BAC Information

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BAC

Clone NameB6Ng01-019H09
Chromosome17 (Build37)9 (Build37)
Map Location 76,884,789 - 76,885,93612,839,283 - 12,839,316
singlet/doubletsingletsinglet
Overlap genenone
Upstream geneRasgrp3, 2810405J04Rik, LOC668787, LOC100043885, LOC100043886
Downstream geneEG624348, LOC545234
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-019H09.bB6Ng01-019H09.g
ACCDH852538DH852539
length1,14675
definitionDH852538|Mus musculus domesticus DNA, BAC clone: B6Ng01-019H09, 5' end.DH852539|Mus musculus domesticus DNA, BAC clone: B6Ng01-019H09, 3' end.
singlet/doubletsingletsinglet
BLAST hituniqueunique
Map location.(76,884,789 - 76,885,936)(12,839,283 - 12,839,316)
sequence
gaattctactggttggcttgcatactcatattttatttaagttaggcaca
tacaaaaacaattttgttgagttactcagtattcactaactatagtctag
tagataatactatagaaagtgtatcaaatactttgaaaggaatgagacta
tttagaggatattatattcaaagatagagcatgaaagaaaataattgatt
ttaaacatacaatatatgcaaaatttgaacttgcataggtcataatatga
tgttataaaagtggacaaaaacttgtgtcatggaaaggtacttaggttaa
cggggtttgcttttaaaatagacatttttgagctaaagtcaggcagaagt
gacaagttagttattggttcacatctcctaaattcaaaaggccactctct
gctccaaacatgtgactgctgcagaattttgctttgccattaaggaagac
actcttaccatagtgagtaacttatgatgcctgtgtgttacaaagctctg
gctaaaagcagaagaaattctttccaaatgaacagcataattcgttacta
tgtgccagagaaacatgccatattacttgttcttccacagtgatttgttt
gttttccaatgcaagaatgacccttctctcatgcttaccaaaaagccata
agagaaataaagatggcttctgttttctggacaaagagtattgattgttt
aacaaaccagtaaaggcgagttggtactagatggaaatcataataaccct
gtgatgatttctggggacaaaaatcaatagaaagggaatggtttttataa
aagatatacaacattattattataaaacctcagtcatcaagcagaggcat
ttaagtgtggcatgatgtattacttgaagggactgagatgctccaatgac
caaaatcacaacagctatttctgtcagtagttatcaccaacattttcccc
atctaaagagtccaggagtgcagaaatacttgctttcaatcccttagttt
gtctagttgttgttttacaatctgagcctttaaacatattggttcctttc
ccttgcctgaaaccctcctcccgaattattaatggcctcctttctattac
ctccttctcttattccaaacattacgtagcaagaatttaaaaacca
tttatgccccagtgtattggaatgccagggccaggaagcaggagtgggtg
gtttggtgagcagggggaggaggga
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr17_76884789_76885936
seq2: B6Ng01-019H09.b_46_1188 (reverse)

seq1  TTTTTAAATTCTTAGCTACGTAATTGTTTTGAAT-AGAGAAGGAGGTAAT  49
      ||||||||||||| ||||||||| ||||| |||| |||||||||||||||
seq2  TTTTTAAATTCTT-GCTACGTAA-TGTTTGGAATAAGAGAAGGAGGTAAT  48

seq1  AG-AAGGAAGCCATTAA-ATATCTGGAGGAAGAGTTTCAGGCAAAGGGAG  97
      || ||||| |||||||| |  || ||||| || ||||||||| |||||| 
seq2  AGAAAGGAGGCCATTAATAATTCGGGAGG-AGGGTTTCAGGC-AAGGGAA  96

seq1  AAGAAACAATATGTTTAAAGGCTCAGATGTAAAAACAAACAACTAGAACA  147
      | ||| ||||||||||||||||||||||   ||||| ||||||||| |||
seq2  AGGAACCAATATGTTTAAAGGCTCAGATTGTAAAAC-AACAACTAG-ACA  144

seq1  AACTAAGGGATTGAAAGCAAGTATTTCTGGCACTCCTGGACTCTGTAGAT  197
      |||||||||||||||||||||||||||| ||||||||||||||| |||||
seq2  AACTAAGGGATTGAAAGCAAGTATTTCT-GCACTCCTGGACTCTTTAGAT  193

seq1  GGGGAAAATGTTGGTGATAACTACTGACAGAAATAGCTGTTGTGATTTTG  247
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGGAAAATGTTGGTGATAACTACTGACAGAAATAGCTGTTGTGATTTTG  243

seq1  GTCATTGGAGCATCTCAGTCCCTTCAAGTAATACATCATGCCACACTTAA  297
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCATTGGAGCATCTCAGTCCCTTCAAGTAATACATCATGCCACACTTAA  293

seq1  ATGCCTCTGCTTGATGACCTGAGGTTTTATAATAATAATGTTGTATATCT  347
      ||||||||||||||||| ||||||||||||||||||||||||||||||||
seq2  ATGCCTCTGCTTGATGA-CTGAGGTTTTATAATAATAATGTTGTATATCT  342

seq1  TTTATAAAAACCATTCCCTTTCTATTGATTTTTGTCCCCAGAAATCATCA  397
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTATAAAAACCATTCCCTTTCTATTGATTTTTGTCCCCAGAAATCATCA  392

seq1  CAGGGTTATTATGATTTCCATCTAGTACCAACTCGCCTTTACTGGTTTGT  447
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGGTTATTATGATTTCCATCTAGTACCAACTCGCCTTTACTGGTTTGT  442

seq1  TAAACAATCAATACTCTTTGTCCAGAAAACAGAAGCCATCTTTATTTCTC  497
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAACAATCAATACTCTTTGTCCAGAAAACAGAAGCCATCTTTATTTCTC  492

seq1  TTATGGCTTTTTGGTAAGCATGAGAGAAGGGTCATTCTTGCATTGGAAAA  547
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATGGCTTTTTGGTAAGCATGAGAGAAGGGTCATTCTTGCATTGGAAAA  542

seq1  CAAACAAATCACTGTGGAAGAACAAGTAATATGGCATGTTTCTCTGGCAC  597
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAACAAATCACTGTGGAAGAACAAGTAATATGGCATGTTTCTCTGGCAC  592

seq1  ATAGTAACGAATTATGCTGTTCATTTGGAAAGAATTTCTTCTGCTTTTAG  647
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAGTAACGAATTATGCTGTTCATTTGGAAAGAATTTCTTCTGCTTTTAG  642

seq1  CCAGAGCTTTGTAACACACAGGCATCATAAGTTACTCACTATGGTAAGAG  697
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGAGCTTTGTAACACACAGGCATCATAAGTTACTCACTATGGTAAGAG  692

seq1  TGTCTTCCTTAATGGCAAAGCAAAATTCTGCAGCAGTCACATGTTTGGAG  747
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTCTTCCTTAATGGCAAAGCAAAATTCTGCAGCAGTCACATGTTTGGAG  742

seq1  CAGAGAGTGGCCTTTTGAATTTAGGAGATGTGAACCAATAACTAACTTGT  797
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGAGAGTGGCCTTTTGAATTTAGGAGATGTGAACCAATAACTAACTTGT  792

seq1  CACTTCTGCCTGACTTTAGCTCAAAAATGTCTATTTTAAAAGCAAACCCC  847
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACTTCTGCCTGACTTTAGCTCAAAAATGTCTATTTTAAAAGCAAACCCC  842

seq1  GTTAACCTAAGTACCTTTCCATGACACAAGTTTTTGTCCACTTTTATAAC  897
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTAACCTAAGTACCTTTCCATGACACAAGTTTTTGTCCACTTTTATAAC  892

seq1  ATCATATTATGACCTATGCAAGTTCAAATTTTGCATATATTGTATGTTTA  947
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCATATTATGACCTATGCAAGTTCAAATTTTGCATATATTGTATGTTTA  942

seq1  AAATCAATTATTTTCTTTCATGCTCTATCTTTGAATATAATATCCTCTAA  997
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATCAATTATTTTCTTTCATGCTCTATCTTTGAATATAATATCCTCTAA  992

seq1  ATAGTCTCATTCCTTTCAAAGTATTTGATACACTTTCTATAGTATTATCT  1047
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAGTCTCATTCCTTTCAAAGTATTTGATACACTTTCTATAGTATTATCT  1042

seq1  ACTAGACTATAGTTAGTGAATACTGAGTAACTCAACAAAATTGTTTTTGT  1097
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTAGACTATAGTTAGTGAATACTGAGTAACTCAACAAAATTGTTTTTGT  1092

seq1  ATGTGCCTAACTTAAATAAAATATGAGTATGCAAGCCAACCAGTAGAATT  1147
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTGCCTAACTTAAATAAAATATGAGTATGCAAGCCAACCAGTAGAATT  1142

seq1  C  1148
      |
seq2  C  1143

seq1: chr9_12839283_12839316
seq2: B6Ng01-019H09.g_117_150 (reverse)

seq1  TACCTCCTCCCCCTGCTCACCAACCCACCCACTC  34
      | ||||||||||||||||||||| ||||||||||
seq2  TCCCTCCTCCCCCTGCTCACCAAACCACCCACTC  34