BAC Information

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BAC

Clone NameB6Ng01-016N14
Chromosome17 (Build37)
Map Location 61,137,440 - 61,138,518
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC100043549
Downstream geneLOC433129, EG620725, LOC100043560
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-016N14.bB6Ng01-016N14.g
ACCDH850697DH850698
length8981,069
definitionDH850697|Mus musculus domesticus DNA, BAC clone: B6Ng01-016N14, 5' end.DH850698|Mus musculus domesticus DNA, BAC clone: B6Ng01-016N14, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctaccaaatgtttgtttgtttatttgctttttctgtgtctgaatt
ttttataactaattattttatttatttatacctcaaattttgcccacctc
cttgtaccccccttgcagagttcttccttccatctgcccacctgttcacc
tctgagagggtaaccccacccgaggttatcacctaccctggggcatcatg
tctctacaggatcaacaggattgatgcatcatctcccactgaggacagac
aaggcaccccacagttatatatgttcctggggcctctgaccagcctgtgt
ttgctctttggttggtggttcaatttctagaagctcccagagatccaggt
tagttgatactgtttggcttcctatggggttgccaccccctgaagttcct
tcaatccttcccctaactcttccataggggtccccgacctcaatccaatg
cttgcttgtctcggtcagctgctggtagagcctctcagaggacagccatg
atagattcctgtctgcaagcacaacatagtatcagtaataatgacttcat
gaatttttcaggtaaatgaactaaagtagaaaatgtcttcctttgtgagg
taacccaaaccgaaaaggacatacatagtatgtactctctggtaagtgga
tattacccaaaaagtacagaatacctatgatacaccccaagtgaggatgc
ttaaatcccacttagaaaggggaacaaaataataatataaggtagaggag
gtgagggtcctggatgggagacctggagaggagaagggaagaggagggca
ggttctagtattttgggataggcaggagagaccaagagggtcagaaaaaa
tggatgggaaatatgcagctgcaagggatgagggtggggtggtgggga

gaattcacatttcaagtgaaattatcaggtggaatttaggtatcatttct
aaagctgtactatctccctcaatgaataaattatgaaatttccatagaaa
gttacagtacataatattaaaaccaaggcatttttttgtatgaaccattg
ttgtgacacactgtatcttttcaaaaggcagaacatgcctatggacactc
taaaagtaaaggcatgattaatgatagactttcaattaaatcaaatcact
gtcatagaaaactatatatgtgtgaactcatctagaggaaaaattttgcc
tgaatactaagaagatgtagagtaaacaaaaatattcactaataactaga
gcctcacaggtcaccaatatataggtaaatcactaaagcctaaagagaaa
ctccaagttactctgacagctaaattgactttgtccaattctaatcattg
atttataaatagaaattcagaattgcacagcattatgatttataaatggc
cagggcgagcaaacacatacaatctgcccctgattcaaggtgccgagtac
acattttcaaatgcattgtttcttattacataccatctagggatttcact
ttacaaaatatatatagacatatttcttttggagtgagtaaaaagatgac
agagtcttcatgtgagaaaatgaatgctagttagggatataaaagattat
agggagacaatattgctctaagctttttcatttaaataattgctggcaac
aaaaaagtaaattctgagacaaaagatctttaataatactttgaaatctg
tttatacactgcaataagctatatatgtgcactgacaaataagagcaatg
gagtttatacagaattcagacttatttgtgccaatgccatttacctgaag
agtaggaaaataatcaggaaaagaggaggcttatgaaatgcatttatcaa
ctgagttagtgtttctggaaacaggaaattgcactctagattgaggagtg
tgaggtataatttttaaccaccaatgagcatggaggagagagtacacagt
cataagaaatactgacata
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr17_61137440_61138518
seq2: B6Ng01-016N14.g_68_1136

seq1  GAATTCACATTTCAAGTGAAATTATCAGGTGGAATTTAGGTATCATTTCT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCACATTTCAAGTGAAATTATCAGGTGGAATTTAGGTATCATTTCT  50

seq1  AAAGCTGTACTATCTCCCTCAATGAATAAATTATGAAATTTCCATAGAAA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGCTGTACTATCTCCCTCAATGAATAAATTATGAAATTTCCATAGAAA  100

seq1  GTTACAGTACATAATATTAAAACCAAGGCATTTTTTTGTATGAACCATTG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTACAGTACATAATATTAAAACCAAGGCATTTTTTTGTATGAACCATTG  150

seq1  TTGTGACACACTGTATCTTTTCAAAAGGCAGAACATGCCTATGGACACTC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTGACACACTGTATCTTTTCAAAAGGCAGAACATGCCTATGGACACTC  200

seq1  TAAAAGTAAAGGCATGATTAATGATAGACTTTCAATTAAATCAAATCACT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAAGTAAAGGCATGATTAATGATAGACTTTCAATTAAATCAAATCACT  250

seq1  GTCATAGAAAACTATATATGTGTGAACTCATCTAGAGGAAAAATTTTGCC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCATAGAAAACTATATATGTGTGAACTCATCTAGAGGAAAAATTTTGCC  300

seq1  TGAATACTAAGAAGATGTAGAGTAAACAAAAATATTCACTAATAACTAGA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAATACTAAGAAGATGTAGAGTAAACAAAAATATTCACTAATAACTAGA  350

seq1  GCCTCACAGGTCACCAATATATAGGTAAATCACTAAAGCCTAAAGAGAAA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCTCACAGGTCACCAATATATAGGTAAATCACTAAAGCCTAAAGAGAAA  400

seq1  CTCCAAGTTACTCTGACAGCTAAATTGACTTTGTCCAATTCTAATCATTG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCCAAGTTACTCTGACAGCTAAATTGACTTTGTCCAATTCTAATCATTG  450

seq1  ATTTATAAATAGAAATTCAGAATTGCACAGCATTATGATTTATAAATGGC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTATAAATAGAAATTCAGAATTGCACAGCATTATGATTTATAAATGGC  500

seq1  CAGGGCGAGCAAACACATACAATCTGCCCCTGATTCAAGGTGCCGAGTAC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGGCGAGCAAACACATACAATCTGCCCCTGATTCAAGGTGCCGAGTAC  550

seq1  ACATTTTCAAATGCATTGTTTCTTATTACATACCATCTAGGGATTTCACT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATTTTCAAATGCATTGTTTCTTATTACATACCATCTAGGGATTTCACT  600

seq1  TTACAAAATATATATAGACATATTTCTTTTGGAGTGAGTAAAAAGATGAC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTACAAAATATATATAGACATATTTCTTTTGGAGTGAGTAAAAAGATGAC  650

seq1  AGAGTCTTCATGTGAGAAAATGAATGCTAGTTAGGGATAT-AAAGATTAT  699
      |||||||||||||||||||||||||||||||||||||||| |||||||||
seq2  AGAGTCTTCATGTGAGAAAATGAATGCTAGTTAGGGATATAAAAGATTAT  700

seq1  AGGGAGACAATATTGCTCTAAGCTTTTTCATTTAAATAATTGCTGGCAAC  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGGAGACAATATTGCTCTAAGCTTTTTCATTTAAATAATTGCTGGCAAC  750

seq1  AAAAAAGTAAATTCTGAGACAAAAGATCTTTAATAATACTTTGAAATCTG  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAAAGTAAATTCTGAGACAAAAGATCTTTAATAATACTTTGAAATCTG  800

seq1  TTTATACACTGCAATAAGCTATATATGTGCACTGACAAATAAGAGCAATG  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTATACACTGCAATAAGCTATATATGTGCACTGACAAATAAGAGCAATG  850

seq1  GAGTTTATACAGAATTCAGACTTATTTGTGCCAATGCCATTTACCTGAAG  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGTTTATACAGAATTCAGACTTATTTGTGCCAATGCCATTTACCTGAAG  900

seq1  AGTAGG-AAATAATCAGGAAAAAGAGAAGGCTTATGAAATGCATTTATCA  948
      |||||| ||||||||||| ||||||| |||||||||||||||||||||||
seq2  AGTAGGAAAATAATCAGG-AAAAGAGGAGGCTTATGAAATGCATTTATCA  949

seq1  ACTGAGTTAGTGTTTCTGGAAACAGGAAATTGCACTCTAGAATTGAGGAG  998
      |||||||||||||||||||||||||||||||||||||||| |||||||||
seq2  ACTGAGTTAGTGTTTCTGGAAACAGGAAATTGCACTCTAG-ATTGAGGAG  998

seq1  TGTGAAGGTATAATTTTTTAAAACCACCCAATTGAGCATGGAGGAGAGAG  1048
      |||| |||||||||||||   |||||||  | ||||||||||||||||||
seq2  TGTG-AGGTATAATTTTT---AACCACC--AATGAGCATGGAGGAGAGAG  1042

seq1  TACACAAGTCAATAAAGAAAATACTGACATA  1079
      ||||| |||| ||||   |||||||||||||
seq2  TACAC-AGTC-ATAA--GAAATACTGACATA  1069


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