BAC Information

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BAC

Clone NameB6Ng01-011F10
Chromosome17 (Build37)
Map Location 38,672,141 - 38,673,226
singlet/doubletsinglet
Overlap genenone
Upstream geneOlfr112, Olfr113, Olfr114, Olfr115, Olfr116, Olfr117, Olfr118, Olfr119, Scocp, Olfr120, Olfr1558-ps1, Olfr121, Olfr122, Olfr123, Olfr124, Olfr125, LOC672822, Olfr126, Olfr127, Olfr128, Ppia-ps17_697.1, Olfr761, Olfr1552-ps1, LOC100043265, Olfr129, Olfr130, Olfr131, Olfr132, Olfr133, Olfr134, Olfr135, Olfr138, Olfr137, Olfr762-ps1, Olfr136, LOC626985
Downstream geneLOC100043297, LOC100043300
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-011F10.bB6Ng01-011F10.g
ACCDH846751DH846752
length7201,071
definitionDH846751|Mus musculus domesticus DNA, BAC clone: B6Ng01-011F10, 5' end.DH846752|Mus musculus domesticus DNA, BAC clone: B6Ng01-011F10, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctatagaaaaatctgttccccaagtaaggtaaaataagtcagtaa
gcagcacccctctattgtttctgcatcagctccagcctgcaggttcctac
tatgtattggttctgtcctgaattctttagatgatgatcagcaatataga
agtgtaaaccaaatacattcttttatctaaaacttggtttttttctttgt
ttcctttgttttttttttttttttttttgtcatttttcattgtagaactg
aaacaagttaggatgaagagtttggagtattgttgagacagaacagagtg
tgttttaggtagaattttggattttggggttagaaagattgagggttgag
agttcagtgttgtattctgacagagtttgaaaaataagcatgcttaagag
cagtctcctggttggaggcctggattatgaactttctgacagaaattaaa
aggctctatattatcttttaattcaaggttctgtcattaagtaatgtgtt
gctgacaaaacagctgtgattaacaagacaccagaaatactaagaggaca
cctttgattttctggaacactcaatgttgatcatctagagctaagaaatt
atatgtgattaagaagagaccatcatcactgagatgaaaccttctgaaaa
aagtttcctgacaatcttcacatagaaaccttgttctagagatgacgggt
gttttctacctcatactggt
gaattctagtatggatccaaagcacagcaggagcctcaggtaggagctgc
tgcagaagccagggatggtttgtttcacctgacttgctaagccagtatcc
aagaacatcaacccagggagggaactgctcatattgggcttggtcatttc
ccattaataactaattaggaaagttagttgtagacaggtcattgcagatc
attttctcaacttaggtgtcctactttcatataaacctgggtgtgtatga
agtatcataggagaccactggtaaacacatgtgttttacttgaagtttag
ttactaacctaacttctagataggacattaccaatcactcactaattttt
gtctttcccaaataagtggatcttgttactgtagtttatacaatggtgac
aaaagtgttaaggtggacaagaatctcaaagaaggttatgtccttgattc
tgatatttggattcatgattaaaaagtcattgtaaatatttagattggtt
atttgattcagctgttccattggagagccaagtcaaggacacgatctgaa
tctggcctcaggattgcatcagctttagttgaaggcacaggacctgacac
ccatggtaagaaggtgtttgaggcacgcacatagacaagtgattgggagt
agttagccatgcaatccagccttaagaccattagtgagtgttaacaaact
gagtggcagccttaagataaagttctttgcctagtagtgttctaatgaat
ttacaagtatttaaatgacagattcatggtccaagtcctttatggtgtaa
aatatttcttcccttttatctagtagttttaacattcctaatgctgcaat
cctttattataatacttattttgtggtgacctttctctaaaattttctgt
tgtcattgcttaactataataccgtacttattgtcaataagcatgggatg
gaaatattttgtatttatttaagagacaactttctttttatggactttat
ttagttgtagattttttcgtgactgtatattgttactactctcaaccctt
ccagattcttgatatccatca
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr17_38672141_38673226
seq2: B6Ng01-011F10.g_71_1134

seq1  AGTATGGATCCAAAGCACAGCAGGAGCCTCAGGTAGGAGCTGCTGCAGAA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTATGGATCCAAAGCACAGCAGGAGCCTCAGGTAGGAGCTGCTGCAGAA  50

seq1  GCCAGGGATGGTTTGTTTCACCTGACTTGCTAAGCCAGTATCCAAGAACA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCAGGGATGGTTTGTTTCACCTGACTTGCTAAGCCAGTATCCAAGAACA  100

seq1  TCAACCCAGGGAGGGAACTGCTCATATTGGGCTTGGTCATTTCCCATTAA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAACCCAGGGAGGGAACTGCTCATATTGGGCTTGGTCATTTCCCATTAA  150

seq1  TAACTAATTAGGAAAGTTAGTTGTAGACAGGTCATTGCAGATCATTTTCT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAACTAATTAGGAAAGTTAGTTGTAGACAGGTCATTGCAGATCATTTTCT  200

seq1  CAACTTAGGTGTCCTACTTTCATATAAACCTGGGTGTGTATGAAGTATCA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAACTTAGGTGTCCTACTTTCATATAAACCTGGGTGTGTATGAAGTATCA  250

seq1  TAGGAGACCACTGGTAAACACATGTGTTTTACTTGAAGTTTAGTTACTAA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGGAGACCACTGGTAAACACATGTGTTTTACTTGAAGTTTAGTTACTAA  300

seq1  CCTAACTTCTAGATAGGACATTACCAATCACTCACTAATTTTTGTCTTTC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTAACTTCTAGATAGGACATTACCAATCACTCACTAATTTTTGTCTTTC  350

seq1  CCAAATAAGTGGATCTTGTTACTGTAGTTTATACAATGGTGACAAAAGTG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAAATAAGTGGATCTTGTTACTGTAGTTTATACAATGGTGACAAAAGTG  400

seq1  TTAAGGTGGACAAGAATCTCAAAGAAGGTTATGTCCTTGATTCTGATATT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAAGGTGGACAAGAATCTCAAAGAAGGTTATGTCCTTGATTCTGATATT  450

seq1  TGGATTCATGATTAAAAAGTCATTGTAAATATTTAGATTGGTTATTTGAT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGATTCATGATTAAAAAGTCATTGTAAATATTTAGATTGGTTATTTGAT  500

seq1  TCAGCTGTTCCATTGGAGAGCCAAGTCAAGGACACGATCTGAATCTGGCC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGCTGTTCCATTGGAGAGCCAAGTCAAGGACACGATCTGAATCTGGCC  550

seq1  TCAGGATTGCATCAGCTTTAGTTGAAGGCACAGGACCTGACACCCATGGT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGGATTGCATCAGCTTTAGTTGAAGGCACAGGACCTGACACCCATGGT  600

seq1  AAGAAGGTGTTTGAGGCACGCACATAGACAAGTGATTGGGAGTAGTTAGC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGAAGGTGTTTGAGGCACGCACATAGACAAGTGATTGGGAGTAGTTAGC  650

seq1  CATGCAATCCAGCCTTAAGACCATTAGTGAGTGTTAACAAACTGAGTGGC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGCAATCCAGCCTTAAGACCATTAGTGAGTGTTAACAAACTGAGTGGC  700

seq1  AGCCTTAAGATAAAGTTCTTTGCCTAGTAGTGTTCTAATGAATTTACAAG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCCTTAAGATAAAGTTCTTTGCCTAGTAGTGTTCTAATGAATTTACAAG  750

seq1  TATTTAAATGACAGATTCATGGTCCAAGTCCTTTATGGTGTAAAATA-TT  799
      ||||||||||||||||||||||||||||||||||||||||||||||| ||
seq2  TATTTAAATGACAGATTCATGGTCCAAGTCCTTTATGGTGTAAAATATTT  800

seq1  CTTCCCTTTAATCTAGTAGTTTTCAACATTCCTAATGCTGCAACCCTTTA  849
      ||||||||| ||||||||||||| ||||||||||||||||||| ||||||
seq2  CTTCCCTTTTATCTAGTAGTTTT-AACATTCCTAATGCTGCAATCCTTTA  849

seq1  ATATAAATACTTATTTTGTGGTGACCCTTTCTCTTAAAATTTTCTGTTGT  899
       ||| ||||||||||||||||||| |||||||| ||||||||||||||||
seq2  TTAT-AATACTTATTTTGTGGTGA-CCTTTCTC-TAAAATTTTCTGTTGT  896

seq1  CATTGCTTAACTATAATAACCGTACTTATTGTCAAATAAGCATGGGGAAT  949
      ||||||||||||||||| ||||||||||||||| ||||||||||||  ||
seq2  CATTGCTTAACTATAAT-ACCGTACTTATTGTC-AATAAGCATGGG--AT  942

seq1  GGAAATATTTTGTAATTTAATTAAAGATATATACTTTTCTTTTTTATGGA  999
      ||||||||||||||  || ||| |||| | | |||||   ||||||||| 
seq2  GGAAATATTTTGTA--TTTATTTAAGAGACA-ACTTT--CTTTTTATGG-  986

seq1  ACTTTAATTTAG-TGTAGATTTTTTCGTAGACTGTATATTGTTTACTACT  1048
      ||||| |||||| ||||||||||||||| |||||||||||| ||||||||
seq2  ACTTT-ATTTAGTTGTAGATTTTTTCGT-GACTGTATATTG-TTACTACT  1033

seq1  CCTCCAAACCTCTTCCCAGATTCTCTCCATATCCATCA  1086
       |||  |||| ||| ||||||  |||  ||||||||||
seq2  -CTC--AACC-CTT-CCAGAT--TCTTGATATCCATCA  1064