BAC Information

Click to search

BAC

Clone NameB6Ng01-034J19
Chromosome10 (Build37)17 (Build37)
Map Location 104,053,903 - 104,054,33336,310,641 - 36,311,256
singlet/doubletsingletsinglet
Overlap genenone
Upstream geneEG627488, EG667692, EG667695, LOC100043292
Downstream geneLOC100042383, Tmtc2, EG627573
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-034J19.bB6Ng01-034J19.g
ACCDH863312DH863313
length794875
definitionDH863312|Mus musculus domesticus DNA, BAC clone: B6Ng01-034J19, 5' end.DH863313|Mus musculus domesticus DNA, BAC clone: B6Ng01-034J19, 3' end.
singlet/doubletsingletsinglet
BLAST hituniqueunique
Map location.(104,053,903 - 104,054,333)(36,310,641 - 36,311,256)
sequence
gaattctcaactgagaaatacctaagggctgagaagcacttcaaaaaatg
ttcaacattcttaatcattagggaaatgcaaatcaaaacaaccttgaaat
tccacctcacaccagtcagaatggcaagaccaaaaattcaggtgacagca
gatgctggcaaggatgtggagaaagaggaacactcccccaaagctggtgg
gattgcaggcttgtataaccactctggaaatcagtctggtggttcctcag
aaaattggacatagcactaccggaagatccagcaatacctctcctgggca
tatacccagaagatgtttcaactggtaataaggacacatgctccactatg
ttcatagcagtcttatttataatagccagaagctggaaagaacccagatg
tcccttaacagaggaatggatacagaaaatgtggtacatttacacaatgg
agtcctgctcagctattaaaaacaatgaatttatggaatttttaggcaaa
tggatatatctagaggatatcatcttgagtgaggtaacccaatcacaaaa
gaagtcacttgatatccactgataagtggatattagcccagaaacttaga
atacccaagatacaatttggaaaacacaagaaaatcaagaagaagtaaga
ccaactcgtggatacttcattcctccttagaatggcgaacaaaataccca
tggaaagagttacagagaaaagtttgaagctgagatgaaaggatggacca
tacagagactgccaagacggccccacctgggatccatcccaaaa
gaattcactctgtagaccaggctgacctcaaactcagaaatctgcctgcc
tctgcctcccaagtgctggaattaaaggcttgtgccaccactgcccatga
aattaaatatttgaaaagatttatttatttatttatttatttatctattt
atttaatgagtacactgtagctgtcttcagacacaccagaagcaggcacc
tgatcctgttacagatgggtgtgggccaggaaagtaatcaatacaacctc
gattttgtttcaataagcaaagatccaagccaatgtaagctcatgtaatt
ttgtaacaatctccaataattttgtatcaatatgcaaagtggtatataaa
aacatattgaataatttacccctggttcctattatccacatattattcca
atatcccccttttcttgtctatataaaaaataaagatgttaagtgtaaca
cagtaaaactgttttcaataatgaagctatttctgccaagcttcccacaa
tgtccagcttggttgaatttgcagtcagtctcaggactccgtatttttga
gttcagagttctatacaatgttcatgtcagtttccaatgaactcaggaat
ttgaatatcctggagagtttgtaatctgaacctgatcactgggtggtgtt
tgccactttagcagcaatcctgtctatgtagaacatagcagtcaacccaa
agatgtccactgtttgcacaggacctggcagcagaacaggcatggggcag
ttaatcccagtagttagtgttacacaatccaggtgaatttgcagtcagtg
ggactctgtcatccttcttcttggaaacctaaaaggttacttttaggaat
tctaaagaaccaatttttaaaaaat
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr10_104053903_104054333
seq2: B6Ng01-034J19.b_79_518 (reverse)

seq1  TTTAATAG----------CTCCATTGTGTAAATGTACCACATTTTCTGTA  40
      ||||||||          ||||||||||||||||||||||||||||||||
seq2  TTTAATAGCTGAGCAGGACTCCATTGTGTAAATGTACCACATTTTCTGTA  50

seq1  TCTATTCCTCTGTTGAGGGGCATCTGGGTTCTTTCCAGCTCCTGGCTATT  90
      || ||||||||||| |||| |||||||||||||||||||| |||||||||
seq2  TCCATTCCTCTGTTAAGGGACATCTGGGTTCTTTCCAGCTTCTGGCTATT  100

seq1  ATAAATAAGGCTGCTATGAATATAGTGGAGCATGTGTCCTTCTTACCGGT  140
      ||||||||| |||||||||| |||||||||||||||||||| ||||| ||
seq2  ATAAATAAGACTGCTATGAACATAGTGGAGCATGTGTCCTTATTACCAGT  150

seq1  TGGGGCATCTTCTGGATATATGCCCAGAAGAGGTATTGCTGGATCCTCCG  190
      ||   |||||||||| ||||||||||| ||||||||||||||||| ||||
seq2  TGAAACATCTTCTGGGTATATGCCCAGGAGAGGTATTGCTGGATCTTCCG  200

seq1  GTAGTACTATGTCCAATTTTCTGACGAACCGCCAGACGGATTTCCAGAGT  240
      ||||| |||||||||||||||||| ||||| |||||| ||||||||||||
seq2  GTAGTGCTATGTCCAATTTTCTGAGGAACCACCAGACTGATTTCCAGAGT  250

seq1  GGTTGTACAAGCCTGCAATCCCACCAACAATGGAGGAGTGTTCCTCTTTC  290
      |||| ||||||||||||||||||||| |  ||| ||||||||||||||||
seq2  GGTTATACAAGCCTGCAATCCCACCAGCTTTGGGGGAGTGTTCCTCTTTC  300

seq1  TCCACATCCTCGCCAGCATCTGCTGTCACCTGAATTTTTGATCTTAGCCA  340
      |||||||||| ||||||||||||||||||||||||||||| |||| ||||
seq2  TCCACATCCTTGCCAGCATCTGCTGTCACCTGAATTTTTGGTCTT-GCCA  349

seq1  TTCTGACTGGTGTGAGGTGGAATCTCAGGGTTGTTTTGATTTGCATTTCC  390
      ||||||||||||||||||||||| ||| ||||||||||||||||||||||
seq2  TTCTGACTGGTGTGAGGTGGAATTTCAAGGTTGTTTTGATTTGCATTTCC  399

seq1  CTGATGATTAAGGATGTTGAACATTTTTTCAGGTGCTTCTC  431
      || ||||||||| |||||||||||||||| | |||||||||
seq2  CTAATGATTAAGAATGTTGAACATTTTTTGAAGTGCTTCTC  440

seq1: chr17_36310641_36311256
seq2: B6Ng01-034J19.g_68_683

seq1  GAATTCACTCTGTAGACCAGGCTGACCTCAAACTCAGAAATCTGCCTGCC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCACTCTGTAGACCAGGCTGACCTCAAACTCAGAAATCTGCCTGCC  50

seq1  TCTGCCTCCCAAGTGCTGGAATTAAAGGCTTGTGCCACCACTGCCCATGA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGCCTCCCAAGTGCTGGAATTAAAGGCTTGTGCCACCACTGCCCATGA  100

seq1  AATTAAATATTTGAAAAGATTTATTTATTTATTTATTTATTTATCTATTT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTAAATATTTGAAAAGATTTATTTATTTATTTATTTATTTATCTATTT  150

seq1  ATTTAATGAGTACACTGTAGCTGTCTTCAGACACACCAGAAGCAGGCACC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTAATGAGTACACTGTAGCTGTCTTCAGACACACCAGAAGCAGGCACC  200

seq1  TGATCCTGTTACAGATGGGTGTGGGCCAGGAAAGTAATCAATACAACCTC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGATCCTGTTACAGATGGGTGTGGGCCAGGAAAGTAATCAATACAACCTC  250

seq1  GATTTTGTTTCAATAAGCAAAGATCCAAGCCAATGTAAGCTCATGTAATT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATTTTGTTTCAATAAGCAAAGATCCAAGCCAATGTAAGCTCATGTAATT  300

seq1  TTGTAACAATCTCCAATAATTTTGTATCAATATGCAAAGTGGTATATAAA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTAACAATCTCCAATAATTTTGTATCAATATGCAAAGTGGTATATAAA  350

seq1  AACATATTGAATAATTTACCCCTGGTTCCTATTATCCACATATTATTCCA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACATATTGAATAATTTACCCCTGGTTCCTATTATCCACATATTATTCCA  400

seq1  ATATCCCCCTTTTCTTGTCTATATAAAAAATAAAGATGTTAAGTGTAACA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATCCCCCTTTTCTTGTCTATATAAAAAATAAAGATGTTAAGTGTAACA  450

seq1  CAGTAAAACTGTTTTCAATAATGAAGCTATTTCTGCCAAGCTTCCCACAA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGTAAAACTGTTTTCAATAATGAAGCTATTTCTGCCAAGCTTCCCACAA  500

seq1  TGTCCAGCTTGGTTGAATTTGCAGTCAGTCTCAGGACTCCGTATTTTTGA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTCCAGCTTGGTTGAATTTGCAGTCAGTCTCAGGACTCCGTATTTTTGA  550

seq1  GTTCAGAGTTCTATACAATGTTCATGTCAGTTTCCAATGAACTCAGGAAT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTCAGAGTTCTATACAATGTTCATGTCAGTTTCCAATGAACTCAGGAAT  600

seq1  TTGAATATCCTGGAGA  616
      ||||||||||||||||
seq2  TTGAATATCCTGGAGA  616