BAC Information

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BAC

Clone NameB6Ng01-037N11
Chromosome17 (Build37)
Map Location 52,750,216 - 52,751,276
singlet/doubletsinglet
Overlap genenone
Upstream geneSatb1, EG628919, LOC672987, EG328839
Downstream geneKcnh8, LOC668506, EG629036, LOC668512, Efhb, LOC668513, Rab5a, 4921523A10Rik, Pcaf, EG628822
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-037N11.bB6Ng01-037N11.g
ACCDH865583DH865584
length1,047942
definitionDH865583|Mus musculus domesticus DNA, BAC clone: B6Ng01-037N11, 5' end.DH865584|Mus musculus domesticus DNA, BAC clone: B6Ng01-037N11, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattctatcacatctcatgagccggggatctctctgcacagtcacacta
ctatgatatgtgtgtgtagaacatgtaaacatgtaaacccagggtactcg
ctgctatcacttctagtttccatctctttcagaaaggatttatcctttaa
ttttagccatttctcatccatatgctgtttctttttcgtctactagatta
tgctttaagtacttgtctcttaaagactgttttcaattggtgtttaagac
tcacatttggaagtactaaatgtattcactgtgcaaggcagctttgctca
tcaaagacaatctactgtccatttaaaaaagtatctattttctttgtgat
tttgatgcttagaatttgctgatgtactgactttaggatatccttgtgac
tgcttttttttttattgtaacgataatctccctgtgaagatattctgaat
cttatagctttttatagtgacatcatttgtatttttacttggtaagacgc
ttataaagaaaatttttctacctattttcagtttgcttttctgagagaga
attatactctcctgtatccagtaacatatcttagcagaaatgagtttgct
tttctcggcagtgaatttacaagacaaaaagagcatgcttggttctctag
ctctcaagtgtaatccaaagtgcttttctttgttcttccagagtttcttt
tgttctattaggtcttctggaccgaggtctttatcgtacttgtcatccaa
atgagcttcctgtttcagttattgaactaaagaaactggagatgagaaaa
tttgctttgctggagagaaggatctatctaagtgtttcagctgttgtgag
ggtaaaggagccaggttgtatggtagtacatttggggatgcagggtgtaa
tgctccttttggaacaaatatctgcatgtttctatgcacactttagccca
tatagctctaattaaaaacacgagaatggaacaagagctgctgatactac
ccttggtagtcgagcatttcacaagtagctggtactaccctgataaa
gaattcccacctgaggaataccgaatggcagagaagcacctgaaaaaaat
gttcaacatctttaatcgtcagggaaatgcaaatcaaaacaaccctgaga
ttccacctcaaaccagtcagaatggctaagataaaaaattcaggtgacag
cagatgctggcagggatgtggagaaagagggacactcctccattgttggt
gggattgcaagcttgtacaaccactctggaaatcagtctggcggttcctc
agaaaattggacatagtactaccagaggatccagcaacacctctcctggg
catatatccagaagatgtcccaatcggtaagaaggacacatgctccacta
tgttcatagcagccttatttataatagccagaagctggaaagaacccaga
gaggttctttcaacagaggaatggatatagaaaatgtggtacatttacac
aattgagtactactcagctattgaaaagaatgaatttatgaaattcctag
ggaaagggatggacctggagggcatcatcctgagtgaggtaacccaatca
caaaggaactcacacaatatgtactcactgataagtggatattagcccag
aaacttaggatacccaagatataagatacaatttgctaaacacatgaaac
tcaagaagaacgaagaccaaagtgtggacactttgcccgttcttagaatt
gggaacaaaacacccatggaaaggagttacagaaacaaaatttggagctg
tgacgaaaggatggaccatctagtgattgccatatgcagggatccatccc
ataaatcagcttccaatcgctgacaccattgcatacacaacaagattttg
ctgaaaggacccagattatagctgtctcttgtgataatatgccagggccc
tagcatacaccaaagtggatgctcacagccagctattggatg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr17_52750216_52751276
seq2: B6Ng01-037N11.b_46_1092

seq1  GAATTCTATCACATCTCATGAGCCGGGGATCTCTCTGCACAGTCACACTA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTATCACATCTCATGAGCCGGGGATCTCTCTGCACAGTCACACTA  50

seq1  CTATGATATGTGTGTGTAGAACATGTAAACATGTAAACCCAGGGTACTCG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTATGATATGTGTGTGTAGAACATGTAAACATGTAAACCCAGGGTACTCG  100

seq1  CTGCTATCACTTCTAGTTTCCATCTCTTTCAGAAAGGATTTATCCTTTAA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGCTATCACTTCTAGTTTCCATCTCTTTCAGAAAGGATTTATCCTTTAA  150

seq1  TTTTAGCCATTTCTCATCCATATGCTGTTTCTTTTTCGTCTACTAGATTA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTAGCCATTTCTCATCCATATGCTGTTTCTTTTTCGTCTACTAGATTA  200

seq1  TGCTTTAAGTACTTGTCTCTTAAAGACTGTTTTCAATTGGTGTTTAAGAC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTTTAAGTACTTGTCTCTTAAAGACTGTTTTCAATTGGTGTTTAAGAC  250

seq1  TCACATTTGGAAGTACTAAATGTATTCACTGTGCAAGGCAGCTTTGCTCA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCACATTTGGAAGTACTAAATGTATTCACTGTGCAAGGCAGCTTTGCTCA  300

seq1  TCAAAGACAATCTACTGTCCATTTAAAAAAGTATCTATTTTCTTTGTGAT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAAAGACAATCTACTGTCCATTTAAAAAAGTATCTATTTTCTTTGTGAT  350

seq1  TTTGATGCTTAGAATTTGCTGATGTACTGACTTTAGGATATCCTTGTGAC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGATGCTTAGAATTTGCTGATGTACTGACTTTAGGATATCCTTGTGAC  400

seq1  TGCTTTTTTTTTTATTGTAACGATAATCTCCCTGTGAAGATATTCTGAAT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTTTTTTTTTTATTGTAACGATAATCTCCCTGTGAAGATATTCTGAAT  450

seq1  CTTATAGCTTTTTATAGTGACATCATTTGTATTTTTACTTGGTAAGACGC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTATAGCTTTTTATAGTGACATCATTTGTATTTTTACTTGGTAAGACGC  500

seq1  TTATAAAGAAAATTTTTCTACCTATTTTCAGTTTGCTTTTCTGAGAGAGA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATAAAGAAAATTTTTCTACCTATTTTCAGTTTGCTTTTCTGAGAGAGA  550

seq1  ATTATACTCTCCTGTATCCAGTAACATATCTTAGCAGAAATGAGTTTGCT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTATACTCTCCTGTATCCAGTAACATATCTTAGCAGAAATGAGTTTGCT  600

seq1  TTTCTCGGCAGTGAATTTACAAGACAAAAAGAGCATGCTTGGTTCTCTAG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCTCGGCAGTGAATTTACAAGACAAAAAGAGCATGCTTGGTTCTCTAG  650

seq1  CTCTCAAGTGTAATCCAAAGTGCTTTTCTTTGTTCTTCCAGAGTTTCTTT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTCAAGTGTAATCCAAAGTGCTTTTCTTTGTTCTTCCAGAGTTTCTTT  700

seq1  TGTTCTATTAGGTCTTCTGGACCGAGGTCTTTATCGTACTTGTCATCCAA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTCTATTAGGTCTTCTGGACCGAGGTCTTTATCGTACTTGTCATCCAA  750

seq1  ATGAGCTTCCTGTTTCAGTTATTGAACTAAAGAAACTGGAGATGAGAAAA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGAGCTTCCTGTTTCAGTTATTGAACTAAAGAAACTGGAGATGAGAAAA  800

seq1  TTTGCTTTGCTGGAGAGAAGGATCTATCTAAGTGTTTCAGCTGTTGTGAG  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGCTTTGCTGGAGAGAAGGATCTATCTAAGTGTTTCAGCTGTTGTGAG  850

seq1  GGTTAAGGAGCCAGGTTGTATGGTAGTACATTTGGGGATGCAGGGTGTAA  900
      ||| ||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTAAAGGAGCCAGGTTGTATGGTAGTACATTTGGGGATGCAGGGTGTAA  900

seq1  TGCTCCTTTTGGAACCAAATATCTGCAATGTTTCTATGCACACTTTAGCC  950
      |||||||||||||| ||||||||||| |||||||||||||||||||||||
seq2  TGCTCCTTTTGGAA-CAAATATCTGC-ATGTTTCTATGCACACTTTAGCC  948

seq1  CATATAGCTCCTAAATAAAAAACACGGAGAATGGAACAAGAAGCTGCTGA  1000
      ||||||||||   ||| |||||||| |||||||||||||| |||||||||
seq2  CATATAGCTC--TAATTAAAAACAC-GAGAATGGAACAAG-AGCTGCTGA  994

seq1  TACTACCCTTGGTAGGTTCGGAGCAATTCCAACCAAAGTAGGCTGTTACT  1050
      |||||||||||||||  || ||||| |||  ||  ||||| |||| ||||
seq2  TACTACCCTTGGTAG--TC-GAGCATTTC--AC--AAGTA-GCTGGTACT  1036

seq1  ACCCTGATAAA  1061
      |||||||||||
seq2  ACCCTGATAAA  1047