BAC Information

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BAC

Clone NameB6Ng01-035L17
Chromosome17 (Build37)
Map Location 76,707,145 - 76,804,816
singlet/doubletdoublet
Overlap genenone
Upstream geneLtbp1, Rasgrp3, 2810405J04Rik, LOC668787, LOC100043885, LOC100043886
Downstream geneEG624348, LOC545234
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-035L17.bB6Ng01-035L17.g
ACCDH864123DH864124
length422934
definitionDH864123|Mus musculus domesticus DNA, BAC clone: B6Ng01-035L17, 5' end.DH864124|Mus musculus domesticus DNA, BAC clone: B6Ng01-035L17, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(76,707,145 - 76,707,567)(76,803,867 - 76,804,816)
sequence
gaattctcacctgaggaatactgaatggctgagaagcacctgaaaaaatg
ttcagcattcttaatcatcagggaaatgcaaatcaaaacaaccctgagat
tccacctcacaccagttagaatggctaagataaaaaattcaggtgacagc
agatgctggcgaggatgtggagaaagaggaacactcctccattgttggtg
ggattgcaagcttgagccttattttctgttctagtacttccttctggaag
acacaaacatcatggctaaacctctttcatagaagcaagataattaatct
attctcaaaggttgtattttacttaacatgcataaaacatctctgcacct
atgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtggtgctgtaaataatgaa
cgcatatatgagtgtgtggtga
gaattcttgagtaagcatggcccaagtgtcagcattcagatctattttca
taattttctaaaatacctaaatactcaaacatattgctacagatctttaa
tatcctctatttacaacaaagtataaagatttttttattcagtaaaaatt
catttactagagttttattttgttgttattattctatcagatttagcata
taaaaacgggcttcatcatgatgttttcagaatatatttcactatactta
gtttttaatttttcctctttccatattcaaaagaaagaactatgcacttg
ctactgtattttgtagtgtatagtgtacttattggtcttcaattatgagt
ttgaagcttatttagaagagttcttataaaattgctaacattaacagtgt
cacagctaaagaacaagaataggttttaatgtagacctagagatttctgc
ttcagagaaatctaaataggcagaaaatttcaaccattccaccagtaaac
tagacaagtgagactgagctgacacatcacaaccaaaaacacttgctgta
atcaaatctctgaaaagtatatgctgagtcagaatcacgggtagccatac
tcagaaacaaactggagttcacaatgaataatcttgcattgtcattaatt
agtgagacaaaagaatgtgccaacccctgtttgaaaaaaaaaaaaaaaca
aaacaaaaacaaaaacaaggattggcagaccacacagatcgacttacagt
ttactgaagcagaaaccatcacgttatatggcatgcattttgcacctctg
gcaaaataactcccttataatataaaaggtgatcaggaaggaaggaggtt
ctagatagctagcatgagttctaacctcctgagctggacaatgacccaag
taagcagaaacctgaggactgcctaggctactga
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr17_76707145_76707567
seq2: B6Ng01-035L17.b_45_466

seq1  GAATTCTCACCTGAGGAATACTGAATGGCTGAGAAGCACCTGAAAAAATG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTCACCTGAGGAATACTGAATGGCTGAGAAGCACCTGAAAAAATG  50

seq1  TTCAGCATTCTTAATCATCAGGGAAATGCAAATCAAAACAACCCTGAGAT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCAGCATTCTTAATCATCAGGGAAATGCAAATCAAAACAACCCTGAGAT  100

seq1  TCCACCTCACACCAGTTAGAATGGCTAAGATAAAAAATTCAGGTGACAGC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCACCTCACACCAGTTAGAATGGCTAAGATAAAAAATTCAGGTGACAGC  150

seq1  AGATGCTGGCGAGGATGTGGAGAAAGAGGAACACTCCTCCATTGTTGGTG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATGCTGGCGAGGATGTGGAGAAAGAGGAACACTCCTCCATTGTTGGTG  200

seq1  GGATTGCAAGCTTGAGCCTTATTTTCTGTTCTAGTACTTCCTTCTGGAAG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGATTGCAAGCTTGAGCCTTATTTTCTGTTCTAGTACTTCCTTCTGGAAG  250

seq1  ACACAAACATCATGGCTAAACCTCTTTCATAGAAGCAAGATAATTAATCT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACAAACATCATGGCTAAACCTCTTTCATAGAAGCAAGATAATTAATCT  300

seq1  ATTCTCAAAGGTTGTATTTTACTTAACATGCATAAAACATCTCTGCACCT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCTCAAAGGTTGTATTTTACTTAACATGCATAAAACATCTCTGCACCT  350

seq1  ATGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGGTGCTGTAGATATATGA  400
      ||||||||||||||||||||||||||||||||||||||||| ||| ||||
seq2  ATGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGGTGCTGTAAATA-ATGA  399

seq1  ATGCATGTATGCGTGTGTGGTGA  423
      | |||| |||| |||||||||||
seq2  ACGCATATATGAGTGTGTGGTGA  422

seq1: chr17_76803867_76804816
seq2: B6Ng01-035L17.g_68_1001 (reverse)

seq1  TCAGTAGCCTATGGCAGGTCCTCAGGTATCTGC-TACTTGGGTCATTGTC  49
      ||||||||||| |||| |||||||||| ||||| ||||||||||||||||
seq2  TCAGTAGCCTA-GGCA-GTCCTCAGGTTTCTGCTTACTTGGGTCATTGTC  48

seq1  CAGCTCAGGAGTTAGGAACTCATGCTAGCTATCTAGAAACCTCCTTCCTT  99
      ||||||||||| |  ||||||||||||||||||||| |||||||||||||
seq2  CAGCTCAGGAGGTTAGAACTCATGCTAGCTATCTAG-AACCTCCTTCCTT  97

seq1  CCTGATCACCCTTTTATATTATAAGTGAGTTATTTTGTCAGAAGTTGCAA  149
      |||||||| |||||||||||||||| ||||||||||| ||| || |||||
seq2  CCTGATCA-CCTTTTATATTATAAGGGAGTTATTTTGCCAG-AGGTGCAA  145

seq1  AATGCATGCCATATAACGTGATGGGTTATCTGCTTTCAGTAAACTGTAAG  199
      ||||||||||||||||||||||||  | ||||| ||||||||||||||||
seq2  AATGCATGCCATATAACGTGATGG--TTTCTGC-TTCAGTAAACTGTAAG  192

seq1  TCGATCTGTGT-GTCTGCCATATCTTTGTTTTTTGTTTTTTTGTTTTTGT  248
      ||||||||||| |||||||| ||| |||         |||||||||||||
seq2  TCGATCTGTGTGGTCTGCCA-ATCCTTG---------TTTTTGTTTTTGT  232

seq1  TTT-TTTTTTTTTTTTTCTATAACAGGGGTTGGCACATTCTTTTGTCTTT  297
      ||| ||||||||||||| |  |||||||||||||||||||||||||| | 
seq2  TTTGTTTTTTTTTTTTTTTCAAACAGGGGTTGGCACATTCTTTTGTC-TC  281

seq1  ACTAATTAATGACAATGCAAGATTATTCATTGTGAACTCCAGTTTGTTTC  347
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTAATTAATGACAATGCAAGATTATTCATTGTGAACTCCAGTTTGTTTC  331

seq1  TGAGTATGGCTACCCCTGATTCTGACTCAGCATATACTTTTCAGAGATTT  397
      ||||||||||||||| ||||||||||||||||||||||||||||||||||
seq2  TGAGTATGGCTACCCGTGATTCTGACTCAGCATATACTTTTCAGAGATTT  381

seq1  GATTACAGCAAGTGTTTTTGGTTGTGATGTGTCAGCTCAGTCTCACTTGT  447
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATTACAGCAAGTGTTTTTGGTTGTGATGTGTCAGCTCAGTCTCACTTGT  431

seq1  CTAGTTTACTGGTGGAATGGTTGAAATTTTCTGCCTATTTAGATTTCTCT  497
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAGTTTACTGGTGGAATGGTTGAAATTTTCTGCCTATTTAGATTTCTCT  481

seq1  GAAGCAGAAATCTCTAGGTCTACATTAAAACCTATTCTTGTTCTTTAGCT  547
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGCAGAAATCTCTAGGTCTACATTAAAACCTATTCTTGTTCTTTAGCT  531

seq1  GTGACACTGTTAATGTTAGCAATTTTATAAGAACTCTTCTAAATAAGCTT  597
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGACACTGTTAATGTTAGCAATTTTATAAGAACTCTTCTAAATAAGCTT  581

seq1  CAAACTCATAATTGAAGACCAATAAGTACACTATACACTACAAAATACAG  647
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAACTCATAATTGAAGACCAATAAGTACACTATACACTACAAAATACAG  631

seq1  TAGCAAGTGCATAGTTCTTTCTTTTGAATATGGAAAGAGGAAAAATTAAA  697
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGCAAGTGCATAGTTCTTTCTTTTGAATATGGAAAGAGGAAAAATTAAA  681

seq1  AACTAAGTATAGTGAAATATATTCTGAAAACATCATGATGAAGCCCGTTT  747
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTAAGTATAGTGAAATATATTCTGAAAACATCATGATGAAGCCCGTTT  731

seq1  TTATATGCTAAATCTGATAGAATAATAACAACAAAATAAAACTCTAGTAA  797
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATATGCTAAATCTGATAGAATAATAACAACAAAATAAAACTCTAGTAA  781

seq1  ATGAATTTTTACTGAATAAAAAAATCTTTATACTTTGTTGTAAATAGAGG  847
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGAATTTTTACTGAATAAAAAAATCTTTATACTTTGTTGTAAATAGAGG  831

seq1  ATATTAAAGATCTGTAGCAATATGTTTGAGTATTTAGGTATTTTAGAAAA  897
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATTAAAGATCTGTAGCAATATGTTTGAGTATTTAGGTATTTTAGAAAA  881

seq1  TTATGAAAATAGATCTGAATGCTGACACTTGGGCCATGCTTACTCAAGAA  947
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATGAAAATAGATCTGAATGCTGACACTTGGGCCATGCTTACTCAAGAA  931

seq1  TTC  950
      |||
seq2  TTC  934