BAC Information

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BAC

Clone NameB6Ng01-015C09
Chromosome17 (Build37)
Map Location 37,789,595 - 37,790,376
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC620340, H2-M1, LOC667912, LOC100043158, LOC667915, H2-M10.5, H2-M10.6, Trim26, Trim15, Trim10, LOC100043164, Trim40, Trim31, Ppp1r11, Znrd1, 1700022C21Rik, H2-M6-ps, 2410137M14Rik, H2-M4-ps, D130003B22Rik, Zfp57, Mog, Gabbr1, Olfr90, Olfr91, Olfr92, EG224763, LOC667973, Olfr93, Olfr753-ps1, LOC630355, Ubd, Olfr94, Olfr95, Olfr96, Olfr97, Olfr754-ps1, Olfr98, H2-M3, Olfr755-ps1, Olfr99, Olfr756-ps1, Olfr101, Olfr102, Olfr103, Olfr104, GA_x5J8B7W5KGR-1115818-1115257, Olfr105, Olfr758-ps1, Olfr106, Olfr107, Olfr759-ps1, Olfr108, Olfr760-ps1, Olfr109, H2-M2, Olfr110, Olfr111, Olfr112, Olfr113, Olfr114, Olfr115, Olfr116
Downstream geneOlfr117, Olfr118, Olfr119, Scocp, Olfr120, Olfr1558-ps1, Olfr121, Olfr122, Olfr123, Olfr124, Olfr125, LOC672822, Olfr126, Olfr127, Olfr128, Ppia-ps17_697.1, Olfr761, Olfr1552-ps1, LOC100043265, Olfr129, Olfr130, Olfr131, Olfr132, Olfr133, Olfr134, Olfr135, Olfr138, Olfr137, Olfr762-ps1, Olfr136, LOC626985
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-015C09.g
ACCDH849488
length783
definitionDH849488|Mus musculus domesticus DNA, BAC clone: B6Ng01-015C09, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcacatttttaacatatgtttttatgattctctgaatttccttgtt
gtctgttgtaatgtttttgtttctaaatgtattaattaggatcttctctc
tacatttttggaagtttgtcaatctcttggattttctcaaagaactaatt
cttgtttcattgaaaccttatattgatttctgttttgtttttatttcata
gatgctttccctctgtttccttgtttcttgatgtttattttgggtgtatt
aatatttttctagagatttcaagcatctcatgaatttatcaacatgcagt
ttctccacagttttttgtttgttttgttttgtttctttttttaagttaat
acctttaatgttatataaaattaattgtatattatgtaattatacaaaca
tgcccacatatacattatatgtagtaaatacatagcatatatacacgcta
tgtgtctaaaagactttttcaaacattcttattgtttatttttttaagtt
tcgattaagaattttcctcatttacgtttccgatgcaattccaaaaagtc
caccataccctttcccccaatcccctacccacccattcccactttttggc
actgccgttttcctgtactggggcatataaagtttgcaagtccaatgggc
ctcttttttccagtgatgactgactaggtcatcttttgatacatatgcag
ctagagtcaagagctccggggtactagttagttcataatgttgttccact
tatagcgttgcagatccctttagctccttgggt
quality valuesOpen.




Alignment Information

BAC End 1BAC End 2
seq1: chr17_37789595_37790376
seq2: B6Ng01-015C09.g_68_850 (reverse)

seq1  ACCCAAGGAGCTAAAGGGATCTGCAACGCTATAAGTGGAACAACATTATG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCCAAGGAGCTAAAGGGATCTGCAACGCTATAAGTGGAACAACATTATG  50

seq1  AACTAACTAGTACCCCGGAGCTCTTGACTCTAGCTGCATATGTATCAAAA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTAACTAGTACCCCGGAGCTCTTGACTCTAGCTGCATATGTATCAAAA  100

seq1  GATGACCTAGTCAGTCATCACTGG-AAAAAGAGGCCCATTGGACTTGCAA  149
      |||||||||||||||||||||||| |||||||||||||||||||||||||
seq2  GATGACCTAGTCAGTCATCACTGGAAAAAAGAGGCCCATTGGACTTGCAA  150

seq1  ACTTTATATGCCCCAGTACAGGAAAACGGCAGTGCCAAAAAGTGGGAATG  199
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTTATATGCCCCAGTACAGGAAAACGGCAGTGCCAAAAAGTGGGAATG  200

seq1  GGTGGGTAGGGGATTGGGGGAAAGGGTATGGTGGACTTTTTGGAATTGCA  249
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTGGGTAGGGGATTGGGGGAAAGGGTATGGTGGACTTTTTGGAATTGCA  250

seq1  TTGGAAATGTAAATGAGGAAAATTCCTAATAGAAACTTAAAAAAATAAAC  299
      | ||||| ||||||||||||||||| |||| |||||||||||||||||||
seq2  TCGGAAACGTAAATGAGGAAAATTCTTAATCGAAACTTAAAAAAATAAAC  300

seq1  AATAAGAATGTTTGAAAAAGTCTTTTAGACACATAGCGTGTATATATGCT  349
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATAAGAATGTTTGAAAAAGTCTTTTAGACACATAGCGTGTATATATGCT  350

seq1  ATGTATTTACTACATATAATCTATATGTGGGCATGTTTGTATAATTACAT  399
      |||||||||||||||||||| |||||||||||||||||||||||||||||
seq2  ATGTATTTACTACATATAATGTATATGTGGGCATGTTTGTATAATTACAT  400

seq1  AATATACAATTAATTTTATATAACATTAAAGGTATTAACTTAAAAAAAGA  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATATACAATTAATTTTATATAACATTAAAGGTATTAACTTAAAAAAAGA  450

seq1  AACAAAACAAAACAAACAAAAAACTCTGGAGAAACTGCATGTTGATAAAT  499
      ||||||||||||||||||||||||| ||||||||||||||||||||||||
seq2  AACAAAACAAAACAAACAAAAAACTGTGGAGAAACTGCATGTTGATAAAT  500

seq1  TCATGAGATGCTTGAAATCTCTAGAAAAATATTAATACACCCAAAATAAA  549
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATGAGATGCTTGAAATCTCTAGAAAAATATTAATACACCCAAAATAAA  550

seq1  CATCAAGAAACAAGGAAACAGAGGGAAAGCATCTATGAAATAAAAACAAA  599
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATCAAGAAACAAGGAAACAGAGGGAAAGCATCTATGAAATAAAAACAAA  600

seq1  ACAGAAATCAATATAAGGTTTCAATGAAACAAGAATTAGTTCTTTGAGAA  649
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGAAATCAATATAAGGTTTCAATGAAACAAGAATTAGTTCTTTGAGAA  650

seq1  AATCCAAGAGATTGACAAACTTCCAAAAATGTAGAGAGAAGATCCTAATT  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATCCAAGAGATTGACAAACTTCCAAAAATGTAGAGAGAAGATCCTAATT  700

seq1  AATACATTTAGAAACAAAAACATTACAACAGACAACAAGGAAATTCAGAG  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATACATTTAGAAACAAAAACATTACAACAGACAACAAGGAAATTCAGAG  750

seq1  AATCATAAAAACATATGTTAAAAATCTGAATTC  782
      ||||||||||||||||||||||||| |||||||
seq2  AATCATAAAAACATATGTTAAAAATGTGAATTC  783