BAC Information

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BAC

Clone NameB6Ng01-036G05
Chromosome17 (Build37)
Map Location 3,078,791 - 3,079,712
singlet/doubletsinglet
Overlap geneD030013I16Rik
Upstream geneLOC383196, LOC100040029, LOC432993
Downstream geneLOC100040128, 1700024P12Rik, LOC435499, LOC224487, Rbm16, LOC665812, LOC621579, LOC624144, Tiam2, LOC630810, Tfb1m, Cldn20, 1700102H20Rik, Nox3, 4930470H14Rik
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-036G05.bB6Ng01-036G05.g
ACCDH864579DH864580
length9201,141
definitionDH864579|Mus musculus domesticus DNA, BAC clone: B6Ng01-036G05, 5' end.DH864580|Mus musculus domesticus DNA, BAC clone: B6Ng01-036G05, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcaatcttaaaaggcacttataataaagagagcacaaggatccatc
cactagactaacgcgggaatggaaaatttagagagcacgccagactccag
gagcgagtttccgtgaaactctttttgcttcatgagcagcttttaggcat
ccctgcctgacaaactgactcgacctgagtgccgtggtactgactaagca
atgacccacctggagggaagggcaggtcttctgtactggctcgagggccc
aggaaggactccaaggagtaggttacgccctttacctgctccacctcaga
gttcttcacctgcccaaaggtgaggatcttgccatttgatgggctggtct
ggaggagacagagttttgatggtaaggagggggaagtcctcaccttcagt
ggctccccaaactctaccacctgccaagtcctcagggagctccagtccag
gtcaggagggagcctcccggagtgccacggccatgcggtgctgctaagcc
tggcttaaaggcagacaagggtttcatttcctaatgaagaatggagacaa
gagccaggccttaccacacagtgcaaatcgcagacaggctgtgcctgagg
cttcagcttacgccagaagaactcgctgaggttgtggtagtggtgcaggt
cctccactgcagcctcagtcatgttcaccccaaaggtccagatatacagg
ctgtagactggcctccggagccagtaaaggaagttctacttggtttgagg
cgaccacaggcacgtgacagcaaaacgagttggcatagttttatacatga
acactgtagaccacagtgcagaggctgaattgggcacatattttagttct
ttctacactccaactccccatcccccatgagtgagagagatgaaactcta
cagacgccacccctaaggcc
gaattccaggacagccagggctatacagagaaaccctgccttgaaaaacc
aaaccaaacaaacaaaaaaaccaacaacaacaacaacaaaaaataccccc
aaaacaaacaaaaaaacaaccaaccaaccaaccaaccaaaccaaaccaaa
ccaaaccaaaccaggttatctaagttatgatctagtcagaatagagccta
cctataagcccaagttatttgtaaatatattttgagtctgagtcttattt
ctgtgagcatgaggccgggaggaagaaccgggacctactgctatagatgg
ttaatcagtttgtgtgtgaaagccatagataacctgggctgttgttcctt
gatggagagggggtactgtccaccatattttttgaaacatggtctcttac
taggattctgacttactgactaggctcattggcccacagacaccagcggt
ctccctgtctctatcttaccagcactgagatacaagcacgcatcacccca
cccatggctttttacacagatgctgagtaccaaactcaagtcccgttggc
ttgtgttgccaccacttcctgagtgagccatcttccccagtccccaaagt
tctcaaatcgtttgttcatatatgcactagaataccctgataaccccaaa
tctgtgttatttcttttatggaaaagggttaggccctggggaggtagctg
cccattgcaggactagttacaaatacagaaaaccatagcagatttagtaa
gatggccaagcaagatgtacacattcttcaaaaaatgggcttgtttgact
tttgggggagctgtttctttcttaacttcagtatgcttggaaacttaagc
gacaccccaccctgctggagaccgaacaaaatggctagttactgtatcag
catagttctctcctgttccagctattagaaaccgcagcacagcaatatgg
attgtatcacgtagcttcatgtaaaggaaagagtagaactcaaagaaagc
ttgctcgtcctgggaaatcttacccacttgcatgcattcaatagaccttt
catcgagatttgggttccataatcacgaagacggtgtcaattggaccgtt
cctctcctcaaaaaaaataaatgtaggaggggggggggtgt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr17_3078791_3079712
seq2: B6Ng01-036G05.b_48_967

seq1  GAATTCAATCTTAAAAGGCACTTATAATAAAGAGAGCACAAGGATCCATC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAATCTTAAAAGGCACTTATAATAAAGAGAGCACAAGGATCCATC  50

seq1  CACTAGACTAACGCGGGAATGGAAAATTTAGAGAGCACGCCAGACTCCAG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACTAGACTAACGCGGGAATGGAAAATTTAGAGAGCACGCCAGACTCCAG  100

seq1  GAGCGAGTTTCCGTGAAACTCTTTTTGCTTCATGAGCAGCTTTTAGGCAT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGCGAGTTTCCGTGAAACTCTTTTTGCTTCATGAGCAGCTTTTAGGCAT  150

seq1  CCCTGCCTGACAAACTGACTCGACCTGAGTGCCGTGGTACTGACTAAGCA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCTGCCTGACAAACTGACTCGACCTGAGTGCCGTGGTACTGACTAAGCA  200

seq1  ATGACCCACCTGGAGGGAAGGGCAGGTCTTCTGTACTGGCTCGAGGGCCC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGACCCACCTGGAGGGAAGGGCAGGTCTTCTGTACTGGCTCGAGGGCCC  250

seq1  AGGAAGGACTCCAAGGAGTAGGTTACGCCCTTTACCTGCTCCACCTCAGA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGAAGGACTCCAAGGAGTAGGTTACGCCCTTTACCTGCTCCACCTCAGA  300

seq1  GTTCTTCACCTGCCCAAAGGTGAGGATCTTGCCATTTGATGGGCTGGTCT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTCTTCACCTGCCCAAAGGTGAGGATCTTGCCATTTGATGGGCTGGTCT  350

seq1  GGAGGAGACAGAGTTTTGATGGTAAGGAGGGGGAAGTCCTCACCTTCAGT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAGGAGACAGAGTTTTGATGGTAAGGAGGGGGAAGTCCTCACCTTCAGT  400

seq1  GGCTCCCCAAACTCTACCACCTGCCAAGTCCTCAGGGAGCTCCAGTCCAG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCTCCCCAAACTCTACCACCTGCCAAGTCCTCAGGGAGCTCCAGTCCAG  450

seq1  GTCAGGAGGGAGCCTCCCGGAGTGCCACGGCCATGCGGTGCTGCTAAGCC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCAGGAGGGAGCCTCCCGGAGTGCCACGGCCATGCGGTGCTGCTAAGCC  500

seq1  TGGCTTAAAGGCAGACAAGGGTTTCATTTCCTAATGAAGAATGGAGACAA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGCTTAAAGGCAGACAAGGGTTTCATTTCCTAATGAAGAATGGAGACAA  550

seq1  GAGCCAGGCCTTACCACACAGTGCAAATCGCAGACAGGCTGTGCCTGAGG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGCCAGGCCTTACCACACAGTGCAAATCGCAGACAGGCTGTGCCTGAGG  600

seq1  CTTCAGCTTACGCCAGAAGAACTCGCTGAGGTTGTGGTAGTGGTGCAGGT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCAGCTTACGCCAGAAGAACTCGCTGAGGTTGTGGTAGTGGTGCAGGT  650

seq1  CCTCCACTGCAGCCTCAGTCATGTTCACCCCAAAGGTCCAGATATACAGG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTCCACTGCAGCCTCAGTCATGTTCACCCCAAAGGTCCAGATATACAGG  700

seq1  CTGTAGACTGGCCTCCGGAGCCAGT-AAGGAAGTTCTACTTGG-TTGAGG  748
      ||||||||||||||||||||||||| ||||||||||||||||| ||||||
seq2  CTGTAGACTGGCCTCCGGAGCCAGTAAAGGAAGTTCTACTTGGTTTGAGG  750

seq1  CGACCACAGGCACGTGACAGC-AAACGAGTTGGCACAGTTTTATACAGGA  797
      ||||||||||||||||||||| ||||||||||||| ||||||||||| ||
seq2  CGACCACAGGCACGTGACAGCAAAACGAGTTGGCATAGTTTTATACATGA  800

seq1  ACACCTGTAGACCACAGTGCAGGAGGCTGAGTTGGTCACATATTTGAGTA  847
      ||| ||||||||||||||||| |||||||| |||| ||||||||| ||| 
seq2  ACA-CTGTAGACCACAGTGCA-GAGGCTGAATTGGGCACATATTTTAGTT  848

seq1  CTTTCATACACTCCAAACCCCCATCCCCACATGAGTGAGAGAGAAAGAAA  897
      ||||| ||||||||||  |||||||||| |||||||||||||| | ||||
seq2  CTTTC-TACACTCCAACTCCCCATCCCC-CATGAGTGAGAGAG-ATGAAA  895

seq1  CTCTACAGACGCCACCACGAAGGCC  922
      |||||||||||||||| | ||||||
seq2  CTCTACAGACGCCACCCCTAAGGCC  920