BAC Information

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BAC

Clone NameB6Ng01-016I13
Chromosome17 (Build37)
Map Location 17,283,286 - 17,284,033
singlet/doubletsinglet
Overlap geneZfp97
Upstream geneLOC100041383, LOC100041394, LOC213781, LOC100041407, LOC665072, EG383211, LOC626785, LOC665085, BC002059, BC018101
Downstream geneEG382161, LOC676238, EG626854, LOC100041965, Riok2, Lix1, LOC383297, Lnpep, EG665140, LOC100041519, EG626942, 4930546H06Rik, Has1, Fpr1, Fpr-rs2, LOC665183, LOC670250, EG665187, LOC546683, Fprl1, LOC627060, Fpr-rs4, EG637021, EG665210
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-016I13.bB6Ng01-016I13.g
ACCDH850470DH850471
length975757
definitionDH850470|Mus musculus domesticus DNA, BAC clone: B6Ng01-016I13, 5' end.DH850471|Mus musculus domesticus DNA, BAC clone: B6Ng01-016I13, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcataaaagaacacatactggagagataccctatgaatgtaaccag
tgtggcaaagcctttacacaattttttcctcttaaacgtcatgaaataac
acataccaaagagaaaccctatgaatgtaaacaatgtggcaaagccttta
cacgccacagtactcttcaaatccataaaagaacacatactggagaaaaa
cccgtatgaatgtaatcaatgtggcaaagcctttgcaggtcacagtactc
ttcaaaatcataaaagaatacatactggagagaaaccctatgaatttaac
cagtgtagcaaagcttttacacaatttgttcatcttcagtgtcatcaaag
gttacatactggagagaaaccctatgaatgtaaataatgtgtcaaagcct
ttacatgtcacagtactcttcaaatccgtaaaagaacacgtactggagaa
aaaccctgtgtatgtaaacaatgtggcaaagcctttgcatgtcacagtac
tccatgaattcataaaagaacacatactggagagataccctatgaatgta
accagtgtggtaaaacctttgcacgacacagtcagcttcaaacacataaa
agaatacatattgaagaaaaacccggataatgcagtgaatgtgataaagg
ctttgttattgtagtctgaaaaggaattttaaaaacaaattcttgtgaaa
accctataaatgtaatcaatctaataaagccatttgttagcagtcacctt
ctaagggatgcaacatagtttatgggaatatagtggggtgggtgtgtctg
attcttttgcctactctcaagatggttcatgtcttaattattgctttgcg
aggtttgatatgagtgtttgtgcctattttatcaaaaatatggtatgcct
gttcatttgctatctccgagtatgctgctctgtttcaggggaaatggtag
aatatatgggtgtgacgttagtttg
gaattcaattccaaacagacaacttcaaatggctgagaaacacttgaaga
aatgttctccatccttagccaatatggaaatgcaaataaatacttcatta
taattccatagtacacatgtcagaatgggtacgatcacaccaatgattgt
tcatacttgataaaaagtaagtttgcatccactgttctgcttgtaggtat
gcaaactaatacaaatgttatggaaatcaatatcatgatgtcttaggaaa
gtgggagtttatatacaagatccatctatatcagtcttgggaaaaacaca
aagggaactccatccacaaaaatgaaaagacacatgctcaactatgtaca
tagcagctttatttgtactagccagaagctaaagacaacatagatgtctt
aaagctaaagaatgaagaaagaaaatgtgctatgattatataatggaagt
atcactaacctactaaaataaaacaacataaatgaatgcatgaaaacagg
ctaatgaatgcacctataagaaatatcacactaaatcaggtaatccaaaa
tctggaatgacagtaatggtatatattcagtgataaatggatactaggct
ttaggtaaactataatcaagctatcctccagagattcagagaggtcatgt
aaagagaagagatatgtaggggattcatggatcttgttggaaaggggaac
tagagtgaacaatccaggtagactgaggtgaatgggaaatggatggggag
ggaactt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr17_17283286_17284033
seq2: B6Ng01-016I13.b_276_1021

seq1  CCTTTGCAGGTCACAGTACTCTTCAAAATCATAAAAGAATACATACTGGA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTTGCAGGTCACAGTACTCTTCAAAATCATAAAAGAATACATACTGGA  50

seq1  GAGAAACCCTATGAATTTAACCAGTGTAGCAAAGCTTTTACACAATTTGT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGAAACCCTATGAATTTAACCAGTGTAGCAAAGCTTTTACACAATTTGT  100

seq1  TCATCTTCAGTGTCATCAAAGGTTACATACTGGAGAGAAACCCTATGAAT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATCTTCAGTGTCATCAAAGGTTACATACTGGAGAGAAACCCTATGAAT  150

seq1  GTAAATAATGTGTCAAAGCCTTTACATGTCACAGTACTCTTCAAATCCGT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAAATAATGTGTCAAAGCCTTTACATGTCACAGTACTCTTCAAATCCGT  200

seq1  AAAAGAACACGTACTGGAGAAAAACCCTGTGTATGTAAACAATGTGGCAA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAGAACACGTACTGGAGAAAAACCCTGTGTATGTAAACAATGTGGCAA  250

seq1  AGCCTTTGCATGTCACAGTACTCCATGAATTCATAAAAGAACACATACTG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCCTTTGCATGTCACAGTACTCCATGAATTCATAAAAGAACACATACTG  300

seq1  GAGAGATACCCTATGAATGTAACCAGTGTGGTAAAACCTTTGCACGACAC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGAGATACCCTATGAATGTAACCAGTGTGGTAAAACCTTTGCACGACAC  350

seq1  AGTCAGCTTCAAACACATAAAAGAATACATATTGAAGAAAAACCCGGATA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTCAGCTTCAAACACATAAAAGAATACATATTGAAGAAAAACCCGGATA  400

seq1  ATGCAGTGAATGTGATAAAGGCTTTGTTATTGTAGTCTGAAAAGGAATTT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGCAGTGAATGTGATAAAGGCTTTGTTATTGTAGTCTGAAAAGGAATTT  450

seq1  TAAAAACAAATTCTTGTGAAAACCCTATAAATGTAATCAATCTAATAAAG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAAACAAATTCTTGTGAAAACCCTATAAATGTAATCAATCTAATAAAG  500

seq1  CCATTTGTTAGCAGTCACCTTCTAAGGGATGCAACATAGTTTATGGGAAT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCATTTGTTAGCAGTCACCTTCTAAGGGATGCAACATAGTTTATGGGAAT  550

seq1  ATAGT-GGGTGGGTGTGTCTGATTCTTTTGCCTACTCTCGAGATGGTTCA  599
      ||||| ||||||||||||||||||||||||||||||||| ||||||||||
seq2  ATAGTGGGGTGGGTGTGTCTGATTCTTTTGCCTACTCTCAAGATGGTTCA  600

seq1  TGTCTTAATTATTTGCTTTGCGAGGTTTGATATGAGTGTTTGTGCCTATT  649
      ||||||||||| |||||||||||||||||||||||||||||||||||| |
seq2  TGTCTTAATTA-TTGCTTTGCGAGGTTTGATATGAGTGTTTGTGCCTA-T  648

seq1  TTTATC-AAAATATGGTATGCCTTGTTCATTTGCTATCTCTGAGTATGCT  698
      |||||| ||||||||||||||| ||||||||||||||||| |||||||||
seq2  TTTATCAAAAATATGGTATGCC-TGTTCATTTGCTATCTCCGAGTATGCT  697

seq1  GCTCTGTTTTCAGGGGAAATGGTAGAATATATGGGTGTGATGTTAGTTTG  748
      |||||| ||||||||||||||||||||||||||||||||| |||||||||
seq2  GCTCTG-TTTCAGGGGAAATGGTAGAATATATGGGTGTGACGTTAGTTTG  746