BAC Information

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BAC

Clone NameB6Ng01-040O16
Chromosome17 (Build37)
Map Location 82,471,417 - 82,472,299
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC100043700, LOC100043704, Slc8a1, EG668832, LOC100043707
Downstream geneLOC625467, LOC668836, EG433141, EG625514, LOC100043711
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-040O16.bB6Ng01-040O16.g
ACCDH867739DH867740
length1,039869
definitionDH867739|Mus musculus domesticus DNA, BAC clone: B6Ng01-040O16, 5' end.DH867740|Mus musculus domesticus DNA, BAC clone: B6Ng01-040O16, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctttgttcagttctgagccccattttttaagggggttatttgatt
ttctgaggtccaccttcttgagttctttatatatgttggatattagtccc
ctatctgatttaggataggtaaagatcctttcccagtctgttggtggtct
ttttgtcttatagacagtgtcttttgccttgcagaaactttggagtttca
ttaggtcccatttgtcaattctcgatcttacagcacaagccattgctgtt
ctgttcaggaatttttcccctgtgcccatatcttcaaggcttttccccac
tttctcctctataagttccagtgtctctggttttatgtgaagttccttga
tccacttagatttgaccttagtacaaggagataagtatggatcgattcgc
attcttctacatgataacaaccagttgtgccagcaccaattgttgaaaat
gctgtctttcttccactggatggttttggctcccttgtcgaagatcaagt
gaccataggtgtgtgggttcatttctgggtcttcaattctattccattgg
tccacttgtctgtctctataccagtaccatgcagtttttatcacaattgc
tctgtagtaaagctttaggtcaggcatggtgattccaccagaggttcttt
tatccttgagaagagtttttgctatcctcggttttttgttattccagatg
aatttgcaaattgctccttctaattcgttgaagaattgagttggaatttt
aatggggattgcattgaatctgtagattgctttggcaagatagccatttt
ttacaatgttggtcctgccaatccatgagcatgggagatctttccatctt
ctgagatcttctttaatttctttcttcagggacttgaagtttttatcata
cagatctttcacttgttcgttagagtcacgccgagatattttatattatt
gtggctattgagaatggtgttgattccctaattctttctcagcctgttta
ttcttgtgagagaatggccatttgactttttgaggttat
gaattcagctacttaagccatagagacaaagtgttgcaacttcaagccca
ggttggtctataatgtgagctcaaggtcctagtgaggaactgtctgaaaa
tgaaaattaaataaaagatatgagaataaaaaagaggacgagtgttgtct
tacttagtagaggtagcgcatagagataaaacccaagatgacacgagagt
tctggtcaaattccttggagcaaattttcattcattattttgtctgtgtg
gttctgacatatcagtatgagtgtagacacacatgtgtcacagaatccaa
acaatttttggaagtgtttctgaaggggcaaaggcctctgcactttctca
ccattcagagagcttccccaccccctcaccccctactctttctcactgct
tcttggagctccccatcccttccctggcttttcagagagggcccagtctg
gagccataacattgctatccctgttttcatggtggcattccataaggagc
acaccccagggtcaacagatgccagtttgagaatagacaaatggcaaaat
ccctcagtccccatgttaccaaattggcacactccctgatagatgaccaa
gtacttaccaatgaaggtggcacctgtcattggggaaaatcgaagaccaa
agataagtgccccacatttgagccatgaaggagggcattaagcatcccca
gacagctgtgaccagtttgtaaagacatactagtcctgatagcacataaa
gtatttcccagaacagaagagtccccttccagttgcacaattctgccctg
ctgcttgaacaatgatttggtgttgaagatgatttcctttgtcacattcc
ctgccactaagcccaaaaa
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr17_82471417_82472299
seq2: B6Ng01-040O16.g_68_936 (reverse)

seq1  TTTTTGGGCTTTAGTGTGACAGGGGGAATGTGACAAGGGAAATCATCCTT  50
      |||||||||||    ||| ||  ||||||||||||| ||||||||| |||
seq2  TTTTTGGGCTT---AGTGGCA--GGGAATGTGACAAAGGAAATCAT-CTT  44

seq1  CAAACACAATATCATTTGTTCAAGCAGCAGGGCAGAATTGTGCAACTGGG  100
      | ||||| | |||| |||||||||||||||||||||||||||||||||| 
seq2  C-AACACCAAATCA-TTGTTCAAGCAGCAGGGCAGAATTGTGCAACTGGA  92

seq1  AGGGGGGACTCTTCTGTTCTGGGAAATAACTTTATGGTGCTATCAGGAAC  150
      |  |||||||||||||||||||||||| ||||||| ||||||||||| ||
seq2  A--GGGGACTCTTCTGTTCTGGGAAAT-ACTTTAT-GTGCTATCAGG-AC  137

seq1  TAGTATGTCTTTACAAACTGGTCACAGCTGTCTGGGGATGCTTAATTGCC  200
      ||||||||||||||||||||||||||||||||||||||||||||| ||||
seq2  TAGTATGTCTTTACAAACTGGTCACAGCTGTCTGGGGATGCTTAA-TGCC  186

seq1  CTTCCTTCATGGCTCAAATGTGGGGCACTTATCTTTGGTCTTCGATTTT-  249
      | ||||||||||||||||||||||||||||||||||||||||||||||| 
seq2  C-TCCTTCATGGCTCAAATGTGGGGCACTTATCTTTGGTCTTCGATTTTC  235

seq1  CCCAATGACAGGTGCCACCTTCATTGGTAAGTACTTGGTCATCTATCAGG  299
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCAATGACAGGTGCCACCTTCATTGGTAAGTACTTGGTCATCTATCAGG  285

seq1  GAGTGTGCCAATTTGGTAACATGGGGACTGAGGGATTTTGCCATTTGTCT  349
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGTGTGCCAATTTGGTAACATGGGGACTGAGGGATTTTGCCATTTGTCT  335

seq1  ATTCTCAAACTGGCATCTGTTGACCCTGGGGTGTGCTCCTTATGGAATGC  399
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCTCAAACTGGCATCTGTTGACCCTGGGGTGTGCTCCTTATGGAATGC  385

seq1  CACCATGAAAACAGGGATAGCAATGTTATGGCTCCAGACTGGGCCCTCTC  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACCATGAAAACAGGGATAGCAATGTTATGGCTCCAGACTGGGCCCTCTC  435

seq1  TGAAAAGCCAGGGAAGGGATGGGGAGCTCCAAGAAGCAGTGAGAAAGAGT  499
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAAAAGCCAGGGAAGGGATGGGGAGCTCCAAGAAGCAGTGAGAAAGAGT  485

seq1  AGGGGGTGAGGGGGTGGGGAAGCTCTCTGAATGGTGAGAAAGTGCAGAGG  549
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGGGGTGAGGGGGTGGGGAAGCTCTCTGAATGGTGAGAAAGTGCAGAGG  535

seq1  CCTTTGCCCCTTCAGAAACACTTCCAAAAATTGTTTGGATTCTGTGACAC  599
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTTGCCCCTTCAGAAACACTTCCAAAAATTGTTTGGATTCTGTGACAC  585

seq1  ATGTGTGTCTACACTCATACTGATATGTCAGAACCACACAGACAAAATAA  649
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTGTGTCTACACTCATACTGATATGTCAGAACCACACAGACAAAATAA  635

seq1  TGAATGAAAATTTGCTCCAAGGAATTTGACCAGAACTCTCGTGTCATCTT  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAATGAAAATTTGCTCCAAGGAATTTGACCAGAACTCTCGTGTCATCTT  685

seq1  GGGTTTTATCTCTATGCGCTACCTCTACTAAGTAAGACAACACTCGTCCT  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGTTTTATCTCTATGCGCTACCTCTACTAAGTAAGACAACACTCGTCCT  735

seq1  CTTTTTTATTCTCATATCTTTTATTTAATTTTCATTTTCAGACAGTTCCT  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTTTTATTCTCATATCTTTTATTTAATTTTCATTTTCAGACAGTTCCT  785

seq1  CACTAGGACCTTGAGCTCACATTATAGACCAACCTGGGCTTGAAGTTGCA  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACTAGGACCTTGAGCTCACATTATAGACCAACCTGGGCTTGAAGTTGCA  835

seq1  ACACTTTGTCTCTATGGCTTAAGTAGCTGAATTC  883
      ||||||||||||||||||||||||||||||||||
seq2  ACACTTTGTCTCTATGGCTTAAGTAGCTGAATTC  869