BAC Information

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BAC

Clone NameB6Ng01-032B06
Chromosome17 (Build37)
Map Location 23,332,104 - 23,333,034
singlet/doubletsinglet
Overlap genenone
Upstream geneEG240038, EG631624, 6330416L07Rik, Zfp758, 1300003B13Rik, EG210876, LOC100042656, EG628185, ENSMUSG00000046088, EG383218, EG433078, LOC100042679, A630033E08Rik, LOC671128, LOC665961, EG434701, LOC665976, LOC100042225, LOC100042234, EG665988, LOC100042248, Zfp40
Downstream geneLOC100042257, LOC100042261, Vmn2r-ps133, EG666002, EG638102, EG619697, EG619775, EG619788, Olfr752-ps1, EG666030, EG381070, Zfp213, Zfp13, Zscan10, LOC666062, Mmp25, LOC665757, BC038613, Thoc6, Hcfc1r1, Tnfrsf12a, Cldn6, Cldn9, EG666080, 1520401A03Rik, Pkmyt1, Paqr4, Kremen2, 9530082P21Rik, Flywch1, 2810417J12Rik, LOC100042865, Srrm2, Tceb2, Prss33, 4931440B09Rik, Prss32, Prss21, Dcpp1, LOC666157, Dcpp2, LOC620233, Dcpp3, Sbp, Sbpl, Tmprss8, Prss22, LOC100042414, LOC383225, Prss27, Kctd5, Pdpk1, Amdhd2, Atp6v0c, Tbc1d24
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-032B06.bB6Ng01-032B06.g
ACCDH861516DH861517
length1,039928
definitionDH861516|Mus musculus domesticus DNA, BAC clone: B6Ng01-032B06, 5' end.DH861517|Mus musculus domesticus DNA, BAC clone: B6Ng01-032B06, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctttgtttagcactgagccccattttttaatggggttattagatt
ttctggagtctaccttcttgagttctttatatatattggatattagtccc
ctatctgatttaggataggtaaagatcctctcccaatattttggtggcct
ttttgtcttattgacagtgtcttttgccttacagaagctttgcaatttta
tgcggtcccatttgtcgattctccatcttacagcacaagccattgctgtt
ctattcaggaatttttcccttgtgcccatatcttctaggctattccccac
tttctctctataagtttcactgtctctggttttatgaggagttcttggtc
cacttagatttgaccctagtacaaggagataggaatggaacaattcacat
tcttctacatgataactgccagtcgtgccagcaccatttgttgaaaatgc
tgtcttttttctactggatggttttagctcccttgtcgacaatcaagtga
ccataggtgtgggttcattcctgggtcttcaattctattccattggttta
cttgtctgtcgctataccagtaccatgcaatttttatcaaaattgctctg
tagtacagatttaggtcaggcatggtgaatccatcagatgttcttttatc
catgagaagagtttttgatatcctatgtttttttgttattccagatgaat
ttgcagattgcccttgctaattcagtgaagaattgagttggaattttgat
ggggattgcattgaatctgtagattgcttttggtaagatagtcattttta
ctatattgatcctgccaatccatgagcatgggagatctttccatcttctg
agatcttctttaatttctttcttcagagacttgaagttcttttttttttt
tttccatttttattagtattaactcatttacatttccaatgctataccaa
agtccccaaatcaccacccccactccccgacaccactccccatttggcct
gaatccctgactgggcatataagttgcagccaaggctct
gaattctttgatgaatcaatctgtttcttggtgttccactcccccccccc
cagagggtgtacatttactactgcttcactgttgatgttgcttaaatatc
cacttatttatttatctcatgttggtataattttggtatgtgatttgagc
caggatatctgtttatttcctttagagtttccaatgtagttgccttgagg
cctttaatgtcattaggcacaatatatgcttgtacagtcatgtcttctta
ttagattgtgcagttactttgggtacttctccagtcatgttagcaaatat
tccactataaatagctttggagactaggcagacaaatcttctttaagatt
ccttttcacctcagttagaatgaacctcatttggatacataacaaattct
gacaagaatgttaggaaagggacgctattatacactgcttctgggaacag
aaactagagcagccacttaggaaaacaatctagatatttctttaaaatct
agaactaaaactagcatatatactacagtgtttagccatttacccacaga
ttatctcctgatagttacctgcaattctctgagtacacccatgccccatc
tacataggctaaggaaaatagaattcgctattacctgtttctttagatat
tctagctaaaaataaataaataaataaaattgtcataattatcatgagga
ccagttttctctggtgtgttctggggttcaagctgtgctggtatgattgt
gacacattaagaggcatcccaattctgcaggaggtgggagcttacacaca
cagatgcagaactagggttttgtctttaaagcacagggttctgagcatgt
tcatttttcaaatgacaggactatttgtttctcattttcataatttgctg
tttctcttgggaatgcagagagaaagaa
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr17_23332104_23333034
seq2: B6Ng01-032B06.g_68_995

seq1  GAATTCTTTGATGAATCAATCTGTTTCTTGGTGTTCCACTCCCCCCCCCC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTTGATGAATCAATCTGTTTCTTGGTGTTCCACTCCCCCCCCCC  50

seq1  CAGAGGGTGTACATTTACTACTGCTTCACTGTTGATGTTGCTTAAATATC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGAGGGTGTACATTTACTACTGCTTCACTGTTGATGTTGCTTAAATATC  100

seq1  CACTTATTTATTTATCTCATGTTGGTATAATTTTGGTATGTGATTTGAGC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACTTATTTATTTATCTCATGTTGGTATAATTTTGGTATGTGATTTGAGC  150

seq1  CAGGATATCTGTTTATTTCCTTTAGAGTTTCCAATGTAGTTGCCTTGAGG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGATATCTGTTTATTTCCTTTAGAGTTTCCAATGTAGTTGCCTTGAGG  200

seq1  CCTTTAATGTCATTAGGCACAATATATGCTTGTACAGTCATGTCTTCTTA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTTAATGTCATTAGGCACAATATATGCTTGTACAGTCATGTCTTCTTA  250

seq1  TTAGATTGTGCAGTTACTTTGGGTACTTCTCCAGTCATGTTAGCAAATAT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAGATTGTGCAGTTACTTTGGGTACTTCTCCAGTCATGTTAGCAAATAT  300

seq1  TCCACTATAAATAGCTTTGGAGACTAGGCAGACAAATCTTCTTTAAGATT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCACTATAAATAGCTTTGGAGACTAGGCAGACAAATCTTCTTTAAGATT  350

seq1  CCTTTTCACCTCAGTTAGAATGAACCTCATTTGGATACATAACAAATTCT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTTTCACCTCAGTTAGAATGAACCTCATTTGGATACATAACAAATTCT  400

seq1  GACAAGAATGTTAGGAAAGGGACGCTATTATACACTGCTTCTGGGAACAG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACAAGAATGTTAGGAAAGGGACGCTATTATACACTGCTTCTGGGAACAG  450

seq1  AAACTAGAGCAGCCACTTAGGAAAACAATCTAGATATTTCTTTAAAATCT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACTAGAGCAGCCACTTAGGAAAACAATCTAGATATTTCTTTAAAATCT  500

seq1  AGAACTAAAACTAGCATATATACTACAGTGTTTAGCCATTTACCCACAGA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAACTAAAACTAGCATATATACTACAGTGTTTAGCCATTTACCCACAGA  550

seq1  TTATCTCCTGATAGTTACCTGCAATTCTCTGAGTACACCCATGCCCCATC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATCTCCTGATAGTTACCTGCAATTCTCTGAGTACACCCATGCCCCATC  600

seq1  TACATAGGCTAAGGAAAATAGAATTCGCTATTACCTGTTTCTTTAGATAT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACATAGGCTAAGGAAAATAGAATTCGCTATTACCTGTTTCTTTAGATAT  650

seq1  TCTAGCTAAAAATAAATAAATAAATAAAATTGTCATAATTATCATGAGGA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTAGCTAAAAATAAATAAATAAATAAAATTGTCATAATTATCATGAGGA  700

seq1  CCAGTTTTCTCTGGTGTGTTCTGGGGTTCAAGCTGTGCTGGTATGATTGT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGTTTTCTCTGGTGTGTTCTGGGGTTCAAGCTGTGCTGGTATGATTGT  750

seq1  GACACATTAAGAGGCATCCCAATTCTGCAAGGAGGTGGGAGCTTACACAC  800
      |||||||||||||||||||||||||||| |||||||||||||||||||||
seq2  GACACATTAAGAGGCATCCCAATTCTGC-AGGAGGTGGGAGCTTACACAC  799

seq1  ACAGATGCAGAACTAGGGTTTTGTCTTTAAAGCACAGGGTTCTGAGCATG  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGATGCAGAACTAGGGTTTTGTCTTTAAAGCACAGGGTTCTGAGCATG  849

seq1  TTCATTTTTCAAATGACAGGACTATTTGTTTCTCATTTTCATAAGTTTGC  900
      |||||||||||||||||||||||||||||||||||||||||||| |||||
seq2  TTCATTTTTCAAATGACAGGACTATTTGTTTCTCATTTTCATAA-TTTGC  898

seq1  TGTTTCTCTTGGGAATGCAAGAGAGAAAGAA  931
      |||||||||||||||||| ||||||||||||
seq2  TGTTTCTCTTGGGAATGC-AGAGAGAAAGAA  928