BAC Information

Click to search

BAC

Clone NameB6Ng01-035L13
Chromosome17 (Build37)
Map Location 76,095,266 - 76,096,312
singlet/doubletsinglet
Overlap genenone
Upstream geneBirc6, Ttc27, LOC100043672, Ltbp1, EG621988, Rasgrp3, 2810405J04Rik, LOC668787
Downstream geneLOC100043885, LOC100043886
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-035L13.bB6Ng01-035L13.g
ACCDH864115DH864116
length1,0321,202
definitionDH864115|Mus musculus domesticus DNA, BAC clone: B6Ng01-035L13, 5' end.DH864116|Mus musculus domesticus DNA, BAC clone: B6Ng01-035L13, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcccccagagacactgttcttgaaccttccagctattaccctgcag
gatctttgtgaaacccagcaaaaccaagcacatgcatgaagcttagagct
cgaaccacacaaaatcataagctgtttctcgttcccagttgggggcaaaa
tacagtcagttaccctgatcactagatctgggagaaaaaaagggaaagct
cccctacctgttttcaattgtctgcatctttcttattgttgcagctttga
gtactaagcaagtttggataatatcatcaataaaagtacatttagcccag
gagagcactaataatatatgtattttaaaagagctacatttcatcagaag
tatgcagtccattacacgaagcacattgcttgactcctctgtgctttcct
gcaggattctgaagtgcctttctgattggggaggggagtcatgattgctt
gcagttttaccaaataaggcttcggggtctcataattattactcagagat
ttgatggacccacatggaggttgttctactccaacacacacgcaggaatt
ccactttaaatcatccataaacataaatacaaaattttgtatttgtacaa
tacaaaaatacctttctgacaaaagaatacaaaagagacaagggttgcta
ggcaaccgcctggcacaggacttagcagcccaggtaataaagagttgtgg
tgctgccatcacctgaaaggtgttgcttaaagcaacaaggagtacaagag
ggaagtggaaatccagcgaagaatcatggccattctccccaaattgcact
gcagaatattctattaattttaacatgttgagttacaaaataagcaaaca
aacctttatttagaattttctgaaagtccaactacaacctgggatttgct
atgccacccctgacagtcttcttgttggtcatggaaaaagcacacacagc
tttgttcgatagggtcgtgtgtaggggaacataccaaatgagctgcctct
ggtagcctcatttgtctcttggggtaccagat
gaattctggggcttgctggccagctactttagctatgctttgagttttag
attcagtgagagacgctgttacagaaaacaaaatggacacgcttcccata
cccctgctgcaagactcaggaatcactgcagaagacacagaaagattgta
agagccagagatttcagaatcttgctgccaaactgcttcatcgacaaggc
agacccattgcacaggaatccacagcatctctgacactacaggtataaaa
cttgcataagatcaagccagttaaaattccaacatggtgggagaagaccc
cacaattctctgcccccagctgatgagctaccagcagttgatagctacta
gaagagaaagaacccattttattcagggatgtgtccccaggaaagttgct
gtgctccagtggatggctacacacccacacccacactgccagcaacaagc
tccacccacccagtgattaaaaagagaagagtatgtgaagcccaaaggca
atgttggaagaagttgacagaagagaactggggttgatttgctcaaaaca
catggaatacatatataaaaatcactgagaaataaataactattttttaa
atgaacttgattttaattaaaagctctctacaaagagaaaaaaaataaag
atggctagcaactgaggaagacacttaatgttgacttttggcctccacct
gaacatgtattcatacacatcttttacacatgaatacacacacacacaca
cacacacatattttaaagagacaggtgagattagaaatccttacataata
gaaattttaatagggtaaacaaagtttaccctccataatctttacaattc
taagctattcccaaaaaagcataattaatttttcttttgattctgcacta
acttaattattctaatttaggctccaataaactatgcagatttcacataa
catgggtgtttcaatatcacaatgtgaatttttttcctatgtttcatgga
taagagaaagcagcatttatttattgtttagtagaactcgactctatagc
atgacatgtgactctgtccaatcatggagtacaacagctacctcgctatg
atgtcttgttgaattcttatgatacaagttatctgtatccacgctgtatt
tgataccagcttagcatagccaagtcccttgctataactggcacgatatg
ca
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr17_76095266_76096312
seq2: B6Ng01-035L13.b_46_1077 (reverse)

seq1  ATCTGGTACACACCAAAGAGACAAAAATGAAGGCTACCAGAGGCAGGCTC  50
      |||||||||   || |||||||  ||||| ||||||||||||||| ||||
seq2  ATCTGGTAC---CCCAAGAGAC--AAATG-AGGCTACCAGAGGCA-GCTC  43

seq1  ATTTTGGTGATGGTTTCCCCTAACAACGACCCTATCTGAACAAAGCTTGT  100
      | |||||| |||  ||||||||   ||||||||||| ||||||||| |||
seq2  A-TTTGGT-ATG--TTCCCCTACACACGACCCTATC-GAACAAAGC-TGT  87

seq1  GTGTGCTTTTTTCATAGACCACAAAGAAGACTGTTCAGGGTGGCATAGCA  150
      ||||||||||| ||| |||||  |||||||||||   |||||||||||||
seq2  GTGTGCTTTTTCCAT-GACCAACAAGAAGACTGTCAGGGGTGGCATAGCA  136

seq1  AATTCCAGG-TGTAGTTTGGACTTTCAGAAAATTCTAAATAAAGGTTTGT  199
      ||| ||||| ||||| ||||||||||||||||||||||||||||||||| 
seq2  AATCCCAGGTTGTAG-TTGGACTTTCAGAAAATTCTAAATAAAGGTTTG-  184

seq1  TTTGCTTATTTTGTAACTCAACATGTTAAAATTAATAGAATATTCTGCAG  249
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGCTTATTTTGTAACTCAACATGTTAAAATTAATAGAATATTCTGCAG  234

seq1  TGCAATTTGGGGAGAATGGCCATGATTCTTCGCTGGATTTCCACTTCCCT  299
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCAATTTGGGGAGAATGGCCATGATTCTTCGCTGGATTTCCACTTCCCT  284

seq1  CTTTGTACTCCTTTGTTGCTTTAAGCAACACCCTTCAGGTGATGGCAGCA  349
      | ||||||||| |||||||||||||||||||| |||||||||||||||||
seq2  C-TTGTACTCC-TTGTTGCTTTAAGCAACACCTTTCAGGTGATGGCAGCA  332

seq1  CCACAACTCTTTATTACCTGGGCTGCTAAGTCCTGTGCCAGGCGGTTGCC  399
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCACAACTCTTTATTACCTGGGCTGCTAAGTCCTGTGCCAGGCGGTTGCC  382

seq1  TAGCAACCCTTGTCTCTTTTGTATTCTTTTGTCAG-AAGGTATTTTTGTA  448
      ||||||||||||||||||||||||||||||||||| ||||||||||||||
seq2  TAGCAACCCTTGTCTCTTTTGTATTCTTTTGTCAGAAAGGTATTTTTGTA  432

seq1  TTGTAC-AATACAAAATTTTGTATTTATGTTTATGGATGATTTAAAGTGG  497
      |||||| |||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTACAAATACAAAATTTTGTATTTATGTTTATGGATGATTTAAAGTGG  482

seq1  AATTCCTGCGTGTGTGTTGGAGTAGAACAACCTCCATGTGGGTCCATCAA  547
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTCCTGCGTGTGTGTTGGAGTAGAACAACCTCCATGTGGGTCCATCAA  532

seq1  ATCTCTGAGTAATAATTATGAGACCCCGAAGCCTTATTTGGTAAAACTGC  597
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTCTGAGTAATAATTATGAGACCCCGAAGCCTTATTTGGTAAAACTGC  582

seq1  AAGCAATCATGACTCCCCTCCCCAATCAGAAAGGCACTTCAGAATCCTGC  647
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGCAATCATGACTCCCCTCCCCAATCAGAAAGGCACTTCAGAATCCTGC  632

seq1  AGGAAAGCACAGAGGAGTCAAGCAATGTGCTTCGTGTAATGGACTGCATA  697
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGAAAGCACAGAGGAGTCAAGCAATGTGCTTCGTGTAATGGACTGCATA  682

seq1  CTTCTGATGAAATGTAGCTCTTTTAAAATACATATATTATTAGTGCTCTC  747
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCTGATGAAATGTAGCTCTTTTAAAATACATATATTATTAGTGCTCTC  732

seq1  CTGGGCTAAATGTACTTTTATTGATGATATTATCCAAACTTGCTTAGTAC  797
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGGCTAAATGTACTTTTATTGATGATATTATCCAAACTTGCTTAGTAC  782

seq1  TCAAAGCTGCAACAATAAGAAAGATGCAGACAATTGAAAACAGGTAGGGG  847
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAAAGCTGCAACAATAAGAAAGATGCAGACAATTGAAAACAGGTAGGGG  832

seq1  AGCTTTCCCTTTTTTTCTCCCAGATCTAGTGATCAGGGTAACTGACTGTA  897
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTTTCCCTTTTTTTCTCCCAGATCTAGTGATCAGGGTAACTGACTGTA  882

seq1  TTTTGCCCCCAACTGGGAACGAGAAACAGCTTATGATTTTGTGTGGTTCG  947
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTGCCCCCAACTGGGAACGAGAAACAGCTTATGATTTTGTGTGGTTCG  932

seq1  AGCTCTAAGCTTCATGCATGTGCTTGGTTTTGCTGGGTTTCACAAAGATC  997
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTCTAAGCTTCATGCATGTGCTTGGTTTTGCTGGGTTTCACAAAGATC  982

seq1  CTGCAGGGTAATAGCTGGAAGGTTCAAGAACAGTGTCTCTGGGGGAATTC  1047
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGCAGGGTAATAGCTGGAAGGTTCAAGAACAGTGTCTCTGGGGGAATTC  1032