BAC Information

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BAC

Clone NameB6Ng01-038N03
Chromosome17 (Build37)
Map Location 91,751,719 - 91,752,540
singlet/doubletsinglet
Overlap genenone
Upstream geneNrxn1, EG668871, LOC668872, LOC627235
Downstream geneLOC100043741, LOC100043742, EG640442
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-038N03.bB6Ng01-038N03.g
ACCDH866269DH866270
length1,283822
definitionDH866269|Mus musculus domesticus DNA, BAC clone: B6Ng01-038N03, 5' end.DH866270|Mus musculus domesticus DNA, BAC clone: B6Ng01-038N03, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcaaggcctatacctaaacacaataaaagcaatttacagcaaacca
actgccaatatcaaattaaatggagaaataattgaataaattccactaaa
accacacgcaaggcaaggatgctaattctccacatatctattcaatatag
tactcgaaattctagctagagcaataagacaataaaaggaaatcaggggg
atacaaattggcaaagaagaagtcatgtgatcactattcacagatgatat
gatagtatacataagtgacctaaaatctctaccagagaacttctacagct
gataaacaacttcagtgaagtggctggatataaaattaactcaaataaat
cagtaatcttcttttatacaagtggtaaatgggctgagaaagttattagt
gaaacaatacccttcacaattgtgacaaataatataaaatatcttggggt
aactctaactaaacaagtgaaagatctgtaggacaataacttcaagtctt
tcaagaaagaaatcaaagtagaccgcaacaaaatctagagatctcccaaa
gtcatggaatggaaaagttaatatagtaaaaatggtcatactaccaaaac
caatctacagacagattcaatgcaatccccatcaaaatcccaacacaatt
tttcaaagacgtggaaagaacaattctcaaaatttttatgggaaaacaaa
caaaacaaaacaaaacaaaaaaacagaatagccaaaataattcttaacaa
taaaagagcttctagtagaaacaatatccatggtctcaagctatactaca
gagcaaaagtgattaaaaattgcttgctatcagtacagcggcagacatat
tgatcaaaggaatcaaattgaaatcccagaaagaaaaccacacactttgg
tcacttgatctttgacaaaaatctaaaaatatacatggaaagaagaaagc
atcttcaataaatgtgctagtttaactggcagtctgtattagaaagtgaa
aatagattcatacttgtcaccttgcacaagctcagtccagtggatcaaga
cctccaacataaaccagataacttatctatagaagggaagtgggaaaagc
ctcaacctcatgccaagaggaatttcctaaccgaacctcatgtcctcgac
tgtaacctcagatgatggtgcccctccttaacctgaggttcttaagacag
tccacgcaatggcaataacctcgattggaattgctcaacctcccctcctc
ataagcctataaagacttcgtgaagtcactcac
gaattcatatttatagatacaactgggacctcccagatatataaagaatc
ttgttttgttgttgttgttgttttgttttgttttgtttttgtttgtttgt
ttttggtttgtataaagaaattgatagtatttattccatagcctttctac
atatgcatattatttaatatttaacactaaacacaacttccagaatgtag
tacacctcaataaatattgttatacttttcttcagttctttttttaaaaa
atatgtgtttaatagaagggatctcaaagtgtatatgtaccagtttgaaa
ttttatgtgctttgtacaagactgaataaaaaaataatacacatgaaata
aagtgtcaataaactatcctaccctactctttttctcataccaggagaac
atttttaccactgtcttgataaatgagtatctgacatattcctgaatatt
tttatgtgattagaaacatcagatgcagcaggtgttgactctatgtgaaa
ttgctctcctgctgctccatgttcttgtggaagtaagtggaaattcagtt
agtaaatcaattcatgcattgtatttatgaatgtaaagtactcaacattt
ctaggacatactcattgagagcttgttttttaattctgagacatacaatt
tcatttgtgaatatttgggcaatattgtttaaagaaatgcttgggaccac
tagatatgttatatacctgttttttgaaagagttaagctatacattgcct
taggaaataggtcagagtctcagtgattaagtagcctatttccattggga
aatttttaatgcatatactaat
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr17_91751719_91752540
seq2: B6Ng01-038N03.g_70_891

seq1  GAATTCATATTTATAGATACAACTGGGACCTCCCAGATATATAAAGAATC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCATATTTATAGATACAACTGGGACCTCCCAGATATATAAAGAATC  50

seq1  TTGTTTTGTTGTTGTTGTTGTTTTGTTTTGTTTTGTTTTTGTTTGTTTGT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTTTTGTTGTTGTTGTTGTTTTGTTTTGTTTTGTTTTTGTTTGTTTGT  100

seq1  TTTTGGTTTGTATAAAGAAATTGATAGTATTTATTCCATAGCCTTTCTAC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTGGTTTGTATAAAGAAATTGATAGTATTTATTCCATAGCCTTTCTAC  150

seq1  ATATGCATATTATTTAATATTTAACACTAAACACAACTTCCAGAATGTAG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATGCATATTATTTAATATTTAACACTAAACACAACTTCCAGAATGTAG  200

seq1  TACACCTCAATAAATATTGTTATACTTTTCTTCAGTTCTTTTTTTAAAAA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACACCTCAATAAATATTGTTATACTTTTCTTCAGTTCTTTTTTTAAAAA  250

seq1  ATATGTGTTTAATAGAAGGGATCTCAAAGTGTATATGTACCAGTTTGAAA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATGTGTTTAATAGAAGGGATCTCAAAGTGTATATGTACCAGTTTGAAA  300

seq1  TTTTATGTGCTTTGTACAAGACTGAATAAAAAAATAATACACATGAAATA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTATGTGCTTTGTACAAGACTGAATAAAAAAATAATACACATGAAATA  350

seq1  AAGTGTCAATAAACTATCCTACCCTACTCTTTTTCTCATACCAGGAGAAC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTGTCAATAAACTATCCTACCCTACTCTTTTTCTCATACCAGGAGAAC  400

seq1  ATTTTTACCACTGTCTTGATAAATGAGTATCTGACATATTCCTGAATATT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTTTACCACTGTCTTGATAAATGAGTATCTGACATATTCCTGAATATT  450

seq1  TTTATGTGATTAGAAACATCAGATGCAGCAGGTGTTGACTCTATGTGAAA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTATGTGATTAGAAACATCAGATGCAGCAGGTGTTGACTCTATGTGAAA  500

seq1  TTGCTCTCCTGCTGCTCCATGTTCTTGTGGAAGTAAGTGGAAATTCAGTT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGCTCTCCTGCTGCTCCATGTTCTTGTGGAAGTAAGTGGAAATTCAGTT  550

seq1  AGTAAATCAATTCATGCATTGTATTTATGAATGTAAAGTACTCAACATTT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTAAATCAATTCATGCATTGTATTTATGAATGTAAAGTACTCAACATTT  600

seq1  CTAGGACATACTCATTGAGAGCTTG-TTTTTAATTCTGAGACATACAATT  649
      ||||||||||||||||||||||||| ||||||||||||||||||||||||
seq2  CTAGGACATACTCATTGAGAGCTTGTTTTTTAATTCTGAGACATACAATT  650

seq1  TCATTTGTGAATATTTGGGCAATATTGTTTAAAGAAATGCTTGGGACCAC  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATTTGTGAATATTTGGGCAATATTGTTTAAAGAAATGCTTGGGACCAC  700

seq1  TAGATATGTTATATACCTG-TTTTTGAAAGAGTATAAGCTATACATTGCC  748
      ||||||||||||||||||| ||||||||||||| ||||||||||||||||
seq2  TAGATATGTTATATACCTGTTTTTTGAAAGAGT-TAAGCTATACATTGCC  749

seq1  TTAGGAAATAGGTCAGAGTCTCAGTGATTAAGTAGCCTATATGCAATGGG  798
      |||||||||||||||||||||||||||||||||||||||| | || ||||
seq2  TTAGGAAATAGGTCAGAGTCTCAGTGATTAAGTAGCCTATTTCCATTGGG  799

seq1  AAAATTTTAATGCATATAACTAAT  822
      ||| ||||||||||||| ||||||
seq2  AAATTTTTAATGCATAT-ACTAAT  822