BAC Information

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BAC

Clone NameB6Ng01-031E17
Chromosome17 (Build37)
Map Location 83,162,280 - 83,291,037
singlet/doubletdoublet
Overlap genenone
Upstream geneEG668832, LOC100043707, LOC625467, LOC668836, EG433141, EG625514
Downstream geneLOC100043711, LOC100043900, AW548124, EG545226, Eml4, Cox7a2l, Kcng3, Mta3, Haao
LinkOpen Mouse BAC browser

no map image available.



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-031E17.bB6Ng01-031E17.g
ACCDH860955DH860956
length852526
definitionDH860955|Mus musculus domesticus DNA, BAC clone: B6Ng01-031E17, 5' end.DH860956|Mus musculus domesticus DNA, BAC clone: B6Ng01-031E17, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(83,290,186 - 83,291,037)(83,162,280 - 83,162,811)
sequence
gaattctctttaatgatctttctataaaactgtatttgctgttatttgaa
tggaatcattttatgccatcatttttcaggttggaatcataggaaataat
ttgcaattctcaaattttgttttaaaggtagtgatgcaatttctcttcaa
aatgctaagtttgtagaaattctggctgtatttatgtcaaaggcttgctg
tcaccagggcccactgtggacatgaaagcactgagagatggtgggggtgt
gttctcagggtgcttcaagagcaaaggaggcagaaatgtctgccaaatac
aaagaagggctatcatgatgttaagtctgggttaggacctcacagcatta
aatcttgaggactgaggaattgctatttgtctgatctgtctgtgaaagtt
tcagggactcaaggggatttattaacagtgggggcatcggagccttgact
gcttgtcgcatcaccttctgcaatagtaaatttgtctttgaagatatcta
gactctgtacttgatgttcttcactgatttaagccaggcgaggagacggt
aaatcaacttaccagcatccttgggaaggacagcaatctggaatgttaac
ttcccaagtgaaagtctcagaagtttctttttgacttcactttgtttgtt
tctaaaaaaaggacacaaagaggggaaaacgctacagactaagaatgtat
tttgaagagagtatttagaccacatgtccatttcctcatgtgggtacttt
ctaatatacctctttgagttccttttaaagttacactgtctgtccttatc
accttaagtgagctgagagattttgtcatttggactgtggcttttgtggg
tg
ctaagtccctctgtgtctgagttcataggaaagaagcacagaaatctgcc
ttacggcattctactgtactcagagatcagcgccttgctcagacatcttc
agcgaatattccccctgcatcagataagaataaatacacatatgtatagc
ctgacattatgcagaaagtgagaaactgtgggatattcaaccccaaacag
gatgtctccatcaaatacctcctgtcagagttcaaggaaagaagagatgg
agaactccaagaaaatagggccctctaaatggacaggatggatgcacgta
cgaaatcacagagcctgaggcagcatgtccatggccttcacaggtccacc
caagatgggaaattaagagctgaaaggagaagggaatacatgcctccatc
cttaacacaaagctatcgcccagtgataggcatgcaaacaaaaatttact
tttctccaagacagtctcactgggaaaacaagctactcttaaggatcggc
tgaattcccagctgtagatacccaag
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr17_83290186_83291037
seq2: B6Ng01-031E17.b_45_896 (reverse)

seq1  CACCCACAAAGCCAACAGTCCAAATGACAAAATCTCTCAGCTCACTTAAG  50
      ||||||||||  | ||||||||||||||||||||||||||||||||||||
seq2  CACCCACAAAAGCCACAGTCCAAATGACAAAATCTCTCAGCTCACTTAAG  50

seq1  GTGATAAGGACAGACAGTGTAACTTTAAAAGGAACTCAAAGAGGTATATT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGATAAGGACAGACAGTGTAACTTTAAAAGGAACTCAAAGAGGTATATT  100

seq1  AGAAAGTACCCACATGAGGAAATGGACATGTGGTCTAAATACTCTCTTCA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAAGTACCCACATGAGGAAATGGACATGTGGTCTAAATACTCTCTTCA  150

seq1  AAATACATTCTTAGTCTGTAGCGTTTTCCCCTCTTTGTGTCCTTTTTTTA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATACATTCTTAGTCTGTAGCGTTTTCCCCTCTTTGTGTCCTTTTTTTA  200

seq1  GAAACAAACAAAGTGAAGTCAAAAAGAAACTTCTGAGACTTTCACTTGGG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAACAAACAAAGTGAAGTCAAAAAGAAACTTCTGAGACTTTCACTTGGG  250

seq1  AAGTTAACATTCCAGATTGCTGTCCTTCCCAAGGATGCTGGTAAGTTGAT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTTAACATTCCAGATTGCTGTCCTTCCCAAGGATGCTGGTAAGTTGAT  300

seq1  TTACCGTCTCCTCGCCTGGCTTAAATCAGTGAAGAACATCAAGTACAGAG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTACCGTCTCCTCGCCTGGCTTAAATCAGTGAAGAACATCAAGTACAGAG  350

seq1  TCTAGATATCTTCAAAGACAAATTTACTATTGCAGAAGGTGATGCGACAA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTAGATATCTTCAAAGACAAATTTACTATTGCAGAAGGTGATGCGACAA  400

seq1  GCAGTCAAGGCTCCGATGCCCCCACTGTTAATAAATCCCCTTGAGTCCCT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAGTCAAGGCTCCGATGCCCCCACTGTTAATAAATCCCCTTGAGTCCCT  450

seq1  GAAACTTTCACAGACAGATCAGACAAATAGCAATTCCTCAGTCCTCAAGA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAACTTTCACAGACAGATCAGACAAATAGCAATTCCTCAGTCCTCAAGA  500

seq1  TTTAATGCTGTGAGGTCCTAACCCAGACTTAACATCATGATAGCCCTTCT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTAATGCTGTGAGGTCCTAACCCAGACTTAACATCATGATAGCCCTTCT  550

seq1  TTGTATTTGGCAGACATTTCTGCCTCCTTTGCTCTTGAAGCACCCTGAGA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTATTTGGCAGACATTTCTGCCTCCTTTGCTCTTGAAGCACCCTGAGA  600

seq1  ACACACCCCCACCATCTCTCAGTGCTTTCATGTCCACAGTGGGCCCTGGT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACACCCCCACCATCTCTCAGTGCTTTCATGTCCACAGTGGGCCCTGGT  650

seq1  GACAGCAAGCCTTTGACATAAATACAGCCAGAATTTCTACAAACTTAGCA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACAGCAAGCCTTTGACATAAATACAGCCAGAATTTCTACAAACTTAGCA  700

seq1  TTTTGAAGAGAAATTGCATCACTACCTTTAAAACAAAATTTGAGAATTGC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTGAAGAGAAATTGCATCACTACCTTTAAAACAAAATTTGAGAATTGC  750

seq1  AAATTATTTCCTATGATTCCAACCTGAAAAATGATGGCATAAAATGATTC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATTATTTCCTATGATTCCAACCTGAAAAATGATGGCATAAAATGATTC  800

seq1  CATTCAAATAACAGCAAATACAGTTTTATAGAAAGATCATTAAAGAGAAT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTCAAATAACAGCAAATACAGTTTTATAGAAAGATCATTAAAGAGAAT  850

seq1  TC  852
      ||
seq2  TC  852

seq1: chr17_83162280_83162811
seq2: B6Ng01-031E17.g_66_597

seq1  GAATTCCTAAGTCCCTCTGTGTCTGAGTTCATAGGAAAGAAGCACAGAAA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCTAAGTCCCTCTGTGTCTGAGTTCATAGGAAAGAAGCACAGAAA  50

seq1  TCTGCCTTACGGCATTCTACTGTACTCAGAGATCAGCGCCTTGCTCAGAC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGCCTTACGGCATTCTACTGTACTCAGAGATCAGCGCCTTGCTCAGAC  100

seq1  ATCTTCAGCGAATATTCCCCCTGCATCAGATAAGAATAAATACACATATG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTTCAGCGAATATTCCCCCTGCATCAGATAAGAATAAATACACATATG  150

seq1  TATAGCCTGACATTATGCAGAAAGTGAGAAACTGTGGGATATTCAACCCC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATAGCCTGACATTATGCAGAAAGTGAGAAACTGTGGGATATTCAACCCC  200

seq1  AAACAGGATGTCTCCATCAAATACCTCCTGTCAGAGTTCAAGGAAAGAAG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACAGGATGTCTCCATCAAATACCTCCTGTCAGAGTTCAAGGAAAGAAG  250

seq1  AGATGGAGAACTCCAAGAAAATAGGGCCCTCTAAATGGACAGGATGGATG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATGGAGAACTCCAAGAAAATAGGGCCCTCTAAATGGACAGGATGGATG  300

seq1  CACGTACGAAATCACAGAGCCTGAGGCAGCATGTCCATGGCCTTCACAGG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACGTACGAAATCACAGAGCCTGAGGCAGCATGTCCATGGCCTTCACAGG  350

seq1  TCCACCCAAGATGGGAAATTAAGAGCTGAAAGGAGAAGGGAATACATGCC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCACCCAAGATGGGAAATTAAGAGCTGAAAGGAGAAGGGAATACATGCC  400

seq1  TCCATCCTTAACACAAAGCTATCGCCCAGTGATAGGCATGCAAACAAAAA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCATCCTTAACACAAAGCTATCGCCCAGTGATAGGCATGCAAACAAAAA  450

seq1  TTTACTTTTCTCCAAGACAGTCTCACTGGGAAAACAAGCTACTCTTAAGG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTACTTTTCTCCAAGACAGTCTCACTGGGAAAACAAGCTACTCTTAAGG  500

seq1  ATCGGCTGAATTCCCAGCTGTAGATACCCAAG  532
      ||||||||||||||||||||||||||||||||
seq2  ATCGGCTGAATTCCCAGCTGTAGATACCCAAG  532