BAC Information

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BAC

Clone NameB6Ng01-026G11
Chromosome17 (Build37)2 (Build37)
Map Location 17,369,747 - 17,370,646180,353,917 - 180,354,121
singlet/doubletsingletsinglet
Overlap genenone
Upstream geneLOC100041383, LOC100041394, LOC213781, LOC100041407, LOC665072, EG383211, LOC626785, LOC665085, BC002059, BC018101, Zfp97, EG382161
Downstream geneLOC676238, EG626854, LOC100041965, Riok2, Lix1, LOC383297, Lnpep, EG665140, LOC100041519, EG626942, 4930546H06Rik, Has1, Fpr1, Fpr-rs2, LOC665183, LOC670250, EG665187, LOC546683, Fprl1, LOC627060, Fpr-rs4, EG637021, EG665210, Vmn2r92
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-026G11.bB6Ng01-026G11.g
ACCDH857459DH857460
length901472
definitionDH857459|Mus musculus domesticus DNA, BAC clone: B6Ng01-026G11, 5' end.DH857460|Mus musculus domesticus DNA, BAC clone: B6Ng01-026G11, 3' end.
singlet/doubletsingletsinglet
BLAST hituniqueunique
Map location.(17,369,747 - 17,370,646)(180,353,917 - 180,354,121)
sequence
gaattctaggacagccaatgttacaaagagaaaccctgtctcaaaaaaac
cacacaaaataaaataaaataaaataaagaaggagaaggagaacacaaag
atgaagagaaagaagggaaatataagacttaaatagttgaaaaaagaaga
atagaagcataagacttaagatgtaggaatagatgaaaaggaacagagag
gaacaccccctccaccaccacctctacacaaaatacataaataaaaatga
ataagttgatccgaatagttcattaagactatgactattttgaatggata
caggcctgccattgctcaggaggaatgtgatgacttctgcaatagcatca
ccaataattggaaggccagtcaacagtcaatgtgcattctgagtaaagaa
gaggggtgtgtaatgcatcagatgtggaaggagtatctactttagggtag
cctgtcatgaaattaaattttccactttaaagaatttaaacttttattag
catagctagtaataaataaaaacaaaaatttgtatcctttcttggaattt
tgagataagtataatctacattgatagaaattttttaagtacttcaggaa
taccaaataatccacgaagtctatatttcctggtcaattttaaagaaatc
ttagtaatagtaacattgctttatgtaaaatgaattaattgggaaaaatg
tatcacgagtataagcaaggacactgcaaaaccactgaaattgactgctc
tgggattggataaatatatgtgttttcatacttttcacgctgcctctttt
ggatagaaagattggcaaaacttatgaaagccttgcatgttgaagaggta
aatttgcggtggcaatgagtgtataatggggatagtgtgggtgatatgta
c
gaattctttgttgaaatgtgttgtgtattacaactctatcatgtagagat
tggtaaaaaactatcctcacattccatactttgcctctttctttttctaa
ttaacttggcttttgccttacagaaacatcactatttcttgagttccaat
tctttaattgctgatcttaatgccttcgacattagtgtttttcagaagtc
tctgctgtgacagtgctgccggggatgttctgcccttagggttcactcag
ggtcactgtgtctggctttaagtcttttttttttttttggatggactctt
tttttttttaaaattttatttatttatttattttcagacactccaaaaaa
gggcatcccatctcattacacatggttgtgagccagcatgtggttgctgg
gatttgaactcaccaccttcggaagaacagtgggggctcttaaccacgga
gccatctcgccagccctggctt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr17_17369747_17370646
seq2: B6Ng01-026G11.b_45_940 (reverse)

seq1  TATCACCCACACTATCCCCAATTATACACTCATTGCCACCGCAAATTTAC  50
      ||||||||||||||||||| ||||||||||||||||||||||||||||||
seq2  TATCACCCACACTATCCCC-ATTATACACTCATTGCCACCGCAAATTTAC  49

seq1  CTCTTCAAACCCTGCAAGGCTTTCCTTAAGTTTTGCCAATCTTTCTATCC  100
      ||||||||  | ||||||||||| | ||||||||||||||||||||||||
seq2  CTCTTCAA--CATGCAAGGCTTT-CATAAGTTTTGCCAATCTTTCTATCC  96

seq1  AAAAGAGGCAGCCTGAAAAGTATGAAAACACATATATTTATCCAATCCCA  150
      |||||||||||| |||||||||||||||||||||||||||||||||||||
seq2  AAAAGAGGCAGCGTGAAAAGTATGAAAACACATATATTTATCCAATCCCA  146

seq1  GAGCAGTCAATTTCAGTGGTTTTGCAGTGTCCTTGCTTATACTCGTGATA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGCAGTCAATTTCAGTGGTTTTGCAGTGTCCTTGCTTATACTCGTGATA  196

seq1  CATTTTTCCCAATTAATTCATTTTACATAAAGCAATGTTACTATTACTAA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTTTTCCCAATTAATTCATTTTACATAAAGCAATGTTACTATTACTAA  246

seq1  GATTTCTTTAAAATTGACCAGGAAATATAGACTTCGTGGATTATTTGGTA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATTTCTTTAAAATTGACCAGGAAATATAGACTTCGTGGATTATTTGGTA  296

seq1  TTCCTGAAGTACTTAAAAAATTTCTATCAATGTAGATTATACTTATCTCA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCTGAAGTACTTAAAAAATTTCTATCAATGTAGATTATACTTATCTCA  346

seq1  AAATTCCAAGAAAGGATACAAATTTTTGTTTTTATTTATTACTAGCTATG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATTCCAAGAAAGGATACAAATTTTTGTTTTTATTTATTACTAGCTATG  396

seq1  CTAATAAAAGTTTAAATTCTTTAAAGTGGAAAATTTAATTTCATGACAGG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAATAAAAGTTTAAATTCTTTAAAGTGGAAAATTTAATTTCATGACAGG  446

seq1  CTACCCTAAAGTAGATACTCCTTCCACATCTGATGCATTACACACCCCTC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTACCCTAAAGTAGATACTCCTTCCACATCTGATGCATTACACACCCCTC  496

seq1  TTCTTTACTCAGAATGCACATTGACTGTTGACTGGCCTTCCAATTATTGG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTTTACTCAGAATGCACATTGACTGTTGACTGGCCTTCCAATTATTGG  546

seq1  TGATGCTATTGCAGAAGTCATCACATTCCTCCTGAGCAATGGCAGGCCTG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGATGCTATTGCAGAAGTCATCACATTCCTCCTGAGCAATGGCAGGCCTG  596

seq1  TATCCATTCAAAATAGTCATAGTCTTAATGAACTATTCGGATCAACTTAT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATCCATTCAAAATAGTCATAGTCTTAATGAACTATTCGGATCAACTTAT  646

seq1  TCATTTTTATTTATGTATTTTGTGTAGAGGTGGTGGTGGAGGGGGTGTTC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATTTTTATTTATGTATTTTGTGTAGAGGTGGTGGTGGAGGGGGTGTTC  696

seq1  CTCTCTGTTCCTTTTCATCTATTCCTACATCTTAAGTCTTATGCTTCTAT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTCTGTTCCTTTTCATCTATTCCTACATCTTAAGTCTTATGCTTCTAT  746

seq1  TCTTCTTTTTTCAACTATTTAAGTCTTATATTTCCCTTCTTTCTCTTCAT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTCTTTTTTCAACTATTTAAGTCTTATATTTCCCTTCTTTCTCTTCAT  796

seq1  CTTTGTGTTCTCCTTCTCCTTCTTTATTTTATTTTATTTTATTTTGTGTG  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTGTGTTCTCCTTCTCCTTCTTTATTTTATTTTATTTTATTTTGTGTG  846

seq1  GTTTTTTTGAGACAGGGTTTCTCTTTGTAACATTGGCTGTCCTAGAATTC  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTTTTTGAGACAGGGTTTCTCTTTGTAACATTGGCTGTCCTAGAATTC  896

seq1: chr2_180353917_180354121
seq2: B6Ng01-026G11.g_362_531 (reverse)

seq1  GGGCTGGTGAGATGGCTCAGTGGGTAAGAGCACCCGACTGCTCTTCCAAA  50
      ||||||| |||||||||| |||| ||||||| ||| |||| |||||| ||
seq2  GGGCTGGCGAGATGGCTCCGTGGTTAAGAGC-CCCCACTGTTCTTCCGAA  49

seq1  GGTCCAGAGTTCAAATCCCAGCAACCACATGGTGGCTCACAACCATCCGT  100
      |||   ||||||||||||||||||||||||| ||||||||||||||  ||
seq2  GGTGGTGAGTTCAAATCCCAGCAACCACATGCTGGCTCACAACCATGTGT  99

seq1  AATGAGATCTGACTCCCTCTTCTGGAGTGTCTGAAGATAGCTACAGTGTA  150
      ||||||||  ||  |||| || |||||||||||||               
seq2  AATGAGATGGGATGCCCTTTTTTGGAGTGTCTGAA---------------  134

seq1  CTTACATATAATAAATAAATAAATCTAAAAAAAAAATTATTTAAAAAAAA  200
               |||||||||||||||        |||||  |||||||||||
seq2  ---------AATAAATAAATAAAT--------AAAAT--TTTAAAAAAAA  165

seq1  AAAGA  205
      |||||
seq2  AAAGA  170