||||||
seq2  GTAGACTCTAAAGGATATGAG----TATATATATATATATATATATATAT  496

seq1  ATATATATATATATATTCATTATTCTACTTATTTAGAGAATATTGAAAAG  550
      ||||||||||||||||||||||||||||||||||| ||||||||||||||
seq2  ATATATATATATATATTCATTATTCTACTTATTTAAAGAATATTGAAAAG  546

seq1  GATGAACAAGTTTGGTTTTAATATCTCTGTTCCATAACTAGTGTTAAGTG  600
      |||||||||||||||||| |||||||||||||||||||||||||||||||
seq2  GATGAACAAGTTTGGTTTAAATATCTCTGTTCCATAACTAGTGTTAAGTG  596

seq1  GAGGGAATGGCCTGTGATATCCTTTTGTCTCTGTCCTTCTTGTTATTATT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGGGAATGGCCTGTGATATCCTTTTGTCTCTGTCCTTCTTGTTATTATT  646

seq1  CAAGTCTGAACTTCACAGGAC-AGAAAAACTGGGGTAGAGAGATTCATGA  699
      | ||||||||||||||||||| | ||||||||| ||| ||||||| ||||
seq2  C-AGTCTGAACTTCACAGGACAAAAAAAACTGGTGTATAGAGATTTATGA  695

seq1  CATTTTCTTATATTAAAATACTAACGACAATTGTGTTAGGCCTGAGATTT  749
      |||||||||||||||||||||||||||||||||||||| |||||| ||||
seq2  CATTTTCTTATATTAAAATACTAACGACAATTGTGTTA-GCCTGAAATTT  744

seq1  AGTGAGCTACAAAAAATCAGAAGACATGAAAGTGGAAGGT  789
      |||||| | |||||||||| || || |  || ||||||||
seq2  AGTGAG-TTCAAAAAATCA-AAAACTT--AAATGGAAGGT  780

seq1: chr17_60270813_60271954
seq2: B6Ng01-009N15.g_70_1207 (reverse)

seq1  AAGAGGAAACATTATAGATGACAAATGGTCAAGCTTGGTGAATAAATGAA  50
      |||||| |||||||| ||   | ||||||| |||| || |||||||||||
seq2  AAGAGG-AACATTATGGAGTGCCAATGGTC-AGCTGGGAGAATAAATGAA  48

seq1  TATATAAATACAAGGTGTAGCTGGATTAATCGTCATTATGTAATTTACAT  100
      |||||||   ||||||||||||||  ||||||||| ||||||||||||||
seq2  TATATAA--TCAAGGTGTAGCTGGGATAATCGTCA-TATGTAATTTACAT  95

seq1  ATTTCAAATCTTAAAACATA-TATTCATA-TCACTTGAGGATATTGTAAA  148
      | |||||||| ||||||| | |||||||| |||| |||||| ||||||||
seq2  A-TTCAAATCCTAAAACAAATTATTCATATTCAC-TGAGGAAATTGTAAA  143

seq1  TACATATAATCAGAAATCTTAATATGCTACATTATATAAAATGATAGGAT  198
      ||||||| ||||||||||||||||||||||||||||||||||||||||||
seq2  TACATAT-ATCAGAAATCTTAATATGCTACATTATATAAAATGATAGGAT  192

seq1  TGAATATATAATTTATCAGAAAATGAACATTTATGCAACAATGTTCTTAA  248
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAATATATAATTTATCAGAAAATGAACATTTATGCAACAATGTTCTTAA  242

seq1  AAATCTATTAAGCCAATGGCAACATATATTTCATACATACAGAGGTC-AA  297
      |||||||||||||||||| ||||||||||||||||||||||||| || ||
seq2  AAATCTATTAAGCCAATGACAACATATATTTCATACATACAGAGATCAAA  292

seq1  AACATCAAATTAAAGTTATCACAATGTAACCTTAATGAACATTTTATTAA  347
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACATCAAATTAAAGTTATCACAATGTAACCTTAATGAACATTTTATTAA  342

seq1  ACATGTTGAATAGTACTGCATCTTTAATTTTGTCTTCTACAAGTCTATG-  396
      |||||||||||||||||||||||||||||||||||| |||||||||||| 
seq2  ACATGTTGAATAGTACTGCATCTTTAATTTTGTCTTATACAAGTCTATGA  392

seq1  AAATATAATTCAGGTTCATAAACAATTTACAAAAATCTATAAGTGAATTT  446
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATATAATTCAGGTTCATAAACAATTTACAAAAATCTATAAGTGAATTT  442

seq1  AAATCTTGTTAATTTTGATTTCAAAAAGGCATATGTTCAATATATAACAT  496
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATCTTGTTAATTTTGATTTCAAAAAGGCATATGTTCAATATATAACAT  492

seq1  TATATATTAATTGAAATAAATAATATATATGTATATAAATATATTATTAT  546
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATATATTAATTGAAATAAATAATATATATGTATATAAATATATTATTAT  542

seq1  ATAATTGAAAAGATGTTGAAATAAAGTACTTTATTTAATGCATTTTATGT  596
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAATTGAAAAGATGTTGAAATAAAGTACTTTATTTAATGCATTTTATGT  592

seq1  AAAAGTTTGAATTACTACTGAACATAACATTAGCACTTTAGTATACAATT  646
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAGTTTGAATTACTACTGAACATAACATTAGCACTTTAGTATACAATT  642

seq1  TGTATTCCATGGTTGCCTTTTCAATAGAAGAAAAACAACAAAAGATAGCA  696
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTATTCCATGGTTGCCTTTTCAATAGAAGAAAAACAACAAAAGATAGCA  692

seq1  TGGTATTTAGGGACACTCATCAAGACAGAGGCTTGGAGACCATTAAGTAT  746
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGTATTTAGGGACACTCATCAAGACAGAGGCTTGGAGACCATTAAGTAT  742

seq1  TTGCACTACATAGCAACACTTATCTCCCAGTAGTTATTGTCCTGCTCCCT  796
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGCACTACATAGCAACACTTATCTCCCAGTAGTTATTGTCCTGCTCCCT  792

seq1  GAAATTATACTGTGCATCACATTGGTGACAAAATAAGATTGTTATCCTAA  846
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAATTATACTGTGCATCACATTGGTGACAAAATAAGATTGTTATCCTAA  842

seq1  ATGCAAGATTTTCCTCATATTGAAGCAATCATTTATGGCCCTGAAATCAA  896
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGCAAGATTTTCCTCATATTGAAGCAATCATTTATGGCCCTGAAATCAA  892

seq1  TTCAGTCAAAGCACTTCCTCGTAACTGGTGATCACTAAGAAAAGAAATCT  946
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCAGTCAAAGCACTTCCTCGTAACTGGTGATCACTAAGAAAAGAAATCT  942

seq1  CAGGATTATTTGTCAGGAGCTAAAGAAATCATAACTTATACTGCTTTGAT  996
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGATTATTTGTCAGGAGCTAAAGAAATCATAACTTATACTGCTTTGAT  992

seq1  TTCCAATACAGTCTTTGCATTTTTTTCTCTGAAATCCATATCTGCAAAAT  1046
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCAATACAGTCTTTGCATTTTTTTCTCTGAAATCCATATCTGCAAAAT  1042

seq1  GCATGTTATCAGGCCCTTTTAACAAATGCCAATTTGATGGTAGGTATACT  1096
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCATGTTATCAGGCCCTTTTAACAAATGCCAATTTGATGGTAGGTATACT  1092

seq1  TACTCCAGCACATGGAAGTTAAAGAATGGAAAATAATCAGGAATTC  1142
      ||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACTCCAGCACATGGAAGTTAAAGAATGGAAAATAATCAGGAATTC  1138