BAC Information

Click to search

BAC

Clone NameB6Ng01-017L23
Chromosome17 (Build37)
Map Location 21,569,043 - 21,569,687
singlet/doubletsinglet
Overlap geneZfp54
Upstream geneEG627805, V1re5, EG627814, EG381065, EG224582, Fpr-rs3, EG433073, V1re2, V1re6, LOC100041976, V1re3, V1re1, V1re8, V1re7, V1re4, LOC627884, Ppp2r1a, V1rf5, Zfp160, LOC627912, LOC435509, EG627924, 4933430A09, EG665654, EG665662, LOC665666, EG665669, V1rf1, V1rf2, V1rf4, V1rf3, A830058L05Rik
Downstream geneZfp51, Zfp53, LOC100042508, Zfp52, BC049807, Zfp760, BC043476, 4930515G13Rik, 2610036F08Rik, LOC624960, 3110048L19Rik, 4930432O21Rik, LOC665820, LOC665825, LOC674332, LOC631010, EG665844, EG210853, LOC671007, EG240038, EG631624, 6330416L07Rik, Zfp758, 1300003B13Rik
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-017L23.bB6Ng01-017L23.g
ACCDH851340DH851341
length1,148645
definitionDH851340|Mus musculus domesticus DNA, BAC clone: B6Ng01-017L23, 5' end.DH851341|Mus musculus domesticus DNA, BAC clone: B6Ng01-017L23, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctcacctgaggaataccgaatggcagagaagcacctgaaaaaatg
ttcaacatccttaatcatcagggaaatgcaaatcaaaacaaccctgagat
tccacctcacaccagtgagaatggctaagatcaaaaattcaggtgacagc
agatgctggcgaggatgtggagaaagaggaacactcctccattgttggtg
ggattgcaggcttgtacaaccactctggaaatcagtctggcggttcctca
gaaaattggacatagtactaccggaggatccagcaatacctctcctgggc
atatatccagaagaagccccaactggtaagaaggacacatgctccactat
gttcatagcagccttatttataatagccagaaactggaaagaacccagat
gcccctcaacagaggaatggatacagaaaatgtggtacatctacacaatg
gagtactactcagctattaaaaagaatgaatttatgaaattcctagccaa
atggatggacctggagagcatcatcctgagtgaggtaacacaatcacaaa
ggaactcacacaatatgtactcactgataagtggatactagcccaaaacc
taggatacccacgatataagatacaatttcctaaacacatgaaactcaag
aaaaatgaagactgaagtgtggacactatgcccctccttagaagtgggaa
caaaacacccatggaaggagttacagaaacaaagtttggagctgagatga
aaggatggaccatgtagagactgccatatccagggatccaccccataatc
agcatccaaacgctgacaccattacatatactagcaagattttatcgaaa
ggacccagatgtagctgtctcttgtgagactatgccggggcctagcaaac
acagaagtggatgctcacagtcagctaatggatggatcacagggctccca
atggaggagctagagaaagtacccacgagctaaagggatctcaccctata
gtggacacatatgactacagtaccctgagctctgactctagctgcatatg
tatcaaagatgcctagtcggcatcactgaagaaagcccattgaccgcaga
ctgtgtgcccggtatgggacgcaagtcaaggggggggagtggtgtttc
gaattcctgatcatttaatttacagtgcatctgcctattgtaactgttag
aagacattgtgccttagtgcacctgaattgtggtgacttaatactggtat
aaaatgcaattttacttagctatgatgacatcagattaggataattttac
aaattataagcctaatgtgagtccatgaaatagcattgttctgtaattgc
cttccttatatgtaggtattcattcatattacatccttcattttcttctc
agtggaggatacacagacacctttctggaagatgatctcaggagtcagtg
tagaaagttgacttaaaaacaactatgtggccaggcggtggtggtgcacg
cttttaatcccagctcttgggaggcaaaggcaggtggatttctgagttca
aggccagcctggtctagagtgagttccaggacagccagggctatacagag
aaaccctgtctcaaaaaaaaaacaaaaaaacaaaaccaaaacaaaacaaa
acaaaacaaacaagcaaacaaaaaaccccaactatataaggaaagttaag
aaacatagcagtggatgttccaggatgggatagataaccaatagtggtcc
tctcctctgtcagagctgaaggggaggagaaatggggggggggaa
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr17_21569043_21569687
seq2: B6Ng01-017L23.g_66_710

seq1  GAATTCCTGATCATTTAATTTACAGTGCATCTGCCTATTGTAACTGTTAG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCTGATCATTTAATTTACAGTGCATCTGCCTATTGTAACTGTTAG  50

seq1  AAGACATTGTGCCTTAGTGCACCTGAATTGTGGTGACTTAATACTGGTAT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGACATTGTGCCTTAGTGCACCTGAATTGTGGTGACTTAATACTGGTAT  100

seq1  AAAATGCAATTTTACTTAGCTATGATGACATCAGATTAGGATAATTTTAC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAATGCAATTTTACTTAGCTATGATGACATCAGATTAGGATAATTTTAC  150

seq1  AAATTATAAGCCTAATGTGAGTCCATGAAATAGCATTGTTCTGTAATTGC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATTATAAGCCTAATGTGAGTCCATGAAATAGCATTGTTCTGTAATTGC  200

seq1  CTTCCTTATATGTAGGTATTCATTCATATTACATCCTTCATTTTCTTCTC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCCTTATATGTAGGTATTCATTCATATTACATCCTTCATTTTCTTCTC  250

seq1  AGTGGAGGATACACAGACACCTTTCTGGAAGATGATCTCAGGAGTCAGTG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTGGAGGATACACAGACACCTTTCTGGAAGATGATCTCAGGAGTCAGTG  300

seq1  TAGAAAGTTGACTTAAAAACAACTATGTGGCCAGGCGGTGGTGGTGCACG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGAAAGTTGACTTAAAAACAACTATGTGGCCAGGCGGTGGTGGTGCACG  350

seq1  CTTTTAATCCCAGCTCTTGGGAGGCAAAGGCAGGTGGATTTCTGAGTTCA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTTAATCCCAGCTCTTGGGAGGCAAAGGCAGGTGGATTTCTGAGTTCA  400

seq1  AGGCCAGCCTGGTCTAGAGTGAGTTCCAGGACAGCCAGGGCTATACAGAG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGCCAGCCTGGTCTAGAGTGAGTTCCAGGACAGCCAGGGCTATACAGAG  450

seq1  AAACCCTGTCTCAAAAAAAAAACAAAAAAACAAAACCAAAACAAAACAAA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACCCTGTCTCAAAAAAAAAACAAAAAAACAAAACCAAAACAAAACAAA  500

seq1  ACAAAACAAACAAGCAAACAAAAAACCCCAACTATATAAGGAAAGTTAAG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAAAACAAACAAGCAAACAAAAAACCCCAACTATATAAGGAAAGTTAAG  550

seq1  AAACATAGCAGTGGATGTTCCAGGATGGGATAGATAACCAATAGTGGTCC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACATAGCAGTGGATGTTCCAGGATGGGATAGATAACCAATAGTGGTCC  600

seq1  TCTCCTCTGTCAGAGCTGAAGGGGAGGAGAAATGGGGGGGGGGAA  645
      |||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCCTCTGTCAGAGCTGAAGGGGAGGAGAAATGGGGGGGGGGAA  645