BAC Information

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BAC

Clone NameB6Ng01-018G19
Chromosome17 (Build37)
Map Location 68,843,842 - 68,844,891
singlet/doubletsinglet
Overlap genenone
Upstream geneLrrc30, Lama1, Arhgap28, D930040M24Rik
Downstream geneEG622645, Epb4.1l3, 2410021H03Rik, Zfp161, C030034I22Rik, A930029G22Rik, A330050F15Rik, LOC100043623
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-018G19.bB6Ng01-018G19.g
ACCDH851830DH851831
length1,0431,169
definitionDH851830|Mus musculus domesticus DNA, BAC clone: B6Ng01-018G19, 5' end.DH851831|Mus musculus domesticus DNA, BAC clone: B6Ng01-018G19, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattccaaaggagttacttattgaggcccactggtccagtcctggtccc
ctcagtatatacaaattctctctcggggcagccccatgccttcatctacc
ttcattagatgtcccatagcctgagccatctccaatatcttgtggtcttc
attgcttttggggaccatgctgccacaaaggcaactactacaggagaacc
taattgaagatgacctgagagaccaaggattgctgacagacagggccaga
caatcaggaacagttgtttgaaagagatacttgcttgggaccaatgagac
aagggtggagggtattaaaggagctttcagcagtgttcataagagcttgc
tgctgcattctcacctgttcccagagtctgtgccattgattctatgccac
ctcttctccaactcccaagggctagtagggttgggcaactggctgtccag
ggcataagcagcacttcgcaatgtgggtttcatcttcactacatcataaa
atggctacttgtgtcattgtaggcattgtactcaatcttgtttctctcat
gtcttcaaagtagtagcagctaatactgatgaacttggaatgctgccagc
ttaagggggagccctgcccatctggaccatagctgtatcagctttacctc
ctaaccctttgacattcttgcctagggagttgcttttgaggagcaagaaa
caccctcgactttattggtagttcaggtggctgcatgtttacaagtttgg
gtgcctttcatgatggggtctagccttcaaggtaccttttctgttgcctt
agtgccttgccttgtctgaaacttacacttgctcacacatcttccttcta
cctagaaaattagtttactatcttcatcaaaatactaaatactaagtgac
aaagagataaaacagaattcttgacatagatagatagattgatagataga
tagatagatagatagatagatagtttaccttcctcatccaatactaaata
caagtgacaaagtaagaataaaataataattcctgaccctaga
gaattctcacctgaggaataccgaatggcagagaagcacctgaaaaaatg
ttcaacatccttaatcgtcagggaaatgcaaatcaaaacaaccctgagat
tccacctcacaccagtcagaatggctaagatcaaaaatttaggtgacagc
agatgctggccaggatgtggagaaagaggaacactcctccattgttagtg
ggattgcaagcttatacaaccactctggaaatcagtctggcggtacctca
gaaaagtgaacatagtactaccggaggatcccgcaatacctctcctgggc
atatatccagaagatgtcccaactggtaagaaggacacatgctccactat
gttcatagcagccttatttataatagccagaagctggaaagaacccagat
gcccctcaacagaggaatggatacagaaaatgtgctacatttacacaatg
gagtactactcagctattaaaaagaatgaatttatgaaattcctaggcaa
atggatggacctggagggcatcatcctgagtgaggtaacccaatcacaaa
ggaactcacacaaaatgtactcactgataagtggatattagcccagatac
ttaggatacccaagatataagatacaatttgctaaactcctgaaactcaa
gaagaacaaagaccaaagtgtggacactttgccccttcttagaattggga
acaaaacacccatggaaggagttacagagacaaagtttggagctgtgacg
aaaggatggaccatctagagactgccatatgcagggatccatcccataat
cagcttccaaacgctgacaccattgcacacactagcaagattttgctgaa
aggaccctgatatagctgtctcttgtgagactatgccggggcctagcaaa
tataaaagtggatgctcacagtcagctattggacggatcacagggcccca
atggagagctagagaaagtacccaaggagctaaagggatatgcaccctat
aggtggaacaacattatgaactaccagtattccctgagctccttgactct
agctgcaatatgtatctaaggatgcctagtcgcatcctgtaaaagagagc
cattgaacttgcaacctttatggctagttacaggattacagtgcaaattg
gagatgggtgtggacgtta
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr17_68843842_68844891
seq2: B6Ng01-018G19.b_42_1084

seq1  GAATTCCAAAGGAGTTACTTATTGAGGCCCACTGGTCCAGTCCTGGTCCC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCAAAGGAGTTACTTATTGAGGCCCACTGGTCCAGTCCTGGTCCC  50

seq1  CTCAGTATATACAAATTCTCTCTCGGGGCAGCCCCATGCCTTCATCTACC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCAGTATATACAAATTCTCTCTCGGGGCAGCCCCATGCCTTCATCTACC  100

seq1  TTCATTAGATGTCCCATAGCCTGAGCCATCTCCAATATCTTGTGGTCTTC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCATTAGATGTCCCATAGCCTGAGCCATCTCCAATATCTTGTGGTCTTC  150

seq1  ATTGCTTTTGGGGACCATGCTGCCACAAAGGCAACTACTACAGGAGAACC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTGCTTTTGGGGACCATGCTGCCACAAAGGCAACTACTACAGGAGAACC  200

seq1  TAATTGAAGATGACCTGAGAGACCAAGGATTGCTGACAGACAGGGCCAGA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATTGAAGATGACCTGAGAGACCAAGGATTGCTGACAGACAGGGCCAGA  250

seq1  CAATCAGGAACAGTTGTTTGAAAGAGATACTTGCTTGGGACCAATGAGAC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAATCAGGAACAGTTGTTTGAAAGAGATACTTGCTTGGGACCAATGAGAC  300

seq1  AAGGGTGGAGGGTATTAAAGGAGCTTTCAGCAGTGTTCATAAGAGCTTGC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGGTGGAGGGTATTAAAGGAGCTTTCAGCAGTGTTCATAAGAGCTTGC  350

seq1  TGCTGCATTCTCACCTGTTCCCAGAGTCTGTGCCATTGATTCTATGCCAC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTGCATTCTCACCTGTTCCCAGAGTCTGTGCCATTGATTCTATGCCAC  400

seq1  CTCTTCTCCAACTCCCAAGGGCTAGTAGGGTTGGGCAACTGGCTGTCCAG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTTCTCCAACTCCCAAGGGCTAGTAGGGTTGGGCAACTGGCTGTCCAG  450

seq1  GGCATAAGCAGCACTTCGCAATGTGGGTTTCATCTTCACTACATCATAAA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCATAAGCAGCACTTCGCAATGTGGGTTTCATCTTCACTACATCATAAA  500

seq1  ATGGCTACTTGTGTCATTGTAGGCATTGTACTCAATCTTGTTTCTCTCAT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGGCTACTTGTGTCATTGTAGGCATTGTACTCAATCTTGTTTCTCTCAT  550

seq1  GTCTTCAAAGTAGTAGCAGCTAATACTGATGAACTTGGAATGCTGCCAGC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCTTCAAAGTAGTAGCAGCTAATACTGATGAACTTGGAATGCTGCCAGC  600

seq1  TTAAGGGGGAGCCCTGCCCATCTGGACCATAGCTGTATCAGCTTTACCTC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAAGGGGGAGCCCTGCCCATCTGGACCATAGCTGTATCAGCTTTACCTC  650

seq1  CTAACCCTTTGACATTCTTGCCTAGGGAGTTGCTTTTGAGGAGCAAGAAA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAACCCTTTGACATTCTTGCCTAGGGAGTTGCTTTTGAGGAGCAAGAAA  700

seq1  CACCCTCGACTTTATTGGTAGTTCAGGTGGCTGCATGTTTACAAGTTTGG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACCCTCGACTTTATTGGTAGTTCAGGTGGCTGCATGTTTACAAGTTTGG  750

seq1  GTGCCTTTCATGATGGGGTCTAGCCTTCAAGGTACCTTTTCTGTTGCCTT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGCCTTTCATGATGGGGTCTAGCCTTCAAGGTACCTTTTCTGTTGCCTT  800

seq1  AGTGCCTTGCCTTGTCTGAAACTTACACTTGCTCACACATCTTCCTTCTA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTGCCTTGCCTTGTCTGAAACTTACACTTGCTCACACATCTTCCTTCTA  850

seq1  CCTAGAAAATTAGTTTACTATCTTCATCAAAATACTAAATACTAAGTGAC  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTAGAAAATTAGTTTACTATCTTCATCAAAATACTAAATACTAAGTGAC  900

seq1  AAAGAAGAATAAAACAGAATTCTTGACAATAGATAGATAGATAGATAGAT  950
      |||||   |||||||||||||||||||     |||||||||||||| |||
seq2  AAAGA--GATAAAACAGAATTCTTGAC-----ATAGATAGATAGATTGAT  943

seq1  AGATAGATAGATAGATAGATAGATAGATAGTTTACTATCTTCATCCAAAT  1000
      |||||||||||||||||||||||||||||||||||  || |||||| |||
seq2  AGATAGATAGATAGATAGATAGATAGATAGTTTACCTTCCTCATCC-AAT  992

seq1  ACTAAATACCAAGTGACAAAG-AAGAATAAAAT-AGAATTCTTGACCATA  1048
      |||||||| |||||||||||| ||||||||||| | ||||| ||||| ||
seq2  ACTAAATA-CAAGTGACAAAGTAAGAATAAAATAATAATTCCTGACCCTA  1041

seq1  GA  1050
      ||
seq2  GA  1043