BAC Information

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BAC

Clone NameB6Ng01-015B03
Chromosome17 (Build37)
Map Location 36,936,852 - 36,937,900
singlet/doubletsinglet
Overlap genenone
Upstream geneIer3, Flot1, Tubb5, Mdc1, Nrm, 2310014H01Rik, Dhx16, 2310061I04Rik, 2610110G12Rik, Mrps18b, LOC100043673, Ppp1r10, LOC100043674, LOC667766, Abcf1, Prr3, Gna-rs1, H2-T24, H2-T23, H2-T22, EG547347, LOC667782, H2-Bl, EG667792, C920025E04Rik, H2-T10, LOC630294, LOC672718, ENSMUSG00000073403, LOC675325, LOC626268, EG667977, LOC625785, H2-T3, LOC100043127, EG667827, LOC435525, LOC677333, LOC100043134, LOC625881, Rpp21, Trim39, H2-M10.2, H2-M10.1, H2-M10.3, Gm318, LOC100043140, LOC674152, LOC383240, LOC224752, H2-M10.4, H2-M11, LOC667896, H2-M9, LOC620340, H2-M1, LOC667912, LOC100043158, LOC667915, H2-M10.5
Downstream geneH2-M10.6, Trim26, Trim15, Trim10, LOC100043164, Trim40, Trim31, Ppp1r11, Znrd1, 1700022C21Rik, H2-M6-ps, 2410137M14Rik, H2-M4-ps, D130003B22Rik, Zfp57, Mog, Gabbr1, Olfr90, Olfr91, Olfr92, EG224763, LOC667973, Olfr93, Olfr753-ps1, LOC630355, Ubd, Olfr94, Olfr95, Olfr96, Olfr97, Olfr754-ps1, Olfr98, H2-M3, Olfr755-ps1, Olfr99, Olfr756-ps1, Olfr101, Olfr102, Olfr103, Olfr104, GA_x5J8B7W5KGR-1115818-1115257, Olfr105, Olfr758-ps1, Olfr106, Olfr107, Olfr759-ps1, Olfr108, Olfr760-ps1, Olfr109, H2-M2, Olfr110, Olfr111, Olfr112, Olfr113, Olfr114, Olfr115, Olfr116, Olfr117, Olfr118, Olfr119, Scocp, Olfr120, Olfr1558-ps1, Olfr121, Olfr122, Olfr123
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-015B03.bB6Ng01-015B03.g
ACCDH849431DH849432
length1,047902
definitionDH849431|Mus musculus domesticus DNA, BAC clone: B6Ng01-015B03, 5' end.DH849432|Mus musculus domesticus DNA, BAC clone: B6Ng01-015B03, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcttcaccataaatttaacaactttttacacttaaaaattttatgg
gaaatttgtggtgatatggaaatttaggtgttggaggatgattttgtgca
ctgtgttttcaaattctgttttctgtacccagatacctggttgtagccca
gacattggtattgtcactattatgaagtttcacctgaattagtatcttat
aaaatgttttccatcatgttcttcggggtcaataatcttaaaactgaaca
cccgatagctaggcaggacaggaaaaaactccaatttcaggcccagagtg
agtgtgtggtgggagtcaaatggggatatagataaagaagcagggaagag
cttggctaagatgtcaggtaacaggtcagatggctaagaaggggcctaga
cctgcattccaggattagaatagctcagaatttggccagctattgtactt
aaagttgttaataaatataaaggtctttatgtcattatttggagcaagag
caagcttgtaatactgatttttttttttttttttttttttacaatttaca
atttacaagtcactttcttgatcattttaattttaatgtgtgactactaa
aacctttaaggtcttagtcaaactttgacctctttaaaaattacatttat
ggacacagtacacatgccatgtactgaaagaaaatgagattttgtatctt
gtgattcatgtaatatgagcctgagtcctgggggccgagaacaaagcaaa
acagacagggctgttgttaagacattcctaagaacagcttgattgtacaa
gcagggctatcttgtctgggtcaacaccacctggctgtgaacctcccctc
tgtctactgtcttgacaccgggaataagtcatacatcaacttggtggctt
ttgtgtactaagataagcccccagcccacaggaacaagtcctgatgccct
ttgctaacgtgtaatcttctgttaatgtttaatagccaatagtgtggtca
ctatgctgattcacacccctaggccctttaccgcataaacctctagc
gaattctgtttagctatgtgccccatttttaatttggttatctgatttgt
tggtttctaacttcttgagtttgttggaattttggatattaatatgctgt
cagatgtatggatggtgaaggtgctttcccaatctgtagcctgtggtttt
tcctattgacagtgtcctttactttgcagaacattttctgtttcaggggg
tcccattaatcacttgttcattttgcagcctgagccattaatattttgtt
ccagaacttctctccagtattattgtgttcaaggctcttccccaatttct
tatctactagatttggtttatctgattttactttgagatctttgatccac
ttggacttgagttttatgcagagtaataggtatgcttccctttgcaatct
tctacaggcagacatccattagaccagcaacatttgttgaagatactttt
ttgccactttataattttggagtttttgttaaaaatcaggtgtccataca
tgtgtgggtttatttcggggtcttcaattccattccattgatcaacctgt
tcgttcccatatgaaccaggcagttttcattactattgctttgtagtaca
gctttagttcaaggatggtgataattttagttcttttattttactggagt
cctacagcttaaaatcttctcgatgcaatttttaataataaatgctaaac
ctcccttctagaccactacacaccaaaggcagtgggaaagaaaggttggt
atcattatacagggagagtgaacctattagaatttgttctttggagcaaa
tctcatctgcattgtcagggaatcagccgttctgttcacaaaataagcag
cagcagtttgatccactgggcaagccacttcacaaatataccagcagtct
ag
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr17_36936852_36937900
seq2: B6Ng01-015B03.b_43_1089 (reverse)

seq1  GCTAGAGGTTTTTATGCGGTAAAGGGCTTAGGGGTGTGGAATTCAGCATA  50
      ||||||||  ||||||||||||||||| ||||||||||  | ||||||||
seq2  GCTAGAGG--TTTATGCGGTAAAGGGCCTAGGGGTGTG--AATCAGCATA  46

seq1  GTGA-CACACTATTGGCTTATTTAAACATTAACAGAAAGATTACACGTTA  99
      |||| |||||||||||||   |||||||||||||| ||||||||||||||
seq2  GTGACCACACTATTGGCT--ATTAAACATTAACAG-AAGATTACACGTTA  93

seq1  GCAAAAGGGCATCAGGACTTTGTTCCTGTGGGCTGGGGGCTTATCTT-GT  148
      || ||||||||||||||| |||||||||||||||||||||||||||| ||
seq2  GC-AAAGGGCATCAGGAC-TTGTTCCTGTGGGCTGGGGGCTTATCTTAGT  141

seq1  TCAC-ATAGCAACC-AGTTGATGTATGACTT-TATCCGGTGTCAAGACAG  195
       ||| | ||| ||| |||||||||||||||| |  |||||||||||||||
seq2  ACACAAAAGCCACCAAGTTGATGTATGACTTATTCCCGGTGTCAAGACAG  191

seq1  TAGACAGAGGGGAGGTTC-CAGCCAGGTGGTGTTGACCCAGACAAGATAG  244
      |||||||||||||||||| |||||||||||||||||||||||||||||||
seq2  TAGACAGAGGGGAGGTTCACAGCCAGGTGGTGTTGACCCAGACAAGATAG  241

seq1  CCCTGCTTGTACAATCAAGCTGTTCTTAGGAATGTCTTAACAACAGCCCT  294
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCTGCTTGTACAATCAAGCTGTTCTTAGGAATGTCTTAACAACAGCCCT  291

seq1  GTCTGTTTTGCTTTGTTCTCGG-CCCCAGGACTCAGGCTCATATTACATG  343
      |||||||||||||||||||||| |||||||||||||||||||||||||||
seq2  GTCTGTTTTGCTTTGTTCTCGGCCCCCAGGACTCAGGCTCATATTACATG  341

seq1  AATCACAAGATACAAAATCTCATTTTCTTTCAGTACATGGCATGTGTACT  393
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATCACAAGATACAAAATCTCATTTTCTTTCAGTACATGGCATGTGTACT  391

seq1  GTGTCCATAAATGTAATTTTTAAAGAGGTCAAAGTTTGACTAAGACCTTA  443
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTCCATAAATGTAATTTTTAAAGAGGTCAAAGTTTGACTAAGACCTTA  441

seq1  AAGGTTTTAGTAGTCACACATTAAAATTAAAATGATCAAGAAAGTGACTT  493
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGTTTTAGTAGTCACACATTAAAATTAAAATGATCAAGAAAGTGACTT  491

seq1  GTAAATTGTAAATTGTAAAAAAAAAAAAAAAAAAAAAAATCAGTATTACA  543
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAAATTGTAAATTGTAAAAAAAAAAAAAAAAAAAAAAATCAGTATTACA  541

seq1  AGCTTGCTCTTGCTCCAAATAATGACATAAAGACCTTTATATTTATTAAC  593
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTTGCTCTTGCTCCAAATAATGACATAAAGACCTTTATATTTATTAAC  591

seq1  AACTTTAAGTACAATAGCTGGCCAAATTCTGAGCTATTCTAATCCTGGAA  643
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTTTAAGTACAATAGCTGGCCAAATTCTGAGCTATTCTAATCCTGGAA  641

seq1  TGCAGGTCTAGGCCCCTTCTTAGCCATCTGACCTGTTACCTGACATCTTA  693
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCAGGTCTAGGCCCCTTCTTAGCCATCTGACCTGTTACCTGACATCTTA  691

seq1  GCCAAGCTCTTCCCTGCTTCTTTATCTATATCCCCATTTGACTCCCACCA  743
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCAAGCTCTTCCCTGCTTCTTTATCTATATCCCCATTTGACTCCCACCA  741

seq1  CACACTCACTCTGGGCCTGAAATTGGAGTTTTTTCCTGTCCTGCCTAGCT  793
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACACTCACTCTGGGCCTGAAATTGGAGTTTTTTCCTGTCCTGCCTAGCT  791

seq1  ATCGGGTGTTCAGTTTTAAGATTATTGACCCCGAAGAACATGATGGAAAA  843
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCGGGTGTTCAGTTTTAAGATTATTGACCCCGAAGAACATGATGGAAAA  841

seq1  CATTTTATAAGATACTAATTCAGGTGAAACTTCATAATAGTGACAATACC  893
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTTTATAAGATACTAATTCAGGTGAAACTTCATAATAGTGACAATACC  891

seq1  AATGTCTGGGCTACAACCAGGTATCTGGGTACAGAAAACAGAATTTGAAA  943
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGTCTGGGCTACAACCAGGTATCTGGGTACAGAAAACAGAATTTGAAA  941

seq1  ACACAGTGCACAAAATCATCCTCCAACACCTAAATTTCCATATCACCACA  993
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACAGTGCACAAAATCATCCTCCAACACCTAAATTTCCATATCACCACA  991

seq1  AATTTCCCATAAAATTTTTAAGTGTAAAAAGTTGTTAAATTTATGGTGAA  1043
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTTCCCATAAAATTTTTAAGTGTAAAAAGTTGTTAAATTTATGGTGAA  1041

seq1  GAATTC  1049
      ||||||
seq2  GAATTC  1047