BAC Information

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BAC

Clone NameB6Ng01-032I02
Chromosome17 (Build37)
Map Location 56,703,386 - 56,875,596
singlet/doubletdoublet
Overlap geneSafb2, Safb, 2410015M20Rik, Rpl36, Lonp1, LOC619718, Tmem146, Ranbp3, Ccpn-ps, AI662250, Ndufa11
Upstream geneLOC383258, Pot1b, Emr4, Zfp119, BC011426, EG433125, BC031441, Ebi3, Ccdc94, Shd, Fsd1, AW049765, Mpnd, Sh3gl1, Chaf1a, Ubxd1, Hdgfrp2, S3-12, 2310076L09Rik, Lrg1, Sema6b, Tnfaip8l1, D17Wsu104e, Dpp9, LOC668573, A230051N06Rik, Fem1a, Ticam1, M6prbp1, Arrdc5, Uhrf1, Jmjd2b, Ptprs, EG668592, Znrf4
Downstream geneFut4-ps1, Nrtn, Dus3l, Gm546, Rfx2, Acsbg2, 1700061G19Rik, Mllt1, Asah3, Clpp, Alkbh7, Pspn, Gtf2f1, Khsrp, Slc25a41, Slc25a23, Crb3, Dennd1c, Tubb4, Tnfsf9, Cd70, Tnfsf14, C3, Gpr108, Trip10, LOC668635, Vav1, Emr1, EG224916
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-032I02.bB6Ng01-032I02.g
ACCDH861824DH861825
length74553
definitionDH861824|Mus musculus domesticus DNA, BAC clone: B6Ng01-032I02, 5' end.DH861825|Mus musculus domesticus DNA, BAC clone: B6Ng01-032I02, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(56,875,523 - 56,875,596)(56,703,386 - 56,703,943)
sequence
tcttctgggctccactcccggaccatgcccctgcccctcactccttggtg
tggggtgtggagtggagttggggg
aacagtagataggagcacagcctccaaacacaccacagcatggaagggtc
tcaaggacacggtgttcattgagatcaagtgtatgtatgcatttcaccat
atatgcttgcaaagccatggtggtggatttgtgggtaaaagccctgggtg
ggtaaggggcaggctgctggtggtatgtgctttccaaaatgaaagcagta
taatccaggctggaattaggaactgacagcagacagtatgtaacagggaa
gcaggaaagtgcttgggaggctaaggcaggaggactgtgtggaaccccag
cctgtgttccacctcaaaccacctaaccacgagtgctcctactgcctgtc
aatgcattgacgggctcctactgcagtggagattcacaccctgttgccat
gcacagaacagggacaaggttcacacctgccatcatagtctctatggtgc
agccaaggatagcaggagctttcattgttccctctgagaacaccccagaa
acccatctcaggttcctcctatatagaatactttacctggggggaggggg
tag
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr17_56875523_56875596
seq2: B6Ng01-032I02.b_52_125 (reverse)

seq1  CCCCCAACTCCACTCCACACCCCACACCAAGGAGTGAGGGGCAGGGGCAT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCCCAACTCCACTCCACACCCCACACCAAGGAGTGAGGGGCAGGGGCAT  50

seq1  GGTCCGGGAGTGGAGCCCAGAAGA  74
      ||||||||||||||||||||||||
seq2  GGTCCGGGAGTGGAGCCCAGAAGA  74

seq1: chr17_56703386_56703943
seq2: B6Ng01-032I02.g_67_625

seq1  GAATTCAACAGTAGATAGGAGCACAGCCTCCAAACACACCACAGCATGGA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAACAGTAGATAGGAGCACAGCCTCCAAACACACCACAGCATGGA  50

seq1  AGGGTCTCAAGGACACGGTGTTCATTGAGATCAAGTGTATGTATGCATTT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGGTCTCAAGGACACGGTGTTCATTGAGATCAAGTGTATGTATGCATTT  100

seq1  CACCATATATGCTTGCAAAGCCATGGTGGTGGATTTGTGGGTAAAAGCCC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACCATATATGCTTGCAAAGCCATGGTGGTGGATTTGTGGGTAAAAGCCC  150

seq1  TGGGTGGGTAAGGGGCAGGCTGCTGGTGGTATGTGCTTTCCAAAATGAAA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGGTGGGTAAGGGGCAGGCTGCTGGTGGTATGTGCTTTCCAAAATGAAA  200

seq1  GCAGTATAATCCAGGCTGGAATTAGGAACTGACAGCAGACAGTATGTAAC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAGTATAATCCAGGCTGGAATTAGGAACTGACAGCAGACAGTATGTAAC  250

seq1  AGGGAAGCAGGAAAGTGCTTGGGAGGCTAAGGCAGGAGGACTGTGTGGAA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGGAAGCAGGAAAGTGCTTGGGAGGCTAAGGCAGGAGGACTGTGTGGAA  300

seq1  CCCCAGCCTGTGTTCCACCTCAAACCACCTAACCACGAGTGCTCCTACTG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCCAGCCTGTGTTCCACCTCAAACCACCTAACCACGAGTGCTCCTACTG  350

seq1  CCTGTCAATGCATTGACGGGCTCCTACTGCAGTGGAGATTCACACCCTGT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGTCAATGCATTGACGGGCTCCTACTGCAGTGGAGATTCACACCCTGT  400

seq1  TGCCATGCACAGAACAGGGACAAGGTTCACACCTGCCATCATAGTCTCTA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCCATGCACAGAACAGGGACAAGGTTCACACCTGCCATCATAGTCTCTA  450

seq1  TGGTGCAGCCAAGGATAGCAGGAGCTTTCATTGTTCCCTCTGAGAACACC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGTGCAGCCAAGGATAGCAGGAGCTTTCATTGTTCCCTCTGAGAACACC  500

seq1  CCAGAAACCCATCTCAGGTTCCTCCTATATAGAATAC-TTACCTGGGGGG  549
      ||||||||||||||||||||||||||||||||||||| ||||||||||||
seq2  CCAGAAACCCATCTCAGGTTCCTCCTATATAGAATACTTTACCTGGGGGG  550

seq1  AGGGGGTAG  558
      |||||||||
seq2  AGGGGGTAG  559