BAC Information

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BAC

Clone NameB6Ng01-023H04
Chromosome17 (Build37)
Map Location 68,171,503 - 68,322,215
singlet/doubletdoublet
Overlap geneLama1, Arhgap28
Upstream genePtprm, Lrrc30
Downstream geneD930040M24Rik, EG622645
LinkOpen Mouse BAC browser

no map image available.



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-023H04.bB6Ng01-023H04.g
ACCDH855366DH855367
length1,1171,017
definitionDH855366|Mus musculus domesticus DNA, BAC clone: B6Ng01-023H04, 5' end.DH855367|Mus musculus domesticus DNA, BAC clone: B6Ng01-023H04, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(68,171,503 - 68,172,635)(68,321,197 - 68,322,215)
sequence
gaattctgctatccactaaacccacatgtgttatgatttgagagtcgttt
gaggtcatttttgtctcttttaatataccctatctcaacaaaattaagca
acccttgtccctttctccctgaacagcccacatcaaacagaactgcctga
gcagccgggcctcattccggggctgtgtgaggaacctcaggctgagcagg
ggctcacaagtgcagtccttggacctgagccgagcctttgacctacaagg
agtcttccctcattcctgccccgggcctgagccctaaactgtcgccagcc
tctgcccttggaatcatcgccaacgcatggaagagagcagtttgtgaact
caagcagctcagctcccattcccatcccattgccatctcaggttatgttt
ccagaggaaaatgctgtatttatgttgaactaaagccacacggacaacag
atacctctattaaatggtttaaaacgtcagtggaattaatggtctcctct
tttgagtttttcagatgggactttgtgggtgtgggatttttctgctgaag
actcgatagtgttcactggtttgcattttcagcatacaaaaaatgaaatg
tcacagcaggctgtattagatgagagcatagaatggataattctgttttt
taacgtttcatacactgggtagacggtcaggatctaagcacagcctaagc
tggtatttttaccaaagctttgttcaaaggctgacaatgggatccagagc
ctaagccacactgtattacgagggttgggatatagttagatgcctctcaa
cacaagcaactggggaaaatggggctgattttctaggacttgatgtcaac
aaattgccagtctctagaggggaacatgtcagtggttctcatttctttca
tcagacacactgtgtgcagtgcaggctggcttgaacttgcttcatacgga
caccagcttcccttccagttcctcagcctcctcctgactctccatgctgg
gcagagaggtaatggttttctgggcttgcttcctggcactctgtgcctag
cacaagattcaagccactttttttcttgagagtataagagcaaggaaatt
ttgtggtttcctatgaa
gaattcctccctttctactgcaggccagtctccaaaagactttcataagt
aacttggtgaggggggcccagtagttggaaagcttaattcaatcctaact
tcccacataggcagcgcatctggatggctgtttcatccaaggatgttcag
gggtttgggtcaaaagaaggcagcttttcagaaattagaagagagatgaa
agaaacgtaggtccttgaggcaagtaagaatgggagaagcctaagaagcc
tcatgagataggaagcctcattggaacatttaaggttgttcaaaatggga
ccctttccaggtcaaagggcgttgacactaacagttatgcttgggcctct
gggaaaatgattttcctgaccaaatagagatatatggttagtgtattgtt
gagtccttatattgtaaatgatattttgccttccctaaaatcagcttcat
tcgtgaacagcattgaagattttccttatttactaataaacatcaaaaca
ccaatcagcctttgtctccattgctcagtcatacgtagaaccacatatgt
ggggtcagagcattggcacggtaagtccctgccaaactcactttcagcct
cactgaatccgttagaatcgaaacaggccaactttcccaccaaccggctg
gtttgggggagccgccccccccccagtctgtccgtggcaccacctcctca
ctagaaataacagtgtccatctcagatttattgagggttagaaacagcct
tgcagagacctcggaccgagacctagataagcattggttgtccttcttac
gattcgttcccttgcattgcctttcattacttgcatccctttctctcttc
ctgccctaccttgaagatgttgcctgggggagcaggttttccagtgactg
ctcagagaacgctctccatcttctgtgcagagatgtgcgatgttgtttgt
agtgttcgcaatggaaaaattgtaattctttaaaaaggtggaaacgacta
tgggataaatcttcttt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr17_68171503_68172635
seq2: B6Ng01-023H04.b_44_1160

seq1  GAATTCTGCTATCCACTAAACCCACATGTGTTATGATTTGAGAGTCGTTT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTGCTATCCACTAAACCCACATGTGTTATGATTTGAGAGTCGTTT  50

seq1  GAGGTCATTTTTGTCTCTTTTAATATACCCTATCTCAACAAAATTAAGCA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGGTCATTTTTGTCTCTTTTAATATACCCTATCTCAACAAAATTAAGCA  100

seq1  ACCCTTGTCCCTTTCTCCCTGAACAGCCCACATCAAACAGAACTGCCTGA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCCTTGTCCCTTTCTCCCTGAACAGCCCACATCAAACAGAACTGCCTGA  150

seq1  GCAGCCGGGCCTCATTCCGGGGCTGTGTGAGGAACCTCAGGCTGAGCAGG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAGCCGGGCCTCATTCCGGGGCTGTGTGAGGAACCTCAGGCTGAGCAGG  200

seq1  GGCTCACAAGTGCAGTCCTTGGACCTGAGCCGAGCCTTTGACCTACAAGG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCTCACAAGTGCAGTCCTTGGACCTGAGCCGAGCCTTTGACCTACAAGG  250

seq1  AGTCTTCCCTCATTCCTGCCCCGGGCCTGAGCCCTAAACTGTCGCCAGCC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTCTTCCCTCATTCCTGCCCCGGGCCTGAGCCCTAAACTGTCGCCAGCC  300

seq1  TCTGCCCTTGGAATCATCGCCAACGCATGGAAGAGAGCAGTTTGTGAACT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGCCCTTGGAATCATCGCCAACGCATGGAAGAGAGCAGTTTGTGAACT  350

seq1  CAAGCAGCTCAGCTCCCATTCCCATCCCATTGCCATCTCAGGTTATGTTT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAGCAGCTCAGCTCCCATTCCCATCCCATTGCCATCTCAGGTTATGTTT  400

seq1  CCAGAGGAAAATGCTGTATTTATGTTGAACTAAAGCCACACGGACAACAG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGAGGAAAATGCTGTATTTATGTTGAACTAAAGCCACACGGACAACAG  450

seq1  ATACCTCTATTAAATGGTTTAAAACGTCAGTGGAATTAATGGTCTCCTCT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATACCTCTATTAAATGGTTTAAAACGTCAGTGGAATTAATGGTCTCCTCT  500

seq1  TTTGAGTTTTTCAGATGGGACTTTGTGGGTGTGGGATTTTTCTGCTGAAG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGAGTTTTTCAGATGGGACTTTGTGGGTGTGGGATTTTTCTGCTGAAG  550

seq1  ACTCGATAGTGTTCACTGGTTTGCATTTTCAGCATACAAAAAATGAAATG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTCGATAGTGTTCACTGGTTTGCATTTTCAGCATACAAAAAATGAAATG  600

seq1  TCACAGCAGGCTGTATTAGATGAGAGCATAGAATGGATAATTCTGTTTTT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCACAGCAGGCTGTATTAGATGAGAGCATAGAATGGATAATTCTGTTTTT  650

seq1  TAACGTTTCATACACTGGGTAGACGGTCAGGATCTAAGCACAGCCTAAGC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAACGTTTCATACACTGGGTAGACGGTCAGGATCTAAGCACAGCCTAAGC  700

seq1  TGGTATTTTTACCAAAGCTTTGTTCAAAGGCTGACAATGGGATCCAGAGC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGTATTTTTACCAAAGCTTTGTTCAAAGGCTGACAATGGGATCCAGAGC  750

seq1  CTAAGCCACACTGTATTACGAGGGTTGGGATATAGTTAGATGCCTCTCAA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAAGCCACACTGTATTACGAGGGTTGGGATATAGTTAGATGCCTCTCAA  800

seq1  CACAAGCAACT-GGGAAAATGGGGCTGATTTTCTAAGGACTTGATGTCAA  849
      ||||||||||| |||||||||||||||||||||| |||||||||||||||
seq2  CACAAGCAACTGGGGAAAATGGGGCTGATTTTCT-AGGACTTGATGTCAA  849

seq1  CAAA-TGCCAGTCTCTAGAGGGG-ACATGTCAGTGGTTCTCATTTCTTTT  897
      |||| |||||||||||||||||| |||||||||||||||||||||| |||
seq2  CAAATTGCCAGTCTCTAGAGGGGAACATGTCAGTGGTTCTCATTTC-TTT  898

seq1  CATCAGACACAACTGTGTGCAGTGCAGGCTGGCCTTGAACTTGCTTCATA  947
      |||||||||| ||||||||||||||||||||| |||||||||||||||| 
seq2  CATCAGACAC-ACTGTGTGCAGTGCAGGCTGG-CTTGAACTTGCTTCAT-  945

seq1  ACGGACACCAGCTTCCCTTCCCAGTTCCCTCAGCCTCCTCCCTGACCCCT  997
      ||||||||||||||||||| |||||| |||||||||||| ||||| | ||
seq2  ACGGACACCAGCTTCCCTT-CCAGTT-CCTCAGCCTCCT-CCTGA-CTCT  991

seq1  CCATGCTGGGCAGGAGATGTTAAATGGTTTTCTGGGCTTGCCTTCCTGGC  1047
      |||||||||||| |||| ||  |||||||||||||||||| |||||||||
seq2  CCATGCTGGGCA-GAGAGGT--AATGGTTTTCTGGGCTTG-CTTCCTGGC  1037

seq1  ATCTCTGTGCCTAGCACAAGGATGTCAAAGCCACTATTTTACCTGAGAGT  1097
      | ||||||||||||||||| ||| || |||||||| |||| | |||||| 
seq2  A-CTCTGTGCCTAGCACAA-GAT-TC-AAGCCACTTTTTTTCTTGAGAG-  1082

seq1  TATGAGGACAAGGAAATTATGTGTGTTTTCTATGAA  1133
      ||| ||  |||||||||| |||| |||| |||||||
seq2  TATAAGAGCAAGGAAATTTTGTG-GTTTCCTATGAA  1117

seq1: chr17_68321197_68322215
seq2: B6Ng01-023H04.g_68_1084 (reverse)

seq1  AAAGAAGAGATTTATCCCATTAGTCGGTTTCCACCTTTTTAAAGAATTAC  50
      |||||  |||||||||||| ||||| ||||||||||||||||||||||||
seq2  AAAGA--AGATTTATCCCA-TAGTC-GTTTCCACCTTTTTAAAGAATTAC  46

seq1  AATTTCTCCATTGCGAACACTATCAAAC-ACATCGCACATTCTCTGCACA  99
      ||||| |||||||||||||||| ||||| |||||||||| ||||||||||
seq2  AATTTTTCCATTGCGAACACTA-CAAACAACATCGCACA-TCTCTGCACA  94

seq1  G-AGCTGGAGAGCGTTCTCTGAGCAGTCACTGGGAAACCTGCT-CCCCAG  147
      | || |||||||||||||||||||||||||||| ||||||||| ||||||
seq2  GAAGATGGAGAGCGTTCTCTGAGCAGTCACTGGAAAACCTGCTCCCCCAG  144

seq1  GCAACATCTTCAAGGTAGGGCAGGAAGAGAGAAAGGGATGCAAGTAATG-  196
      ||||||||||||||||||||||||||||||||||||||||||||||||| 
seq2  GCAACATCTTCAAGGTAGGGCAGGAAGAGAGAAAGGGATGCAAGTAATGA  194

seq1  AAGGCAATGCAAGGGAACGAATCGTAAGAAGGACAACCAATGCTTATCTA  246
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGCAATGCAAGGGAACGAATCGTAAGAAGGACAACCAATGCTTATCTA  244

seq1  GGTCTCGGTCCGAGGTCTCTGCAAGGCTGTTTCTAACCCTCAATAAATCT  296
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTCTCGGTCCGAGGTCTCTGCAAGGCTGTTTCTAACCCTCAATAAATCT  294

seq1  GAGATGGACACTGTTATTTCTAGTGAGGAGGTGGTGCCACGGACAGACTG  346
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGATGGACACTGTTATTTCTAGTGAGGAGGTGGTGCCACGGACAGACTG  344

seq1  GGGGGGGGGCGGCTCCCCCAAACCAGCCGGTTGGTGGGAAAGTTGGCCTG  396
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGGGGGGGCGGCTCCCCCAAACCAGCCGGTTGGTGGGAAAGTTGGCCTG  394

seq1  TTTCGATTCTAACGGATTCAGTGAGGCTGAAAGTGAGTTTGGCAGGGACT  446
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCGATTCTAACGGATTCAGTGAGGCTGAAAGTGAGTTTGGCAGGGACT  444

seq1  TACCGTGCCAATGCTCTGACCCCACATATGTGGTTCTACGTATGACTGAG  496
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACCGTGCCAATGCTCTGACCCCACATATGTGGTTCTACGTATGACTGAG  494

seq1  CAATGGAGACAAAGGCTGATTGGTGTTTTGATGTTTATTAGTAAATAAGG  546
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAATGGAGACAAAGGCTGATTGGTGTTTTGATGTTTATTAGTAAATAAGG  544

seq1  AAAATCTTCAATGCTGTTCACGAATGAAGCTGATTTTAGGGAAGGCAAAA  596
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAATCTTCAATGCTGTTCACGAATGAAGCTGATTTTAGGGAAGGCAAAA  594

seq1  TATCATTTACAATATAAGGACTCAACAATACACTAACCATATATCTCTAT  646
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATCATTTACAATATAAGGACTCAACAATACACTAACCATATATCTCTAT  644

seq1  TTGGTCAGGAAAATCATTTTCCCAGAGGCCCAAGCATAACTGTTAGTGTC  696
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGGTCAGGAAAATCATTTTCCCAGAGGCCCAAGCATAACTGTTAGTGTC  694

seq1  AACGCCCTTTGACCTGGAAAGGGTCCCATTTTGAACAACCTTAAATGTTC  746
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACGCCCTTTGACCTGGAAAGGGTCCCATTTTGAACAACCTTAAATGTTC  744

seq1  CAATGAGGCTTCCTATCTCATGAGGCTTCTTAGGCTTCTCCCATTCTTAC  796
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAATGAGGCTTCCTATCTCATGAGGCTTCTTAGGCTTCTCCCATTCTTAC  794

seq1  TTGCCTCAAGGACCTACGTTTCTTTCATCTCTCTTCTAATTTCTGAAAAG  846
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGCCTCAAGGACCTACGTTTCTTTCATCTCTCTTCTAATTTCTGAAAAG  844

seq1  CTGCCTTCTTTTGACCCAAACCCCTGAACATCCTTGGATGAAACAGCCAT  896
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGCCTTCTTTTGACCCAAACCCCTGAACATCCTTGGATGAAACAGCCAT  894

seq1  CCAGATGCGCTGCCTATGTGGGAAGTTAGGATTGAATTAAGCTTTCCAAC  946
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGATGCGCTGCCTATGTGGGAAGTTAGGATTGAATTAAGCTTTCCAAC  944

seq1  TACTGGGCCCCCCTCACCAAGTTACTTATGAAAGTCTTTTGGAGACTGGC  996
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACTGGGCCCCCCTCACCAAGTTACTTATGAAAGTCTTTTGGAGACTGGC  994

seq1  CTGCAGTAGAAAGGGAGGAATTC  1019
      |||||||||||||||||||||||
seq2  CTGCAGTAGAAAGGGAGGAATTC  1017