BAC Information

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BAC

Clone NameB6Ng01-032J03
Chromosome1 (Build37)17 (Build37)
Map Location 144,275,636 - 144,276,14468,316,607 - 68,317,143
singlet/doubletsingletsinglet
Overlap genenone
Upstream geneLOC639376
Downstream geneLOC545369
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-032J03.bB6Ng01-032J03.g
ACCDH861866DH861867
length511531
definitionDH861866|Mus musculus domesticus DNA, BAC clone: B6Ng01-032J03, 5' end.DH861867|Mus musculus domesticus DNA, BAC clone: B6Ng01-032J03, 3' end.
singlet/doubletsingletsinglet
BLAST hituniqueunique
Map location.(144,275,636 - 144,276,144)(68,316,607 - 68,317,143)
sequence
ctgatctttccaagactttaatcatgaatgggtgttggattttgtcaaaa
gctttctcaccttctaatgagatgatcatgtggtttttgtctttgaattt
gtttatatagtggattacattgatggatttccatatattgagccatccct
gcatccttgggatgacgcctacttgatcataatggattattgttttgacg
tgttcttggattctgtttaagagaattttattgagtatttttgcatcaat
attcacaaggaaaattggtctgaagttcattttctttgttgggtctttgt
gtgatttagatatcagagtaactgtgacttcatagaacaaattggctgga
gtaccttttgtttctattttgtggaatagtttgaggagagttggaattag
gtcttctttgaaggtctgatagaactctgcactaaacccatctggtcctg
ggccttttttggttgggagactattaatgactgcttctatttctttaggg
gatataggact
aaagatacaagtacagaagggttggggttgctctcacacaggcctctttc
cgtgcttggcaagctgccattttcttgtgtctccatacggccttccttca
gtccatgaatctgttctactgtctcttgagaacattggacctctgtagtt
cttcaaaggcccctgtctatatatatatatatatatatatatataaaaga
catacgtatatatatatatatatatatatatacacacacacatacacata
tatacgtatatatatgtgtatatatatacatacacatatatacttatata
tacgtatatatatatatatatatatatagccagtctgatgcaggtactgg
ggatcacagcctcaacctatcaatgctttgaggattctgtacatccggcc
acacagggaaggcagggaaagccacagggaagagggctgtgtccgatgct
actggaagatgggtagatcatgggaggggaggaaacgacttctattctgg
actgggtggctgcaagattgcagctgaacat
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr1_144275636_144276144
seq2: B6Ng01-032J03.b_43_559 (reverse)

seq1  AGTCCTATATCCCCTAAAGAAATAGAAGCAGTCATTAATAGTCCCTCAAC  50
      ||||||||||||||||||||||||||||||||||||||||||| | ||||
seq2  AGTCCTATATCCCCTAAAGAAATAGAAGCAGTCATTAATAGTCTCCCAAC  50

seq1  CAAAAAAAGCCCAAGACCAGATGGGTTTAGTGCAGAGATCTATCAGAACT  100
      ||||||| ||||| ||||||||||||||||||||||| ||||||||| ||
seq2  CAAAAAAGGCCCAGGACCAGATGGGTTTAGTGCAGAGTTCTATCAGACCT  100

seq1  TCAAAGAAGATCTAATTCCAGTTCTTCACAAACTATTCCACAAAATAGAA  150
      |||||||||| |||||||||  ||| | ||||||||||||||||||||||
seq2  TCAAAGAAGACCTAATTCCAACTCTCCTCAAACTATTCCACAAAATAGAA  150

seq1  GCAAAAGGTACTCTACCCAACTCATTCTACAAAGCCACAATTAGTCTGAT  200
       |||||||||||| | |||| |  |||||  ||| |||| ||| ||||||
seq2  ACAAAAGGTACTCCAGCCAATTTGTTCTATGAAGTCACAGTTACTCTGAT  200

seq1  ACCTAAACCACAGAAAGACCAAACGAAGATAGAGAATTTCAGACCAATTT  250
      | ||||| |||| ||||||| ||| |||| |  ||| |||||||||||||
seq2  ATCTAAATCACACAAAGACCCAACAAAGAAAATGAACTTCAGACCAATTT  250

seq1  CCCTTATGAATATTGATACAAAAATTCTC----AAATTCTC-----GCTA  291
       |||| ||||||||||| ||||||| |||    ||||||||        |
seq2  TCCTTGTGAATATTGATGCAAAAATACTCAATAAAATTCTCTTAAACAGA  300

seq1  ATCAAAGAACACATCAAAACAATCATCCATCCTGACCAAGTAGGTTTCAT  341
      ||| |||||||| |||||||||| ||||||  ||| ||||||||  ||||
seq2  ATCCAAGAACACGTCAAAACAATAATCCATTATGATCAAGTAGGCGTCAT  350

seq1  TCCAGGGATGCAGGGATGGTTTAATATATGGAAATCCATCATTACAATCC  391
       ||| |||||||||||||| | ||||||||||||||||||| |  |||||
seq2  CCCAAGGATGCAGGGATGGCTCAATATATGGAAATCCATCAATGTAATCC  400

seq1  ACCATATAAACAAACTCAAAGACAAAAGACCACATGATCATCTCAATAGA  441
      || ||||||||||| |||||||||||| ||||||||||||||||| ||||
seq2  ACTATATAAACAAATTCAAAGACAAAA-ACCACATGATCATCTCATTAGA  449

seq1  TGCAGAAAAATCATTTGACAAAATCCAACACCCATTCATGATAAAAGTCT  491
       |  || ||| | ||||||||||||||||||||||||||||| |||||||
seq2  AGGTGAGAAAGCTTTTGACAAAATCCAACACCCATTCATGATTAAAGTCT  499

seq1  TGGAAAGATCAGGAATTC  509
      ||||||||||||||||||
seq2  TGGAAAGATCAGGAATTC  517

seq1: chr17_68316607_68317143
seq2: B6Ng01-032J03.g_68_604

seq1  GAATTCAAAGATACAAGTACAGAAGGGTTGGGGTTGCTCTCACACAGGCC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAAAGATACAAGTACAGAAGGGTTGGGGTTGCTCTCACACAGGCC  50

seq1  TCTTTCCGTGCTTGGCAAGCTGCCATTTTCTTGTGTCTCCATACGGCCTT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTTCCGTGCTTGGCAAGCTGCCATTTTCTTGTGTCTCCATACGGCCTT  100

seq1  CCTTCAGTCCATGAATCTGTTCTACTGTCTCTTGAGAACATTGGACCTCT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTCAGTCCATGAATCTGTTCTACTGTCTCTTGAGAACATTGGACCTCT  150

seq1  GTAGTTCTTCAAAGGCCCCTGTCTATATATATATATATATATATATATAT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAGTTCTTCAAAGGCCCCTGTCTATATATATATATATATATATATATAT  200

seq1  AAAAGACATACGTATATATATATATATATATATATATACACACACACATA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAGACATACGTATATATATATATATATATATATATACACACACACATA  250

seq1  CACATATATACGTATATATATGTGTATATATATACATACACATATATACT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACATATATACGTATATATATGTGTATATATATACATACACATATATACT  300

seq1  TATATATACGTATATATATATATATATATATATAGCCAGTCTGATGCAGG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATATATACGTATATATATATATATATATATATAGCCAGTCTGATGCAGG  350

seq1  TACTGGGGATCACAGCCTCAACCTATCAATGCTTTGAGGATTCTGTACAT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACTGGGGATCACAGCCTCAACCTATCAATGCTTTGAGGATTCTGTACAT  400

seq1  CCGGCCACACAGGGAAGGCAGGGAAAGCCACAGGGAAGAGGGCTGTGTCC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCGGCCACACAGGGAAGGCAGGGAAAGCCACAGGGAAGAGGGCTGTGTCC  450

seq1  GATGCTACTGGAAGATGGGTAGATCATGGGAGGGGAGGAAACGACATCAA  500
      ||||||||||||||||||||||||||||||||||||||||||||| || |
seq2  GATGCTACTGGAAGATGGGTAGATCATGGGAGGGGAGGAAACGACTTCTA  500

seq1  AACTGGACTGGGTGGCTGCAAGATGGCAGCTGAACAT  537
        |||||||||||||||||||||| ||||||||||||
seq2  TTCTGGACTGGGTGGCTGCAAGATTGCAGCTGAACAT  537