BAC Information

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BAC

Clone NameB6Ng01-042M06
Chromosome17 (Build37)
Map Location 38,409,383 - 38,476,052
singlet/doubletdoublet
Overlap geneOlfr138, Olfr137, Olfr762-ps1, Olfr136
Upstream geneH2-M3, Olfr755-ps1, Olfr99, Olfr756-ps1, Olfr101, Olfr102, Olfr103, Olfr104, GA_x5J8B7W5KGR-1115818-1115257, Olfr105, Olfr758-ps1, Olfr106, Olfr107, Olfr759-ps1, Olfr108, Olfr760-ps1, Olfr109, H2-M2, Olfr110, Olfr111, Olfr112, Olfr113, Olfr114, Olfr115, Olfr116, Olfr117, Olfr118, Olfr119, Scocp, Olfr120, Olfr1558-ps1, Olfr121, Olfr122, Olfr123, Olfr124, Olfr125, LOC672822, Olfr126, Olfr127, Olfr128, Ppia-ps17_697.1, Olfr761, Olfr1552-ps1, LOC100043265, Olfr129, Olfr130, Olfr131, Olfr132, Olfr133, Olfr134, Olfr135
Downstream geneLOC626985, LOC100043297
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-042M06.bB6Ng01-042M06.g
ACCDH869040DH869041
length1,0081,111
definitionDH869040|Mus musculus domesticus DNA, BAC clone: B6Ng01-042M06, 5' end.DH869041|Mus musculus domesticus DNA, BAC clone: B6Ng01-042M06, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(38,475,506 - 38,476,052)(38,409,383 - 38,410,505)
sequence
gaattcccagaagaaggagataaagaatttgactttgaacatgagagaga
atgagagagaataggtttcagaaaagcagatattcccctgttcaggacct
tttagcaaaagagaagaaaagtggaaataagctatttcagagctctctta
ggcacaggaggaaattgggagatgtcctgcttcctctctggctcctatgg
agatattcttaattttggttaggatatctgggttcctttgagacatcaag
ttctcttccctctctgtctattgtttgtccttgatgcaccaatttgtcca
tatgtctgtcaatttatgtttgttttgttttgttgtttgaatgattgttg
ttctgtgtttcatgttgaaagaaaatgtttaaaactttatctgctggctg
tccatccttttagtttatcttgtttgaaaggaagtctcaattttcacagc
agaaactgataagttacactgcactgtggctgggagtcaagtacagctgg
aaaagccctgctagagactgattatctaagcgagcagctcttaaagtggc
caacagatttttgcttgtaacagaaagttagcttaaaatttgtaactcag
agttggagtcattctaaacaacacatggcatgagccaactcaggaaaaca
ggtctttagagatacttctaaattgggataatattttgtgtaattattat
tctagaaactagatttataatggatagaatttaaaacaatgtctcttcaa
tgaggtattaaaagctgcactgtcatgcattcatatataagagctggcat
ccaatcttcataatgtgaaactgatgattttggtattgatttttaaagaa
aatatattgtttaaaattgggttttgctttccaaaagttataaatatatt
ctaattttgcaaaagaaacttaaaaattatgattaaaattgccagtgttc
cattgactgcagtttgcagtttgattgcaagctcacgatttttactcccc
atatattg
gaattctccttaaaaagggacggggtttcgttttttctctctcttgcttc
ttgctctcttgcttcctgcaccctggctcctgaagatgtaagaaataaag
ctttgccgcagaagattctggtctgtggtgttcttcctggccggtcgtga
gaacgcgtctaataacagctgctatgaaaccactttcttatctgaagcaa
tttgtgttgaagaactaccaatatcaaatttagaagaagagggataatat
aaacaagggtataagtgcttgaaaacatagagatcaaaataaagggtcaa
taaaacagtcttggaacattgaaaatatgcactacactgtcaaaatttgg
ccaaactaaaaaaaacaaaaaacaaaaaacaaagaaaaccctgaagacac
aaaataatttgattagtttggacaagtttttgacagtatacaacatattt
tcaatgttccaactatgttttttctaacctttattttgttctctcagttt
taaagcatttctgtcctaatttttttatcttctttcttctaacaattttg
atatttgcagatcttgttacttaaaccctttatgtaccttaataggtaat
ttatttagagcacatttctatttgtttaaatgcagtccaaaaacagctat
aatctcataacagctttcattctgcccttttagctaaggttatactgctt
ttttttccatgtaactttagggaaaaattaatttacttcctaaattcctc
aatgataacacttatcgattaaagttatattgtttagttactatgtttta
gacaatttctgcagattatatatctgttgatctatattctattcaattat
aatcttataagacacaagatattaattcatttttttctttatttacatgg
tgcttggtagtagtggtacatgtctttagttccagtactcacaaggcaga
ggcaggtagatctctgactttcatgccagttaggtctacaagaaaggccc
aggacatccagggttacacggagaaccctgtcttagtcagggttggagaa
agcaaaacgttaaacaacaacaaacacatatcaacatggaagatgctttt
gaatttaacta
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr17_38475506_38476052
seq2: B6Ng01-042M06.b_42_588 (reverse)

seq1  ACTTTAAGAGCTGCTCGCTTAGATAATCAGTCTCTAGCAGGGCTTTTCCA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTTAAGAGCTGCTCGCTTAGATAATCAGTCTCTAGCAGGGCTTTTCCA  50

seq1  GCTGTACTTGACTCCCAGCCACAGTGCAGTGTAACTTATCAGTTTCTGCT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTGTACTTGACTCCCAGCCACAGTGCAGTGTAACTTATCAGTTTCTGCT  100

seq1  GTGAAAATTGAGACTTCCTTTCAAACAAGATAAACTAAAAGGATGGACAG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGAAAATTGAGACTTCCTTTCAAACAAGATAAACTAAAAGGATGGACAG  150

seq1  CCAGCAGATAAAGTTTTAAACATTTTCTTTCAACATGAAACACAGAACAA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGCAGATAAAGTTTTAAACATTTTCTTTCAACATGAAACACAGAACAA  200

seq1  CAATCATTCAAACAACAAAACAAAACAAACATAAATTGACAGACATATGG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAATCATTCAAACAACAAAACAAAACAAACATAAATTGACAGACATATGG  250

seq1  ACAAATTGGTGCATCAAGGACAAACAATAGACAGAGAGGGAAGAGAACTT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAAATTGGTGCATCAAGGACAAACAATAGACAGAGAGGGAAGAGAACTT  300

seq1  GATGTCTCAAAGGAACCCAGATATCCTAACCAAAATTAAGAATATCTCCA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATGTCTCAAAGGAACCCAGATATCCTAACCAAAATTAAGAATATCTCCA  350

seq1  TAGGAGCCAGAGAGGAAGCAGGACATCTCCCAATTTCCTCCTGTGCCTAA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGGAGCCAGAGAGGAAGCAGGACATCTCCCAATTTCCTCCTGTGCCTAA  400

seq1  GAGAGCTCTGAAATAGCTTATTTCCACTTTTCTTCTCTTTTGCTAAAAGG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGAGCTCTGAAATAGCTTATTTCCACTTTTCTTCTCTTTTGCTAAAAGG  450

seq1  TCCTGAACAGGGGAATATCTGCTTTTCTGAAACCTATTCTCTCTCATTCT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTGAACAGGGGAATATCTGCTTTTCTGAAACCTATTCTCTCTCATTCT  500

seq1  CTCTCATGTTCAAAGTCAAATTCTTTATCTCCTTCTTCTGGGAATTC  547
      |||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTCATGTTCAAAGTCAAATTCTTTATCTCCTTCTTCTGGGAATTC  547

seq1: chr17_38409383_38410505
seq2: B6Ng01-042M06.g_66_1176

seq1  GAATTCTCCTTAAAAAGGGACGGGGTTTCGTTTTTTCTCTCTCTTGCTTC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTCCTTAAAAAGGGACGGGGTTTCGTTTTTTCTCTCTCTTGCTTC  50

seq1  TTGCTCTCTTGCTTCCTGCACCCTGGCTCCTGAAGATGTAAGAAATAAAG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGCTCTCTTGCTTCCTGCACCCTGGCTCCTGAAGATGTAAGAAATAAAG  100

seq1  CTTTGCCGCAGAAGATTCTGGTCTGTGGTGTTCTTCCTGGCCGGTCGTGA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTGCCGCAGAAGATTCTGGTCTGTGGTGTTCTTCCTGGCCGGTCGTGA  150

seq1  GAACGCGTCTAATAACAGCTGCTATGAAACCACTTTCTTATCTGAAGCAA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAACGCGTCTAATAACAGCTGCTATGAAACCACTTTCTTATCTGAAGCAA  200

seq1  TTTGTGTTGAAGAACTACCAATATCAAATTTAGAAGAAGAGGGATAATAT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGTGTTGAAGAACTACCAATATCAAATTTAGAAGAAGAGGGATAATAT  250

seq1  AAACAAGGGTATAAGTGCTTGAAAACATAGAGATCAAAATAAAGGGTCAA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACAAGGGTATAAGTGCTTGAAAACATAGAGATCAAAATAAAGGGTCAA  300

seq1  TAAAACAGTCTTGGAACATTGAAAATATGCACTACACTGTCAAAATTTGG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAACAGTCTTGGAACATTGAAAATATGCACTACACTGTCAAAATTTGG  350

seq1  CCAAACTAAAAAAAACAAAAAACAAAAAACAAAGAAAACCCTGAAGACAC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAAACTAAAAAAAACAAAAAACAAAAAACAAAGAAAACCCTGAAGACAC  400

seq1  AAAATAATTTGATTAGTTTGGACAAGTTTTTGACAGTATACAACATATTT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAATAATTTGATTAGTTTGGACAAGTTTTTGACAGTATACAACATATTT  450

seq1  TCAATGTTCCAACTATGTTTTTTCTAACCTTTATTTTGTTCTCTCAGTTT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAATGTTCCAACTATGTTTTTTCTAACCTTTATTTTGTTCTCTCAGTTT  500

seq1  TAAAGCATTTCTGTCCTAATTTTTTTATCTTCTTTCTTCTAACAATTTTG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAGCATTTCTGTCCTAATTTTTTTATCTTCTTTCTTCTAACAATTTTG  550

seq1  ATATTTGCAGATCTTGTTACTTAAACCCTTTATGTACCTTAATAGGTAAT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATTTGCAGATCTTGTTACTTAAACCCTTTATGTACCTTAATAGGTAAT  600

seq1  TTATTTAGAGCACATTTCTATTTGTTTAAATGCAGTCCAAAAACAGCTAT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATTTAGAGCACATTTCTATTTGTTTAAATGCAGTCCAAAAACAGCTAT  650

seq1  AATCTCATAACAGCTTTCATTCTGCCCTTTTAGCTAAGGTTATACTGCTT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATCTCATAACAGCTTTCATTCTGCCCTTTTAGCTAAGGTTATACTGCTT  700

seq1  TTTTTTCCATGTAACTTTAGGGAAAAATTAATTTACTTCCTAAATTCCTC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTTCCATGTAACTTTAGGGAAAAATTAATTTACTTCCTAAATTCCTC  750

seq1  AATGATAACACTTATCGATTAAAGTTATATTGTTTAGTTACTATGTTTTA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGATAACACTTATCGATTAAAGTTATATTGTTTAGTTACTATGTTTTA  800

seq1  GACAATTTCTGCAGATTATATATCTGTTGATCTATATTCTATTCAATTAT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACAATTTCTGCAGATTATATATCTGTTGATCTATATTCTATTCAATTAT  850

seq1  AATCTTATAAGACACAAGATATTAATTCATTTTTTTCTTTATTTACATGG  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATCTTATAAGACACAAGATATTAATTCATTTTTTTCTTTATTTACATGG  900

seq1  TGCTTGGTAGTAGTGGTACATGTCTTTAGTTCCAGTACTCACAAGGCAGA  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTTGGTAGTAGTGGTACATGTCTTTAGTTCCAGTACTCACAAGGCAGA  950

seq1  GGCAGGTAGATCTCTGACTTTCATGCCAGTTAGGTCTACAAAGAAAGGCC  1000
      ||||||||||||||||||||||||||||||||||||||| ||||||||||
seq2  GGCAGGTAGATCTCTGACTTTCATGCCAGTTAGGTCTAC-AAGAAAGGCC  999

seq1  CAAGACATCCAGGGTTACACGGAGAAACCCTGTCTTAGTCAGGGGTTGGA  1050
      || ||||||||||||||||||||| |||||||||||||||| ||||||||
seq2  CAGGACATCCAGGGTTACACGGAG-AACCCTGTCTTAGTCA-GGGTTGGA  1047

seq1  GAAAGCAAAAACGTAAACAAACAAACAAACACATATCAACAATGAAAGGT  1100
      ||||||||||   |||||||   ||||||||||||||||| ||| |||  
seq2  GAAAGCAAAACGTTAAACAA--CAACAAACACATATCAAC-ATGGAAG--  1092

seq1  ATGCTTTTTTGAAAATTTAACTA  1123
      ||||||||     ||||||||||
seq2  ATGCTTTT----GAATTTAACTA  1111