BAC Information

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BAC

Clone NameB6Ng01-032P22
Chromosome17 (Build37)
Map Location 67,913,121 - 68,038,341
singlet/doubletdoublet
Overlap geneLrrc30
Upstream gene9130404H23Rik, Ptprm
Downstream geneLama1, Arhgap28, D930040M24Rik
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-032P22.bB6Ng01-032P22.g
ACCDH862169DH862170
length1391,073
definitionDH862169|Mus musculus domesticus DNA, BAC clone: B6Ng01-032P22, 5' end.DH862170|Mus musculus domesticus DNA, BAC clone: B6Ng01-032P22, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(68,038,203 - 68,038,341)(67,913,121 - 67,914,008)
sequence
aagacagatggcagttggggccagaggcccatcttttttgcttgctccca
gaacagcaggtagcaagaagctgcacttgagaattttggaaaacagtgga
aacctccctgcaagaggggaggaggctgggggtgtgggg
gaattctgcttgggattctactcaagcaggaactaagagctaagtgaccc
atgaacatgaaccttcaagatgatgcttgtctgtccacagggcctggccg
catgggccaagggaaagtattggttcgagtcattcagaaacatcagacac
tgacataatcaaacagataatttagttgacatgcaacagtaatgcagaaa
gttactaagcaaaaaagcaataacatctacaacaaaatttgagtagcttt
ggaggaatgtaagatggaggcatggcatattattgtaaatttctaaataa
ccaagtagttgttttattataattattttgaaaagggtgtctgacccaga
ctaatcccaaactccttaaggaaggtaaagagggccttgaacttgtgatt
gtttggttgccatctcctaagtgctagaactataggcaagaactccatac
acaaccagttaatgtgttgtcagggatcaaacacagccttgtgtaggcta
agcaagcatgctgtctatggacctatattctcagctcctacatgtctggt
tttaaacaacaaaaataagagtgcagggcccaaacaggttaaaaaagcag
aaactacaaacttttcttgagagaacacgggcaataagtttactagagaa
aagccttttaattgtaatattttaatgtatctccaagaattccaagcagg
agtatgtcttggacccaaaaagaaaaaagcaagttaattgtctcatgatt
tattataaatataggtatgtgtggtataaaaaggaaggaaaaaatttaca
tttctgatcgttgatagctgcatgctttctgaaagttgtgctttttcaca
tctgtgcttccagaaagacaaacagaaacagggcactgactgggcatgag
tgtgttcataaccgatggatgctgtgagtttattcttcttcccatggcct
tgtgtacatctcccaaagtccatgtgagccatagctcacggctacaggca
aatctgtggtgcttaatggattcattataatcttcacaaaggcatgtatt
ggggtcatcaactaaagcatgca
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr17_68038203_68038341
seq2: B6Ng01-032P22.b_50_188 (reverse)

seq1  CCCCACACCCCCAGCCTCCTCCCCTCTTGCAGGGAGGTTTCCACTGTTTT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCCACACCCCCAGCCTCCTCCCCTCTTGCAGGGAGGTTTCCACTGTTTT  50

seq1  CCAAAATTCTCAAGTGCAGCTTCTTGCTACCTGCTGTTCTGGGAGCAAGC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAAAATTCTCAAGTGCAGCTTCTTGCTACCTGCTGTTCTGGGAGCAAGC  100

seq1  AAAAAAGATGGGCCTCTGGCCCCAACTGCCATCTGTCTT  139
      |||||||||||||||||||||||||||||||||||||||
seq2  AAAAAAGATGGGCCTCTGGCCCCAACTGCCATCTGTCTT  139

seq1: chr17_67913121_67914008
seq2: B6Ng01-032P22.g_261_1141

seq1  TGCAGAAAGTTACTAAGCAAAAAAGCAATAACATCTACAACAAAATTTGA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCAGAAAGTTACTAAGCAAAAAAGCAATAACATCTACAACAAAATTTGA  50

seq1  GTAGCTTTGGAGGAATGTAAGATGGAGGCATGGCATATTATTGTAAATTT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAGCTTTGGAGGAATGTAAGATGGAGGCATGGCATATTATTGTAAATTT  100

seq1  CTAAATAACCAAGTAGTTGTTTTATTATAATTATTTTGAAAAGGGTGTCT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAAATAACCAAGTAGTTGTTTTATTATAATTATTTTGAAAAGGGTGTCT  150

seq1  GACCCAGACTAATCCCAAACTCCTTAAGGAAGGTAAAGAGGGCCTTGAAC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACCCAGACTAATCCCAAACTCCTTAAGGAAGGTAAAGAGGGCCTTGAAC  200

seq1  TTGTGATTGTTTGGTTGCCATCTCCTAAGTGCTAGAACTATAGGCAAGAA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTGATTGTTTGGTTGCCATCTCCTAAGTGCTAGAACTATAGGCAAGAA  250

seq1  CTCCATACACAACCAGTTAATGTGTTGTCAGGGATCAAACACAGCCTTGT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCCATACACAACCAGTTAATGTGTTGTCAGGGATCAAACACAGCCTTGT  300

seq1  GTAGGCTAAGCAAGCATGCTGTCTATGGACCTATATTCTCAGCTCCTACA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAGGCTAAGCAAGCATGCTGTCTATGGACCTATATTCTCAGCTCCTACA  350

seq1  TGTCTGGTTTTAAACAACAAAAATAAGAGTGCAGGGCCCAAACAGGTTAA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTCTGGTTTTAAACAACAAAAATAAGAGTGCAGGGCCCAAACAGGTTAA  400

seq1  AAAAGCAGAAACTACAAACTTTTCTTGAGAGAACACGGGCAATAAGTTTA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAGCAGAAACTACAAACTTTTCTTGAGAGAACACGGGCAATAAGTTTA  450

seq1  CTAGAGAAAAGCCTTTTAATTGTAATATTTTAATGTATCTCCAAGAATTC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAGAGAAAAGCCTTTTAATTGTAATATTTTAATGTATCTCCAAGAATTC  500

seq1  CAAGCAGGAGTATGTCTTGGACCCAAAAAGAAAAAAGCAAGTTAATTGTC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAGCAGGAGTATGTCTTGGACCCAAAAAGAAAAAAGCAAGTTAATTGTC  550

seq1  TCATGATTTATTATAAATATAGGTATGTGTGGTATAAAAAGGAAGGAAAA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATGATTTATTATAAATATAGGTATGTGTGGTATAAAAAGGAAGGAAAA  600

seq1  AATTTACATTTCTGATCGTTGATAGCTGCATGCTTTCTGAAAGTTGTGCT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTTACATTTCTGATCGTTGATAGCTGCATGCTTTCTGAAAGTTGTGCT  650

seq1  TTTTCACATCTGTGCTTCCAGAAAGACAAACAGAAACAGGGCACTGACTG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTCACATCTGTGCTTCCAGAAAGACAAACAGAAACAGGGCACTGACTG  700

seq1  GGCATGAGTGTGTTCATAACCGATGGATGCTGTGAGTTTATTCTTCTTCC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCATGAGTGTGTTCATAACCGATGGATGCTGTGAGTTTATTCTTCTTCC  750

seq1  CATGGCCTTGTGTACATCTCCCCAAAGTCCATGTGAGCCATAGCCCACGG  800
      ||||||||||||||||||| |||||||||||||||||||||||| |||||
seq2  CATGGCCTTGTGTACATCT-CCCAAAGTCCATGTGAGCCATAGCTCACGG  799

seq1  CTACAGGGCAAATCTGTGGTGCTTAATGGATTTCTTTATAATCCTCCACA  850
      ||||| |||||||||||||||||||||||| ||| ||||||| || ||||
seq2  CTACA-GGCAAATCTGTGGTGCTTAATGGA-TTCATTATAAT-CTTCACA  846

seq1  AAAGCATGTATTGGTGTTCATCAAACTAAAAGCATGCA  888
      || ||||||||||| | ||||| |||| ||||||||||
seq2  AAGGCATGTATTGG-GGTCATC-AACT-AAAGCATGCA  881