BAC Information

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BAC

Clone NameB6Ng01-033A01
Chromosome17 (Build37)
Map Location 76,056,846 - 76,101,093
singlet/doubletdoublet
Overlap geneLOC668787
Upstream geneBirc6, Ttc27, LOC100043672, Ltbp1, EG621988, Rasgrp3, 2810405J04Rik
Downstream geneLOC100043885, LOC100043886
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-033A01.bB6Ng01-033A01.g
ACCDH862175DH862176
length556571
definitionDH862175|Mus musculus domesticus DNA, BAC clone: B6Ng01-033A01, 5' end.DH862176|Mus musculus domesticus DNA, BAC clone: B6Ng01-033A01, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(76,056,846 - 76,057,407)(76,100,518 - 76,101,093)
sequence
tttcctgcctaagagatagttctgctaaaatatgaagacagggtggagct
gggacatttttagcaaagaaaatcacaatggaagaatcaggaagtgtagg
gagcaagggataattttaaaaacattaaggacctgagcaaggagagaata
ggatggggtagccttaggatggagagccaagacagatcaagtcagaccta
atcacccaatttaaggaattcagggcattagaaaactaatgaaatccctg
gagtgcttggtgtaggagaatctgtaagtagatttgtttttttataagtt
catttcacctccagtgaacaggacacctgagaggtggccagaataataac
aggggtatgtctaaaaagtagttgcaatccacacatatagagcatgatga
tgggttgaacttctgtgtagcaaaggtgacaggcagaatgacagaaaatc
ttggagacagtgctcagggagttgggaaggctactgcagattggcttgtt
tagcctcggtagatcttggtggaattccctaacaattccgtcccatgtta
ggacct
aggacagaaacacgcatcatatgaaatgacaaatgatgtgaatacttcca
actcagatggactaaatgggtggggtcctacctcagagtagagtggtaga
aagttccaaacacattgaaagaagaacaaattagaagttaaggacgatcc
tactacctgccccctagtaaaactcagatcataaaggtctgcttttattc
atataaagtagaagttcaaacatggcccctatgcagcgtttatactaaat
caaaacaaaaataaataaataaaaattaaaaagtaaataaagaggggtct
atgggtgtggttcaagggttaagagcatttggttttacagaatgcctagg
ttcagtcccagcaccctcacagaggctggcagcagtttatcactccagtt
tcaagcatcagatactcccttctgacctctgtgagcattgagcatgcatg
agcacatgcttatagagacaagaatatgttttatatttcagagtgtcact
gtggagagctgatgcctgagttcataggtatgttttgtactggtttgaac
atgatacagtgtatgtagaaa
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr17_76056846_76057407
seq2: B6Ng01-033A01.b_39_600

seq1  GAATTCTTTCCTGCCTAAGAGATAGTTCTGCTAAAATATGAAGACAGGGT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTTCCTGCCTAAGAGATAGTTCTGCTAAAATATGAAGACAGGGT  50

seq1  GGAGCTGGGACATTTTTAGCAAAGAAAATCACAATGGAAGAATCAGGAAG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAGCTGGGACATTTTTAGCAAAGAAAATCACAATGGAAGAATCAGGAAG  100

seq1  TGTAGGGAGCAAGGGATAATTTTAAAAACATTAAGGACCTGAGCAAGGAG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTAGGGAGCAAGGGATAATTTTAAAAACATTAAGGACCTGAGCAAGGAG  150

seq1  AGAATAGGATGGGGTAGCCTTAGGATGGAGAGCCAAGACAGATCAAGTCA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAATAGGATGGGGTAGCCTTAGGATGGAGAGCCAAGACAGATCAAGTCA  200

seq1  GACCTAATCACCCAATTTAAGGAATTCAGGGCATTAGAAAACTAATGAAA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACCTAATCACCCAATTTAAGGAATTCAGGGCATTAGAAAACTAATGAAA  250

seq1  TCCCTGGAGTGCTTGGTGTAGGAGAATCTGTAAGTAGATTTGTTTTTTTA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCCTGGAGTGCTTGGTGTAGGAGAATCTGTAAGTAGATTTGTTTTTTTA  300

seq1  TAAGTTCATTTCACCTCCAGTGAACAGGACACCTGAGAGGTGGCCAGAAT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAGTTCATTTCACCTCCAGTGAACAGGACACCTGAGAGGTGGCCAGAAT  350

seq1  AATAACAGGGGTATGTCTAAAAAGTAGTTGCAATCCACACATATAGAGCA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATAACAGGGGTATGTCTAAAAAGTAGTTGCAATCCACACATATAGAGCA  400

seq1  TGATGATGGGTTGAACTTCTGTGTAGCAAAGGTGACAGGCAGAATGACAG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGATGATGGGTTGAACTTCTGTGTAGCAAAGGTGACAGGCAGAATGACAG  450

seq1  AAAATCTTGGAGACAGTGCTCAGGGAGTTGGGAAGGCTACTGCAGATTGG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAATCTTGGAGACAGTGCTCAGGGAGTTGGGAAGGCTACTGCAGATTGG  500

seq1  CTTGTTTAGCCTCGGTAGATCTTGGTGGTATTCCCTAACAATTCCGTCCC  550
      |||||||||||||||||||||||||||| |||||||||||||||||||||
seq2  CTTGTTTAGCCTCGGTAGATCTTGGTGGAATTCCCTAACAATTCCGTCCC  550

seq1  ATGTTAGGACCT  562
      ||||||||||||
seq2  ATGTTAGGACCT  562

seq1: chr17_76100518_76101093
seq2: B6Ng01-033A01.g_66_642 (reverse)

seq1  TTTCTACATACACTGTATCATGTTCAAACCAGTAC-AAACATACCTATGA  49
      ||||||||||||||||||||||||||||||||||| ||||||||||||||
seq2  TTTCTACATACACTGTATCATGTTCAAACCAGTACAAAACATACCTATGA  50

seq1  ACTCAGGCATCAGCTCTCCACAGTGACACTCTGAAATATAAAACATATTC  99
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTCAGGCATCAGCTCTCCACAGTGACACTCTGAAATATAAAACATATTC  100

seq1  TTGTCTCTATAAGCATGTGCTCATGCATGCTCAATGCTCACAGAGGTCAG  149
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTCTCTATAAGCATGTGCTCATGCATGCTCAATGCTCACAGAGGTCAG  150

seq1  AAGGGAGTATCTGATGCTTGAAACTGGAGTGATAAACTGCTGCCAGCCTC  199
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGGAGTATCTGATGCTTGAAACTGGAGTGATAAACTGCTGCCAGCCTC  200

seq1  TGTGAGGGTGCTGGGACTGAACCTAGGCATTCTGTAAAACCAAATGCTCT  249
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGAGGGTGCTGGGACTGAACCTAGGCATTCTGTAAAACCAAATGCTCT  250

seq1  TAACCCTTGAACCACACCCATAGACCCCTCTTTATTTACTTTTTAATTTT  299
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAACCCTTGAACCACACCCATAGACCCCTCTTTATTTACTTTTTAATTTT  300

seq1  TATTTATTTATTTTTGTTTTGATTTAGTATAAACGCTGCATAGGGGCCAT  349
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTTATTTATTTTTGTTTTGATTTAGTATAAACGCTGCATAGGGGCCAT  350

seq1  GTTTGAACTTCTACTTTATATGAATAAAAGCAGACCTTTATGATCTGAGT  399
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTGAACTTCTACTTTATATGAATAAAAGCAGACCTTTATGATCTGAGT  400

seq1  TTTACTAGGGGGCAGGTAGTAGGATCGTCCTTAACTTCTAATTTGTTCTT  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTACTAGGGGGCAGGTAGTAGGATCGTCCTTAACTTCTAATTTGTTCTT  450

seq1  CTTTCAATGTGTTTGGAACTTTCTACCACTCTACTCTGAGGTAGGACCCC  499
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTCAATGTGTTTGGAACTTTCTACCACTCTACTCTGAGGTAGGACCCC  500

seq1  ACCCATTTAGTCCATCTGAGTTGGAAGTATTCACATCATTTGTCATTTCA  549
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCCATTTAGTCCATCTGAGTTGGAAGTATTCACATCATTTGTCATTTCA  550

seq1  TATGATGCGTGTTTCTGTCCTGAATTC  576
      |||||||||||||||||||||||||||
seq2  TATGATGCGTGTTTCTGTCCTGAATTC  577