BAC Information

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BAC

Clone NameB6Ng01-035C15
Chromosome17 (Build37)10 (Build37)
Map Location 22,485,816 - 22,486,40017,062,139 - 17,062,258
singlet/doubletsingletsinglet
Overlap gene6330416L07Rik
Upstream geneA830058L05Rik, Zfp54, Zfp51, Zfp53, LOC100042508, Zfp52, BC049807, Zfp760, BC043476, 4930515G13Rik, 2610036F08Rik, LOC624960, 3110048L19Rik, 4930432O21Rik, LOC665820, LOC665825, LOC674332, LOC631010, EG665844, EG210853, LOC671007, EG240038, EG631624
Downstream geneZfp758, 1300003B13Rik, EG210876, LOC100042656, EG628185, ENSMUSG00000046088, EG383218, EG433078, LOC100042679, A630033E08Rik, LOC671128, LOC665961, EG434701, LOC665976, LOC100042225, LOC100042234, EG665988, LOC100042248, Zfp40, LOC100042257, LOC100042261, Vmn2r-ps133, EG666002, EG638102
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-035C15.bB6Ng01-035C15.g
ACCDH863709DH863710
length709532
definitionDH863709|Mus musculus domesticus DNA, BAC clone: B6Ng01-035C15, 5' end.DH863710|Mus musculus domesticus DNA, BAC clone: B6Ng01-035C15, 3' end.
singlet/doubletsingletsinglet
BLAST hituniqueunique
Map location.(22,485,816 - 22,486,400)(17,062,139 - 17,062,258)
sequence
gaattccatgctaatctgtgcagtccttagtcactgttagaggaaacttc
aatataagcatctgcatgtccttactattatctttgtacatactacttca
ggttgactgcttttcacctttttcagccctggggcaaataattgtggaca
agtatccatcccaaccagtgtctcttgttgccaaacgtttccatgtgtct
ttgttatctcacttctgtctgattgtcttcagttacctggcactctaaga
aaaggtccttggtgctccatgaaatttgtctcactgttctttaatttagg
tctctatagcaggtaattaggcacaattaagagcaagatatatatagctc
agtagttcttccagttttcaggttctttttccttggaactttatatttat
ccacatgtcatccaaccctctttgaccttctgtaggctctgtgtacatgg
catgcagagacctacatttctgagtcctgtatggccctggaagggatggt
gtgacatggtttcctgtccctagagcaaagccagtagggtatggccctcc
acaagtgctgacaattgctgtaagcgtggggcttgtttgtatattttgtt
tcatgttcctccttcgggaaatgttctttctgtcaaagtttgggggatgt
tctccctaccaagtttagtgactccatgatattagaacagcatgagtcca
gaggtgaga
gaattcaataactcacttaaagaaatacaggagaacactgctaaagagtt
acaagtccttaaagaaaaacaggaaaacactgctaaagagttacaagtcc
ttaaagaaaaacaggaaaacacaaccaaacaggtagaagtcattatagaa
aaacaggaaaacacatccaaacaggtgatggaaatgaacaaaaccatact
agacctaaaaagggaagtagacacaataaagaaaacccaaagtgaggcga
cgctggagatagaaaccctaggaaagaaatctggaaccatagatgccagc
atcagcaacagaatacaagagatggaagagagaatctcaggtgcagaaga
ctccatagagaacatcggcacaacaatcaaagaaaatggaaaatgcaaaa
agatcctaactcaaaacatccaggaaatccaggacacaatgagaagacca
aacctacggataatagggagtggatgagaatgaagattttcaactcaaag
aaccagcaaacatcttcaacaagattattgaa
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr17_22485816_22486400
seq2: B6Ng01-035C15.b_46_630 (reverse)

seq1  CAAGCCCCACGCTTACAGCAATTGTCAGCACTTGTGGAGGGCCATACCCT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAGCCCCACGCTTACAGCAATTGTCAGCACTTGTGGAGGGCCATACCCT  50

seq1  ACTGGCTTTGCTCTAGGGACAGGAAACCATGTCACACCATCCCTTCCAGG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTGGCTTTGCTCTAGGGACAGGAAACCATGTCACACCATCCCTTCCAGG  100

seq1  GCCATACAGGACTCAGAAATGTAGGTCTCTGCATGCCATGTACACAGAGC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCATACAGGACTCAGAAATGTAGGTCTCTGCATGCCATGTACACAGAGC  150

seq1  CTACAGAAGGTCAAAGAGGGTTGGATGACATGTGGATAAATATAAAGTTC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTACAGAAGGTCAAAGAGGGTTGGATGACATGTGGATAAATATAAAGTTC  200

seq1  CAAGGAAAAAGAACCTGAAAACTGGAAGAACTACTGAGCTATATATATCT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAGGAAAAAGAACCTGAAAACTGGAAGAACTACTGAGCTATATATATCT  250

seq1  TGCTCTTAATTGTGCCTAATTACCTGCTATAGAGACCTAAATTAAAGAAC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTCTTAATTGTGCCTAATTACCTGCTATAGAGACCTAAATTAAAGAAC  300

seq1  AGTGAGACAAATTTCATGGAGCACCAAGGACCTTTTCTTAGAGTGCCAGG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTGAGACAAATTTCATGGAGCACCAAGGACCTTTTCTTAGAGTGCCAGG  350

seq1  TAACTGAAGACAATCAGACAGAAGTGAGATAACAAAGACACATGGAAACG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAACTGAAGACAATCAGACAGAAGTGAGATAACAAAGACACATGGAAACG  400

seq1  TTTGGCAACAAGAGACACTGGTTGGGATGGATACTTGTCCACAATTATTT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGGCAACAAGAGACACTGGTTGGGATGGATACTTGTCCACAATTATTT  450

seq1  GCCCCAGGGCTGAAAAAGGTGAAAAGCAGTCAACCTGAAGTAGTATGTAC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCCCAGGGCTGAAAAAGGTGAAAAGCAGTCAACCTGAAGTAGTATGTAC  500

seq1  AAAGATAATAGTAAGGACATGCAGATGCTTATATTGAAGTTTCCTCTAAC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGATAATAGTAAGGACATGCAGATGCTTATATTGAAGTTTCCTCTAAC  550

seq1  AGTGACTAAGGACTGCACAGATTAGCATGGAATTC  585
      |||||||||||||||||||||||||||||||||||
seq2  AGTGACTAAGGACTGCACAGATTAGCATGGAATTC  585

seq1: chr10_17062139_17062258
seq2: B6Ng01-035C15.g_72_200 (reverse)

seq1  TACCTGT---------TTTTCCTGTTTTTCTTTAAGGACTTCTATCTGTT  41
      |||||||         ||||||||||||||||||||||||| || || ||
seq2  TACCTGTTTGGTTGTGTTTTCCTGTTTTTCTTTAAGGACTTGTAACTCTT  50

seq1  TGGTTGTGTTTTCCTGTTTTTCTTTAAGGACTTGTAACTCTTTAGCAGTG  91
      | |  |||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGCAGTGTTTTCCTGTTTTTCTTTAAGGACTTGTAACTCTTTAGCAGTG  100

seq1  TTCTCCTGTATTTCTCTAAGTGAGCTATT  120
      ||||||||||||||| |||||||| ||||
seq2  TTCTCCTGTATTTCTTTAAGTGAGTTATT  129