BAC Information

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BAC

Clone NameB6Ng01-018E15
Chromosome17 (Build37)
Map Location 59,848,920 - 59,987,546
singlet/doubletdoublet
Overlap genenone
Upstream geneLOC668648, 2610034M16Rik, Nudt12, 4930505H01Rik, LOC100043537, LOC100043542
Downstream geneLOC100043549
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-018E15.bB6Ng01-018E15.g
ACCDH851732DH851733
length1,0611,163
definitionDH851732|Mus musculus domesticus DNA, BAC clone: B6Ng01-018E15, 5' end.DH851733|Mus musculus domesticus DNA, BAC clone: B6Ng01-018E15, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(59,848,920 - 59,849,992)(59,986,368 - 59,987,546)
sequence
gaattcagttgtcttgatataatttctgcaactaaaataatatttgagtc
ttaaaaatattaattttctgttgtgagaatcatacgtatgttgtcaatca
tatgtctctagtaagattgtgtccaatattatttccttcagatatatgac
ttatctaatattattccctaacattatcctgttcttttgagaaatatagt
atgtagcttttcaaataattatgtctaaatctctgttttcattctcatta
gcttacaggaatttcaatggaaattttctatgtgtcacaaaaactttcaa
ttctgttctgctcaacgttcatcccccacattactattgtaatatattat
attgcaatattgtaatatgttataatgtattgtaatatcttataaagaaa
ttgttaccataagtctaaaagaacagccttaaaatttaagattttttata
catattctgggtttcaaacttctacttatagataacaaatcctctccagt
ttatttccctaagtatattgtattttctggacagaagatggaccacaaaa
acaaataaaacaaatgctgcagagcttttgtgtggacagagttgttaaat
gaataaacagtgaaggtcacggttagatacaaggagtggctcctgcgcac
acttttgagacaaattattataggtttcatagtttaatatttattaaaca
attgtacataagtttgttcatacatgcaaaaatagggcaagtgttcttgc
ctatagtttaccaagttataattaattttcagagtattggtttttctact
ttttccacatcattttcagcatgaaaaatctgtaaaaatcattgattcta
cattcttgttgtagcaacagggatatcttaatgaagacaacctcattctg
aaacagttctccacacacacacacacatgagaaagaggtcgggggaagag
gaaggcagggatgggcagagaaacagagcgataactagcaggctgagtta
gttctctagtggactccatctgtagttgtgattctttggacaccattctt
cccggagtcac
gaattcacattcaataagaaaaaaaaaatcagattcccaagatctaagtt
acaaagccaaaaatgtttactgaagggattaggcataatacatgctctcc
ctgtatctaatttaggatgccttgcactctttgacttctccagatcactg
tttttgttaagaccaaaggaacacaagactgtttcacagatgatctgata
tttaatcatccacaaagaactaattattacgataaataaaatctaattat
gacttctgagaagttggtgcaaaaatgagagtaaagtttatgcttaaatg
ctttatatgattccaatgttatatgagtatatagtaaaagtaaaattata
atggtcaaatattgatatttcataaatcaaactgaacatttaatttcttt
gtgtctgattcctagaaaacgcataacttgttattcacatgtgtgttata
taaggaagaaaataaatgaattttcccaaaatataataaactatgtcttt
acaaattgattttactagttcacaatcccaatgaacccaattccctggaa
atattagtacaaatgacatagataaaaatttctatcttcagaagattctc
atatatactagaaaatacagtagacaaatgcagcttttcagacaggaata
atcagaagaaaaagatttgaaattggtatattagtttttaataaaatcac
agcttcaggctttgtggtttaacacatataatgaggagaacaatcctttt
ttgacttctactgaatatattaacaaaatattttatatgactgtcttagt
cagagtttctattatgcacaaacatcatgaccaagaagcagttggggagg
aaagaatttattcagcttacatttccacattgctgttcatcactgaaaaa
agtcaggactggacttcagcaggtcagagagcaggagctgatgcagaggc
catggaggatgtcttactggcttatttcccctggcttgctcagctactct
cttatgacccaaactactagctcagagatggtccacccacaagggccttc
tccttgatcacttattgagaaaatgctttacagcttgtattcattgagca
tttccctactgagctctttcctctggtaactcccacctgtgtcaggtgga
cacaaaattagcc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr17_59848920_59849992
seq2: B6Ng01-018E15.b_40_1100

seq1  GAATTCAGTTGTCTTGATATAATTTCTGCAACTAAAATAATATTTGAGTC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAGTTGTCTTGATATAATTTCTGCAACTAAAATAATATTTGAGTC  50

seq1  TTAAAAATATTAATTTTCTGTTGTGAGAATCATACGTATGTTGTCAATCA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAAAAATATTAATTTTCTGTTGTGAGAATCATACGTATGTTGTCAATCA  100

seq1  TATGTCTCTAGTAAGATTGTGTCCAATATTATTTCCTTCAGATATATGAC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATGTCTCTAGTAAGATTGTGTCCAATATTATTTCCTTCAGATATATGAC  150

seq1  TTATCTAATATTATTCCCTAACATTATCCTGTTCTTTTGAGAAATATAGT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATCTAATATTATTCCCTAACATTATCCTGTTCTTTTGAGAAATATAGT  200

seq1  ATGTAGCTTTTCAAATAATTATGTCTAAATCTCTGTTTTCATTCTCATTA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTAGCTTTTCAAATAATTATGTCTAAATCTCTGTTTTCATTCTCATTA  250

seq1  GCTTACAGGAATTTCAATGGAAATTTTCTATGTGTCACAAAAACTTTCAA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTTACAGGAATTTCAATGGAAATTTTCTATGTGTCACAAAAACTTTCAA  300

seq1  TTCTGTTCTGCTCAACGTTCATCCCCCACATTACTATTGTAATATATTAT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTGTTCTGCTCAACGTTCATCCCCCACATTACTATTGTAATATATTAT  350

seq1  ATTGCAATATTGTAATATGTTATAATGTATTGTAATATCTTATAAAGAAA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTGCAATATTGTAATATGTTATAATGTATTGTAATATCTTATAAAGAAA  400

seq1  TTGTTACCATAAGTCTAAAAGAACAGCCTTAAAATTTAAGATTTTTTATA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTTACCATAAGTCTAAAAGAACAGCCTTAAAATTTAAGATTTTTTATA  450

seq1  CATATTCTGGGTTTCAAACTTCTACTTATAGATAACAAATCCTCTCCAGT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATATTCTGGGTTTCAAACTTCTACTTATAGATAACAAATCCTCTCCAGT  500

seq1  TTATTTCCCTAAGTATATTGTATTTTCTGGACAGAAGATGGACCACAAAA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATTTCCCTAAGTATATTGTATTTTCTGGACAGAAGATGGACCACAAAA  550

seq1  ACAAATAAAACAAATGCTGCAGAGCTTTTGTGTGGACAGAGTTGTTAAAT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAAATAAAACAAATGCTGCAGAGCTTTTGTGTGGACAGAGTTGTTAAAT  600

seq1  GAATAAACAGTGAAGGTCACGGTTAGATACAAGGAGTGGCTCCTGCGCAC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATAAACAGTGAAGGTCACGGTTAGATACAAGGAGTGGCTCCTGCGCAC  650

seq1  ACTTTTGAGACAAATTATTATAGGTTTCATAGTTTAATATTTATTAAACA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTTTGAGACAAATTATTATAGGTTTCATAGTTTAATATTTATTAAACA  700

seq1  ATTGTACATAAGTTTGTTCATACATGCAAAAATAGGGCAAGTGTTCTTGC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTGTACATAAGTTTGTTCATACATGCAAAAATAGGGCAAGTGTTCTTGC  750

seq1  CTATAGTTTACCAAGTTATAATTAATTTTCAGAGTATTGGTTTTTCTACT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTATAGTTTACCAAGTTATAATTAATTTTCAGAGTATTGGTTTTTCTACT  800

seq1  TTTTCCACATCATTTTCAGCATGAAAAATCTGTAAAAATCATTGATTCTA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTCCACATCATTTTCAGCATGAAAAATCTGTAAAAATCATTGATTCTA  850

seq1  CATTCTTGTTGTAGCAACAGGGATATCTTAATGAAGACAACCTCATTTCT  900
      ||||||||||||||||||||||||||||||||||||||||||||| ||||
seq2  CATTCTTGTTGTAGCAACAGGGATATCTTAATGAAGACAACCTCA-TTCT  899

seq1  GAAACAGTTCTCCACACACACACACACATGAGAAAGAGGTTGGGGGAAGA  950
      |||||||||||||||||||||||||||||||||||||||| |||||||||
seq2  GAAACAGTTCTCCACACACACACACACATGAGAAAGAGGTCGGGGGAAGA  949

seq1  GGAAGGCAGGGATGGGCAGAGAAACAGAGCGATAACTAGCAGCCAGAGTT  1000
      |||||||||||||||||||||||||||||||||||||||||| | |||||
seq2  GGAAGGCAGGGATGGGCAGAGAAACAGAGCGATAACTAGCAGGCTGAGTT  999

seq1  AAGTTCTCTAAGTGGTACTCAATCTGTAGTTGGTGATTCCTTTGGGATCA  1050
       |||||||| ||||| |||| |||||||||| |||||| ||||||    |
seq2  -AGTTCTCT-AGTGG-ACTCCATCTGTAGTT-GTGATT-CTTTGG----A  1040

seq1  ACCAATTCTTTCACCGGAGTCAC  1073
        | ||||||   ||||||||||
seq2  CACCATTCTT--CCCGGAGTCAC  1061

seq1: chr17_59986368_59987546
seq2: B6Ng01-018E15.g_66_1228 (reverse)

seq1  GGCTAATTTTGTGTCAACTTGACACAGCTGGAGGTATCACAGAGAAAGGA  50
      ||||||||||||||| || |||||||| |||  || |  ||||| || ||
seq2  GGCTAATTTTGTGTCCACCTGACACAGGTGGGAGT-TACCAGAGGAAAGA  49

seq1  GCTTCAGTTGGGGAAATGCCTCCATGAGATCCAGCTGTAAGGCATTTTCT  100
      || |||| | |||||||| ||| ||||   | |||||||| |||||||||
seq2  GC-TCAG-TAGGGAAATG-CTCAATGAATACAAGCTGTAAAGCATTTTCT  96

seq1  CAATTAGTGATCAAGGGGGAAAGGCCCCTTGTGGGTGGGACCATCTCTGG  150
      |||| ||||||||||| |  |||| ||||||||||| |||||||||||| 
seq2  CAATAAGTGATCAAGGAG--AAGG-CCCTTGTGGGT-GGACCATCTCTGA  142

seq1  GCTAGTAGTCTTGGGTTCTATAAGAGAGTAGGCTGAGCAAGCCAGGGGAA  200
      ||||||||| ||||||   ||||||||||| |||||||||||||||||||
seq2  GCTAGTAGT-TTGGGT--CATAAGAGAGTA-GCTGAGCAAGCCAGGGGAA  188

seq1  ATAAGCCAGTAAAGAACATCCCTCCATGGCCTCTGCATCAGCTCCTGCTC  250
      ||||||||||||   |||| ||||||||||||||||||||||||||||||
seq2  ATAAGCCAGTAA--GACAT-CCTCCATGGCCTCTGCATCAGCTCCTGCTC  235

seq1  TCTGACCTGCTGAAGTTCCAGTCCTGACTTTTTTCAGTGATGAACAGCAA  300
      ||||||||||||||| ||||||||||||||||||||||||||||||||||
seq2  TCTGACCTGCTGAAG-TCCAGTCCTGACTTTTTTCAGTGATGAACAGCAA  284

seq1  TGTGGAAATGTAAGCTGAATAAATTCTTTCCTCCCCAACTGCTTCTTGGT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGGAAATGTAAGCTGAATAAATTCTTTCCTCCCCAACTGCTTCTTGGT  334

seq1  CATGATGTTTGTGCATAATAGAAACTCTGACTAAGACAGTCATATAAAAT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGATGTTTGTGCATAATAGAAACTCTGACTAAGACAGTCATATAAAAT  384

seq1  ATTTTGTTAATATATTCAGTAGAAGTCAAAAAAGGATTGTTCTCCTCATT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTTGTTAATATATTCAGTAGAAGTCAAAAAAGGATTGTTCTCCTCATT  434

seq1  ATATGTGTTAAACCACAAAGCCTGAAGCTGTGATTTTATTAAAAACTAAT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATGTGTTAAACCACAAAGCCTGAAGCTGTGATTTTATTAAAAACTAAT  484

seq1  ATACCAATTTCAAATCTTTTTCTTCTGATTATTCCTGTCTGAAAAGCTGC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATACCAATTTCAAATCTTTTTCTTCTGATTATTCCTGTCTGAAAAGCTGC  534

seq1  ATTTGTCTACTGTATTTTCTAGTATATATGAGAATCTTCTGAAGATAGAA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTGTCTACTGTATTTTCTAGTATATATGAGAATCTTCTGAAGATAGAA  584

seq1  ATTTTTATCTATGTCATTTGTACTAATATTTCCAGGGAATTGGGTTCATT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTTTATCTATGTCATTTGTACTAATATTTCCAGGGAATTGGGTTCATT  634

seq1  GGGATTGTGAACTAGTAAAATCAATTTGTAAAGACATAGTTTATTATATT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGATTGTGAACTAGTAAAATCAATTTGTAAAGACATAGTTTATTATATT  684

seq1  TTGGGAAAATTCATTTATTTTCTTCCTTATATAACACACATGTGAATAAC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGGGAAAATTCATTTATTTTCTTCCTTATATAACACACATGTGAATAAC  734

seq1  AAGTTATGCGTTTTCTAGGAATCAGACACAAAGAAATTAAATGTTCAGTT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTTATGCGTTTTCTAGGAATCAGACACAAAGAAATTAAATGTTCAGTT  784

seq1  TGATTTATGAAATATCAATATTTGACCATTATAATTTTACTTTTACTATA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGATTTATGAAATATCAATATTTGACCATTATAATTTTACTTTTACTATA  834

seq1  TACTCATATAACATTGGAATCATATAAAGCATTTAAGCATAAACTTTACT  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACTCATATAACATTGGAATCATATAAAGCATTTAAGCATAAACTTTACT  884

seq1  CTCATTTTTGCACCAACTTCTCAGAAGTCATAATTAGATTTTATTTATCG  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCATTTTTGCACCAACTTCTCAGAAGTCATAATTAGATTTTATTTATCG  934

seq1  TAATAATTAGTTCTTTGTGGATGATTAAATATCAGATCATCTGTGAAACA  1000
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATAATTAGTTCTTTGTGGATGATTAAATATCAGATCATCTGTGAAACA  984

seq1  GTCTTGTGTTCCTTTGGTCTTAACAAAAACAGTGATCTGGAGAAGTCAAA  1050
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCTTGTGTTCCTTTGGTCTTAACAAAAACAGTGATCTGGAGAAGTCAAA  1034

seq1  GAGTGCAAGGCATCCTAAATTAGATACAGGGAGAGCATGTATTATGCCTA  1100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGTGCAAGGCATCCTAAATTAGATACAGGGAGAGCATGTATTATGCCTA  1084

seq1  ATCCCTTCAGTAAACATTTTTGGCTTTGTAACTTAGATCTTGGGAATCTG  1150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCCCTTCAGTAAACATTTTTGGCTTTGTAACTTAGATCTTGGGAATCTG  1134

seq1  ATTTTTTTTTTCTTATTGAATGTGAATTC  1179
      |||||||||||||||||||||||||||||
seq2  ATTTTTTTTTTCTTATTGAATGTGAATTC  1163