BAC Information

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BAC

Clone NameB6Ng01-010A24
Chromosome17 (Build37)
Map Location 39,173,163 - 39,174,147
singlet/doubletsinglet
Overlap genenone
Upstream geneOlfr129, Olfr130, Olfr131, Olfr132, Olfr133, Olfr134, Olfr135, Olfr138, Olfr137, Olfr762-ps1, Olfr136, LOC626985, LOC100043297
Downstream geneLOC100043300, EG668200, LOC672857, LOC627695
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-010A24.bB6Ng01-010A24.g
ACCDH845839DH845840
length1,058988
definitionDH845839|Mus musculus domesticus DNA, BAC clone: B6Ng01-010A24, 5' end.DH845840|Mus musculus domesticus DNA, BAC clone: B6Ng01-010A24, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcttttttcagttctgagccccattttttttaatggggttatttga
ttttatggagtccaccttcttgatttctttatatatattggataatagtc
ccccatctgatttaggataggtaaagatcctttcccaatctgtcggtggt
ctttttgtcttattgacggtgtcttttgacttgcagaagctttgtaactt
tatgaggtcacatttatcaattctcgatcttacagcacaagccattgctg
ttctatttaggaatttatttcccctgtacccatatcttcgaggcttttct
cgatcttacagcacaaatcatgctgttctattcaggacgttttcccctga
acccatatctttgaggcttttccctactttctcctctataattttcagtg
tttctggtttttatgtggagttccttaatccaattagatttgaccttagt
aaaaggagataagaatggatgaattcacgttcttctacatgatcattgcc
agttgtgccagcaccatttgttgaaaatgctgtcttttttccactggatg
gttttaccttccttttcaaagatcaagtgaccataggtgggtaggttcat
ctctgggtcttcaattctgttccattggtctacttgtctgttgctctaac
agtaacatgcagtttttgtcataactgctctgtagtacatctttaggtca
ggaatggtgatttcaccagagtttcttttatccttaagaagagtttttgc
tatcctaggttttttgttattccagatgaatctgccaattgccctttcta
attcattggagaattgagttggaattttgatagggatgcattgaatctgt
agattgcttttggcagatagccatttttactatattgatcttgccatcca
tgaccatgggagatcttccatctcctgagattttctttaatttctttctt
caggaggctgaagttctatcctacagactttcacttccttagttaagagt
catgccaaggtattttatctatttgtggactttggagaagaggggttgtt
gcccttac
gaattccataattaccacagaagtaaaggagcctgaaaaaatgaaaggta
tgaaacaagctatttgaggtaagactgtagagcatgaaagtaagtttctt
ggtaagatgattgtctttacaatgctaatattacagtggctagatgtagt
ggctattcctggttgtcaacttgactatatttggaatgaactacaatcca
gaattggaaggctcaccagtgatccttatctgtaggcttggagatagaag
tttctgatctggatattggtatggagatcttgaggcatagtggctatgga
ttccagaagattaaatctctgagttcaaggtcatccgggattaaaggtgt
ggtgtaacacacctttaatctgggctacacttttcatctgggattaaagg
tgtggtggataacacctttaatctgggctacaccttctgctggagacaat
ataaggacattggaagaaggaagacttgctcttgctcctttgcctgtgtg
ctgtgcgagactgagtaactgctagatccttggacttccattcacagcta
ctactgaaccattgatgggaatccggctacagactgtaagtcatcaataa
attcctttattatatagagatgattcataaattctgtgactctagagaac
cctgactaatacactagataaacacatcagggactcagaattggaaatat
acttggaagttatgggtttttcctaacaatattcacatataaacctggtc
aaatgggaagttatacatagcaacacaccatattggtggctataaaagtc
aattttaatgtttttttttcatttgaacatgataaaagaaagaaattatt
tctcaaaatgtcaagaagaagcacaagcattacatgcaacaccctatttg
ttgtacatcaaatagatgaaggaatgtcatcacttctgcaggtataggct
tgtaggttattataattcacgattctgaaaaaaatgtt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr17_39173163_39174147
seq2: B6Ng01-010A24.g_60_1047

seq1  GAATTCCATAATTACCACAGAAGTAAAGGAGCCTGAAAAAATGAAAGGTA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCATAATTACCACAGAAGTAAAGGAGCCTGAAAAAATGAAAGGTA  50

seq1  TGAAACAAGCTATTTGAGGTAAGACTGTAGAGCATGAAAGTAAGTTTCTT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAAACAAGCTATTTGAGGTAAGACTGTAGAGCATGAAAGTAAGTTTCTT  100

seq1  GGTAAGATGATTGTCTTTACAATGCTAATATTACAGTGGCTAGATGTAGT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTAAGATGATTGTCTTTACAATGCTAATATTACAGTGGCTAGATGTAGT  150

seq1  GGCTATTCCTGGTTGTCAACTTGACTATATTTGGAATGAACTACAATCCA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCTATTCCTGGTTGTCAACTTGACTATATTTGGAATGAACTACAATCCA  200

seq1  GAATTGGAAGGCTCACCAGTGATCCTTATCTGTAGGCTTGGAGATAGAAG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTGGAAGGCTCACCAGTGATCCTTATCTGTAGGCTTGGAGATAGAAG  250

seq1  TTTCTGATCTGGATATTGGTATGGAGATCTTGAGGCATAGTGGCTATGGA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCTGATCTGGATATTGGTATGGAGATCTTGAGGCATAGTGGCTATGGA  300

seq1  TTCCAGAAGATTAAATCTCTGAGTTCAAGGTCATCCGGGATTAAAGGTGT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCAGAAGATTAAATCTCTGAGTTCAAGGTCATCCGGGATTAAAGGTGT  350

seq1  GGTGTAACACACCTTTAATCTGGGCTACACTTTTCATCTGGGATTAAAGG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTGTAACACACCTTTAATCTGGGCTACACTTTTCATCTGGGATTAAAGG  400

seq1  TGTGGTGGATAACACCTTTAATCTGGGCTACACCTTCTGCTGGAGACAAT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGGTGGATAACACCTTTAATCTGGGCTACACCTTCTGCTGGAGACAAT  450

seq1  ATAAGGACATTGGAAGAAGGAAGACTTGCTCTTGCTCCTTTGCCTGTGTG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAAGGACATTGGAAGAAGGAAGACTTGCTCTTGCTCCTTTGCCTGTGTG  500

seq1  CTGTGCGAGACTGAGTAACTGCTAGATCCTTGGACTTCCATTCACAGCTA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTGCGAGACTGAGTAACTGCTAGATCCTTGGACTTCCATTCACAGCTA  550

seq1  CTACTGAACCATTGATGGGAATCCGGCTACAGACTGTAAGTCATCAATAA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTACTGAACCATTGATGGGAATCCGGCTACAGACTGTAAGTCATCAATAA  600

seq1  ATTCCTTTATTATATAGAGATGATTCATAAATTCTGTGACTCTAGAGAAC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCCTTTATTATATAGAGATGATTCATAAATTCTGTGACTCTAGAGAAC  650

seq1  CCTGACTAATACACTAGATAAACACATCAGGGACTCAGAATTGGAAATAT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGACTAATACACTAGATAAACACATCAGGGACTCAGAATTGGAAATAT  700

seq1  ACTTGGAAGTTATGGG-TTTTCCTAACAATATTCACATATAAACCTGGTC  749
      |||||||||||||||| |||||||||||||||||||||||||||||||||
seq2  ACTTGGAAGTTATGGGTTTTTCCTAACAATATTCACATATAAACCTGGTC  750

seq1  AAATGGGAAGTTATACATAGCAACACACCATATTGGTGGCTATAAAAGTC  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATGGGAAGTTATACATAGCAACACACCATATTGGTGGCTATAAAAGTC  800

seq1  AATTTTAATG-TTTTTCTTCATTTGAACATGATAAAAGAAAGAAATTATT  848
      |||||||||| ||||| |||||||||||||||||||||||||||||||||
seq2  AATTTTAATGTTTTTTTTTCATTTGAACATGATAAAAGAAAGAAATTATT  850

seq1  TCTCAAAGTGTC-AGAAGAAGCACAAGCATTACATGCAACACCCTATTTG  897
      ||||||| |||| |||||||||||||||||||||||||||||||||||||
seq2  TCTCAAAATGTCAAGAAGAAGCACAAGCATTACATGCAACACCCTATTTG  900

seq1  TTGTTACATCAAATAGATGAAGGAATGTCATCAC-TCTGCAAGGTATAGG  946
      ||| |||||||||||||||||||||||||||||| ||||| |||||||||
seq2  TTG-TACATCAAATAGATGAAGGAATGTCATCACTTCTGC-AGGTATAGG  948

seq1  C-TGTAAGTGTATTATAATTCACTATTCTG-AAAAAATGTT  985
      | |||| || ||||||||||||| |||||| ||||||||||
seq2  CTTGTAGGT-TATTATAATTCACGATTCTGAAAAAAATGTT  988