BAC Information

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BAC

Clone NameB6Ng01-032N09
Chromosome17 (Build37)
Map Location 75,964,495 - 75,965,375
singlet/doubletsinglet
Overlap genenone
Upstream geneBirc6, Ttc27, LOC100043672, Ltbp1, EG621988, Rasgrp3, 2810405J04Rik
Downstream geneLOC668787, LOC100043885, LOC100043886
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-032N09.bB6Ng01-032N09.g
ACCDH862058DH862059
length972878
definitionDH862058|Mus musculus domesticus DNA, BAC clone: B6Ng01-032N09, 5' end.DH862059|Mus musculus domesticus DNA, BAC clone: B6Ng01-032N09, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctttagctctgcaccccattttttaatgtggttatttggttttct
ggagtctaatttcttgggttctttatatattttggggattagccctctat
cagatgtagggttggtaaagctctttttccaacctgttgattgctgtttt
gtcctattgacagtgttctttgccttacagaagcgttttaattttatgag
gtcccatttgtccattgatgatcatagagcctgagccattggtactctat
tcaagaaattttccctgtcccaatgtgttcaaggatcattcctactttct
ctcttattagattcattcggtgtatctggttttgtgtgggggtccttgat
ccacttgaacttgagctttgtacaaggagataagaatggatcgatttgct
ttcttctacatgctaaccgccaattgagccagcactatttgttgaaaatg
ctttcttttttccactgtatgattttggcttctttgtcaaaaaccaagtg
accataggtgtgtgggtttatttctgggtctcaattctataccattgatc
tacctgtctgccactgtaccagtaccatgcagtttttaatcacaattgct
ctgtagtacaacttgaagtaaggggtggtgattcacgcagaagttctttt
attgttgagaattgttttcactatcctggggttttttgttattccagatg
agaataacaaaaacaatattgaaaacagctagtgtaggattgcaaccttg
tacaaccaaatttttatgaaggcactcagtgcttttcaattttcctctta
gcactgctttcattgtgtcccatatgttttggatatgtggtgccttcatt
ttaaattctaaacatcttgaaattcttcaatttttccctgaccaaatatc
ttttgaatagagagtgttcagtttcatgaattatgtggacttctgctgtt
tattgtatggaaaaccagccta
gaattccttcttagcacattaacaacaaacagtcccaataacttggtggc
ttagctgttccaggatcctctgactaaccaatcagactagaaaactctga
aagtcctcaacatctgcttgaattgttttgacttgaatttatggagttgc
attgaagaattaactgttacaaagattccaaaaaatacttcgttgttttt
gttttttgtttgtttgtttgttttgtttgttttttagcttgcaaagagat
aaggaaaacagaatcaggtcttttagatgcaatgcttcattaaagcaaaa
ttatatgctcttgtttggtgagagtgatcatcattgcctgccttctcctt
ggtttctactacattttttttttcctgctgttgctaaacaataaaaagac
gttatctctcccgtgttcgttattcatgactatatcccttaaagcagcac
taaaatgtccaaactagtaaaatgaacgactaatgcttttgaaggatatc
atggctcaacattcaaaatgtatacaccattggccttggcattgttgatt
atttaaaggtaaaggcaagggagaacagcagatgaagattaattctctgc
tgttctgctgtctgcctagcagaggaggcataaatctgcccccctctgct
gtaaccagatgaggagagaggtgtttatcacaggagactggagaaccata
ctcaaatgagtctgtacaaataggtattactgaaataacaactggctggt
tatttcctagtcactgtgctcttaatgtaaattctgtttttgtttgtttt
tgttttgttttggttttttttttggtttttctagacagggtttcctggtt
accctggctgtcctggaactctctttgt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr17_75964495_75965375
seq2: B6Ng01-032N09.g_71_948

seq1  GAATTCCTTCTTAGCACATTAACAACAAACAGTCCCAATAACTTGGTGGC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCTTCTTAGCACATTAACAACAAACAGTCCCAATAACTTGGTGGC  50

seq1  TTAGCTGTTCCAGGATCCTCTGACTAACCAATCAGACTAGAAAACTCTGA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAGCTGTTCCAGGATCCTCTGACTAACCAATCAGACTAGAAAACTCTGA  100

seq1  AAGTCCTCAACATCTGCTTGAATTGTTTTGACTTGAATTTATGGAGTTGC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTCCTCAACATCTGCTTGAATTGTTTTGACTTGAATTTATGGAGTTGC  150

seq1  ATTGAAGAATTAACTGTTACAAAGATTCCAAAAAATACTTCGTTGTTTTT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTGAAGAATTAACTGTTACAAAGATTCCAAAAAATACTTCGTTGTTTTT  200

seq1  GTTTTTTGTTTGTTTGTTTGTTTTGTTTGTTTTTTAGCTTGCAAAGAGAT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTTTTGTTTGTTTGTTTGTTTTGTTTGTTTTTTAGCTTGCAAAGAGAT  250

seq1  AAGGAAAACAGAATCAGGTCTTTTAGATGCAATGCTTCATTAAAGCAAAA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGAAAACAGAATCAGGTCTTTTAGATGCAATGCTTCATTAAAGCAAAA  300

seq1  TTATATGCTCTTGTTTGGTGAGAGTGATCATCATTGCCTGCCTTCTCCTT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATATGCTCTTGTTTGGTGAGAGTGATCATCATTGCCTGCCTTCTCCTT  350

seq1  GGTTTCTACTACATTTTTTTTTTCCTGCTGTTGCTAAACAATAAAAAGAC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTTTCTACTACATTTTTTTTTTCCTGCTGTTGCTAAACAATAAAAAGAC  400

seq1  GTTATCTCTCCCGTGTTCGTTATTCATGACTATATCCCTTAAAGCAGCAC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTATCTCTCCCGTGTTCGTTATTCATGACTATATCCCTTAAAGCAGCAC  450

seq1  TAAAATGTCCAAACTAGTAAAATGAACGACTAATGCTTTTGAAGGATATC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAATGTCCAAACTAGTAAAATGAACGACTAATGCTTTTGAAGGATATC  500

seq1  ATGGCTCAACATTCAAAATGTATACACCATTGGCCTTGGCATTGTTGATT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGGCTCAACATTCAAAATGTATACACCATTGGCCTTGGCATTGTTGATT  550

seq1  ATTTAAAGGTAAAGGCAAGGGAGAACAGCAGATGAAGATTAATTCTCTGC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTAAAGGTAAAGGCAAGGGAGAACAGCAGATGAAGATTAATTCTCTGC  600

seq1  TGTTCTGCTGTCTGCCTAGCAGAGGAGGCATAAATCTGCCCCCCTCTGCT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTCTGCTGTCTGCCTAGCAGAGGAGGCATAAATCTGCCCCCCTCTGCT  650

seq1  GTAACCAGATGAGGAGAGAGGTGTTTATCACAGGAGACTGGAGAACCATA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAACCAGATGAGGAGAGAGGTGTTTATCACAGGAGACTGGAGAACCATA  700

seq1  CTCAAATGAGTCTGTACAAATAGGTATTACTGAAAATAACAACTGGCTGG  750
      |||||||||||||||||||||||||||||||| |||||||||||||||||
seq2  CTCAAATGAGTCTGTACAAATAGGTATTACTG-AAATAACAACTGGCTGG  749

seq1  TTATTTCCTAGTCACTGTGCTCTT-ATGTAAATTCTGTTTTTGTTTTGTT  799
      |||||||||||||||||||||||| |||||||||||||||||| ||||||
seq2  TTATTTCCTAGTCACTGTGCTCTTAATGTAAATTCTGTTTTTG-TTTGTT  798

seq1  TTTGTTTTGTTTTGGTTTTTTTTTTGGTTTTTCGAGACAGGGTTTCTCTG  849
      ||||||||||||||||||||||||||||||||| |||||||||||| |||
seq2  TTTGTTTTGTTTTGGTTTTTTTTTTGGTTTTTCTAGACAGGGTTTC-CTG  847

seq1  TGTAGCCCTGGCTGTCCTGGAACTCACTTTGT  881
       ||  |||||||||||||||||||| ||||||
seq2  -GTTACCCTGGCTGTCCTGGAACTCTCTTTGT  878