BAC Information

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BAC

Clone NameB6Ng01-031O21
Chromosome17 (Build37)
Map Location 73,854,027 - 73,988,526
singlet/doubletdoublet
Overlap geneGalnt14
Upstream geneAlk, Ypel5, Lbh, Lycat, LOC668709, Capn13, LOC100043666
Downstream geneEhd3, LOC240160, Xdh, Srd5a2, Memo1, EG668716, 2810410M20Rik, LOC668773, LOC668775, Spast, Slc30a6, Nlrc4, LOC100043883, LOC624159, Yipf4, Birc6
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-031O21.bB6Ng01-031O21.g
ACCDH861409DH861410
length431971
definitionDH861409|Mus musculus domesticus DNA, BAC clone: B6Ng01-031O21, 5' end.DH861410|Mus musculus domesticus DNA, BAC clone: B6Ng01-031O21, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(73,988,090 - 73,988,526)(73,854,027 - 73,854,996)
sequence
tcattgcaagggtaggggaagggaaacctggcattgccttggtagtcttc
aggttgctagaatagtctcataaatccaatggcttagaaatagcaggggt
attatcatagttctaaaggctgggaagtccaagttcaaggccattggtat
ctagaaagagcacacttctggattatatactgcatcttcttgctatgtcc
caacttggtggaaggggcaagggctccaatagagggcatctattaaatga
gtactgattcattcacgaggactctgtccctgtggtctaatgaccttcaa
aagcctcccacctccaatatcaccttgggggggggtaggattactacatg
ttaattttgagggataataccatgtagatcacagtaggcattattgattg
atgatatattgcgtttcagagagcatttatt
gaattccaggtatttggcaactaagtgggagaaaagccaggtaagatggg
tcctttggctccattctggactcctggtgtcatgctgaagtaaggactaa
ggctaatctagacatctcttttctctgtggcatgcactgctatgacccca
ggcagttactttacctgagactttgctccatctcctttgaccttggcaca
gggacttagcctgagaatctcctgttttttctgcttttgagactcaaggc
acttctgccgctgccggatattgcccttctggatggaggagtctgggggg
accctgtgggaaagccatgtggacagatgagaatgcactgcttttgacat
tagtgctgctagctgctggatggattaggggtgtgttttgagagggcaga
gagccatcttccctggagctgtcacaaaggttggcactggtcagaggatg
gaagggaactctcagaagccccatggcagatggatctctagtatggagtc
tatgtcaccaattctattctcttagcacaacccagggtaccacttccaac
agttaaccctagtctcccattctactagcttcaacaaaattcctcttcag
gttttagggataagcaggagtgattgatttgctcagcccacaacagactt
aaaaactctcctccagttggccataggtcttgtctctcccagaccaggct
agcaaagaccgggtctcttcttgtagctagttttgggtccagcagatagg
tgtacctgagttctgggtagacattctctaggtaccacttgaaggtctgg
cagtgaagattcttcctcaagttcagcctgttctcaatgctgggacgatg
agtgggagggtgggacacagagacagaacacagctgttagaggcaggaat
ctacatagtggttccccaccaccagttgacatgtttcataccacactacc
tcctaggggatgctgagtaaa
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr17_73988090_73988526
seq2: B6Ng01-031O21.b_46_482 (reverse)

seq1  AATAAATGCTCTCTGAAACGCAATATATCATCAATCAATAATGCCTACTG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATAAATGCTCTCTGAAACGCAATATATCATCAATCAATAATGCCTACTG  50

seq1  TGATCTACATGGTATTATCCCTCAAAATTAACATGTAGTAATCCTACCCC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGATCTACATGGTATTATCCCTCAAAATTAACATGTAGTAATCCTACCCC  100

seq1  CCCCCAAGGTGATATTGGAGGTGGGAGGCTTTTGAAGGTCATTAGACCAC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCCCAAGGTGATATTGGAGGTGGGAGGCTTTTGAAGGTCATTAGACCAC  150

seq1  AGGGACAGAGTCCTCGTGAATGAATCAGTACTCATTTAATAGATGCCCTC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGGACAGAGTCCTCGTGAATGAATCAGTACTCATTTAATAGATGCCCTC  200

seq1  TATTGGAGCCCTTGCCCCTTCCACCAAGTTGGGACATAGCAAGAAGATGC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTGGAGCCCTTGCCCCTTCCACCAAGTTGGGACATAGCAAGAAGATGC  250

seq1  AGTATATAATCCAGAAGTGTGCTCTTTCTAGATACCAATGGCCTTGAACT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTATATAATCCAGAAGTGTGCTCTTTCTAGATACCAATGGCCTTGAACT  300

seq1  TGGACTTCCCAGCCTTTAGAACTATGATAATACCCCTGCTATTTCTAAGC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGACTTCCCAGCCTTTAGAACTATGATAATACCCCTGCTATTTCTAAGC  350

seq1  CATTGGATTTATGAGACTATTCTAGCAACCTGAAGACTACCAAGGCAATG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTGGATTTATGAGACTATTCTAGCAACCTGAAGACTACCAAGGCAATG  400

seq1  CCAGGTTTCCCTTCCCCTACCCTTGCAATGAGAATTC  437
      |||||||||||||||||||||||||||||||||||||
seq2  CCAGGTTTCCCTTCCCCTACCCTTGCAATGAGAATTC  437

seq1: chr17_73854027_73854996
seq2: B6Ng01-031O21.g_66_1036

seq1  GAATTCCAGGTATTTGGCAACTAAGTGGGAGAAAAGCCAGGTAAGATGGG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCAGGTATTTGGCAACTAAGTGGGAGAAAAGCCAGGTAAGATGGG  50

seq1  TCCTTTGGCTCCATTCTGGACTCCTGGTGTCATGCTGAAGTAAGGACTAA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTTTGGCTCCATTCTGGACTCCTGGTGTCATGCTGAAGTAAGGACTAA  100

seq1  GGCTAATCTAGACATCTCTTTTCTCTGTGGCATGCACTGCTATGACCCCA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCTAATCTAGACATCTCTTTTCTCTGTGGCATGCACTGCTATGACCCCA  150

seq1  GGCAGTTACTTTACCTGAGACTTTGCTCCATCTCCTTTGACCTTGGCACA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCAGTTACTTTACCTGAGACTTTGCTCCATCTCCTTTGACCTTGGCACA  200

seq1  GGGACTTAGCCTGAGAATCTCCTGTTTTTTCTGCTTTTGAGACTCAAGGC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGACTTAGCCTGAGAATCTCCTGTTTTTTCTGCTTTTGAGACTCAAGGC  250

seq1  ACTTCTGCCGCTGCCGGATATTGCCCTTCTGGATGGAGGAGTCTGGGGGG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTCTGCCGCTGCCGGATATTGCCCTTCTGGATGGAGGAGTCTGGGGGG  300

seq1  ACCCTGTGGGAAAGCCATGTGGACAGATGAGAATGCACTGCTTTTGACAT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCCTGTGGGAAAGCCATGTGGACAGATGAGAATGCACTGCTTTTGACAT  350

seq1  TAGTGCTGCTAGCTGCTGGATGGATTAGGGGTGTGTTTTGAGAGGGCAGA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGTGCTGCTAGCTGCTGGATGGATTAGGGGTGTGTTTTGAGAGGGCAGA  400

seq1  GAGCCATCTTCCCTGGAGCTGTCACAAAGGTTGGCACTGGTCAGAGGATG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGCCATCTTCCCTGGAGCTGTCACAAAGGTTGGCACTGGTCAGAGGATG  450

seq1  GAAGGGAACTCTCAGAAGCCCCATGGCAGATGGATCTCTAGTATGGAGTC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGGGAACTCTCAGAAGCCCCATGGCAGATGGATCTCTAGTATGGAGTC  500

seq1  TATGTCACCAATTCTATTCTCTTAGCACAACCCAGGGTACCACTTCCAAC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATGTCACCAATTCTATTCTCTTAGCACAACCCAGGGTACCACTTCCAAC  550

seq1  AGTTAACCCTAGTCTCCCATTCTACTAGCTTCAACAAAATTCCTCTTCAG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTAACCCTAGTCTCCCATTCTACTAGCTTCAACAAAATTCCTCTTCAG  600

seq1  GTTTTAGGGATAAGCAGGAGTGATTGATTTGCTCAGCCCACAACAGACTT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTTAGGGATAAGCAGGAGTGATTGATTTGCTCAGCCCACAACAGACTT  650

seq1  AAAAACTCTCCTCCAGTTGGCCATAGGTCTTGTCTCTCCCAGACCAGGCT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAACTCTCCTCCAGTTGGCCATAGGTCTTGTCTCTCCCAGACCAGGCT  700

seq1  AGCAAAGACCGGGTCTCTTCTTGTAGCTAGTTTTGGGTCCAGCAGATAGG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCAAAGACCGGGTCTCTTCTTGTAGCTAGTTTTGGGTCCAGCAGATAGG  750

seq1  TGTACCTGAGTTCTGGGTAGACATTCTCTAGGTACCACTTGAAGGTCTGG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTACCTGAGTTCTGGGTAGACATTCTCTAGGTACCACTTGAAGGTCTGG  800

seq1  CAGTGAAGATTCTTCCTCAGGTTCAGCCTGTTCTCAATGCTGGGACGATG  850
      ||||||||||||||||||| ||||||||||||||||||||||||||||||
seq2  CAGTGAAGATTCTTCCTCAAGTTCAGCCTGTTCTCAATGCTGGGACGATG  850

seq1  AGTTGGAGGGTGGGACACAGAGACAGAACACAGCTGTTAGAGGCAGGAAT  900
      ||| ||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTGGGAGGGTGGGACACAGAGACAGAACACAGCTGTTAGAGGCAGGAAT  900

seq1  CTACAATAGTGGTTCCCCACCACCAG-TGACATGTTTCATACCCACAC-A  948
      |||| ||||||||||||||||||||| |||||||||||||| |||||| |
seq2  CTAC-ATAGTGGTTCCCCACCACCAGTTGACATGTTTCATA-CCACACTA  948

seq1  CCT-CTAGGGGATGCTGAGTAAA  970
      ||| |||||||||||||||||||
seq2  CCTCCTAGGGGATGCTGAGTAAA  971