BAC Information

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BAC

Clone NameB6Ng01-048A04
Chromosome17 (Build37)
Map Location 71,128,566 - 71,129,696
singlet/doubletsinglet
Overlap geneDlgap1
Upstream geneLOC100043630, LOC623112, LOC623143
Downstream geneTgif1, LOC668724, LOC546695, LOC240156, Mylc2b, 2900073G15Rik, Myom1, Lpin2, Emilin2, LOC100043644, Smchd1, LOC100043879, Ndc80, LOC668740, Spdya, LOC623451, Wdr43, 4632412N22Rik, BC027072
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-048A04.bB6Ng01-048A04.g
ACCDH872709DH872710
length1,0951,181
definitionDH872709|Mus musculus domesticus DNA, BAC clone: B6Ng01-048A04, 5' end.DH872710|Mus musculus domesticus DNA, BAC clone: B6Ng01-048A04, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcagacctgtgagcactcaacggaaaagaaagtcagaatcttttcc
tatatgtttgtggaaagagaattgacacagagacactttgacttacaaaa
caaacaaacaaacaaaaaactcccctgctctgtttcacttgccacttaga
gagcccctgccccttctcctactgcagccctcccattgtgcttggtactt
agaccgtaagagtttgctgactataaacaaacatacaaaaagatatcttg
gcattaaaaacttacaggaatcagttggttctctgcactgtatggttccc
agggatccaacttaggtcatcaagtgagccacctcaccagccccaagtcc
ctatttttcagaataaaagaaagagctcacagcaggctcatgactgggcc
gaacaagctctagagaagccacaccaccgttctctttgaccacaatgaca
gccactataagagattcctcctttgatcacaagtgacttcatatttacac
aggtgtaaatatttgagcgcttagtgatctcagctaaacgagatactaaa
acaaaaagtaaaaagcaagagaggggcctgagaaacagaggcccgagaaa
cagccactttaagtctaaggctacaatccctgctttgccctcctagaaat
tctgggttcaacacactccataccatctccttaaacaaccaaacaaccag
cacccacccttctcggttctctttcctttgcttaacaatgatgtaaccta
atcagatcgttcctagcacctgagttttaaaggcgcgcccttcacaggtt
tcaaatttcaaaagcctgaagtccagcctaaatccaagctgacctcaaat
gtatggctcttaattctacagagagcccctctccgcccccgcccaccctt
ctttccttttccctctctctgctctctctttcttctctcctctattctct
cttcattcttctctttgcatgttatttgttttaagatcattagtctcaga
aagcaagagactatgacttcacttagcaagcttgctaaattgtcagtgaa
ctgaagactagcctagcgtagtacatgagctctgtagagggccta
gaattctttctattgcttccatacacaccgtgaccaaagcaacttaagga
gtgtcttagtcagtgctctattgctgggacaattgctgggacaagagaca
ccaccaccataggaactcttatcagggaaagcatttaattgaatcttgag
aacagtttcaaagggttagtccattttcatcacggtaggggagcacggag
gcatgcaggcaggtgtgttgctggagaagtagctgagagttctacttctt
gatctgcaggcagcaaaaagagccagacagtgtgccaacttgagcttttg
aaaccccaaagcccactcccagtgacacacttcatccaacaagaccatac
ctcctaattcctctcaagtagtgccactccctgatgaccatcatagggag
aaatggttttatttggtttacatgttcatcatcagtcaaggaatgcctgg
gcaggaactcaagtagaacctggaggcaggaaccaaagcagagaccatgg
aggaatgttgctcactggcttgcgctaatggcttgcatcctatggcttag
ttaggctgctttttttatgcaaccaaaggtcagttgcccatgggtggcac
agtgttctggttcccaccatgtcaaccattcagcaagaaatgacccgcag
acaagccaatcatgtctaatgacccacaggctaatataatggagacattt
tctcagtagcagttcttcccagatgacctgagcttgtgtcaagttgacaa
aaacctaagcagtgcagctgcccctcagtgtacaggaaagtgatgctctg
atggtcctgttgtccatttaaaatatcaaaatgcatttaccactgagcat
tgtggagcaggctatgaaagcggtatttggaagctgagctggtgatcatg
agtgtcagtcagcctgactatgtagaagactatctcagctgagagatggt
cagtgttaagagtactgactgctcttcaaaggtctgagtcaaatccagca
ccacatggtggcttcacattcgtatggaatctgatgcctcttctgtgcat
ctgagacgcttcgatctgaattaatataatgtataaatgcatatatacat
aagaagttttcagagacgtccgagagcacgtgtgatcaatcatctctgcg
tgcttgctaacgaggagggtatcagcatgta
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr17_71128566_71129696
seq2: B6Ng01-048A04.b_44_1138

seq1  GAATTCAGACCTGTGAGCACTCAACGGAAAAGAAAGTCAGAATCTTTTCC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAGACCTGTGAGCACTCAACGGAAAAGAAAGTCAGAATCTTTTCC  50

seq1  TATATGTTTGTGGAAAGAGAATTGACACAGAGACACTTTGACTTACAAAA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATATGTTTGTGGAAAGAGAATTGACACAGAGACACTTTGACTTACAAAA  100

seq1  CAAACAAACAAACAAAAAACTCCCCTGCTCTGTTTCACTTGCCACTTAGA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAACAAACAAACAAAAAACTCCCCTGCTCTGTTTCACTTGCCACTTAGA  150

seq1  GAGCCCCTGCCCCTTCTCCTACTGCAGCCCTCCCATTGTGCTTGGTACTT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGCCCCTGCCCCTTCTCCTACTGCAGCCCTCCCATTGTGCTTGGTACTT  200

seq1  AGACCGTAAGAGTTTGCTGACTATAAACAAACATACAAAAAGATATCTTG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGACCGTAAGAGTTTGCTGACTATAAACAAACATACAAAAAGATATCTTG  250

seq1  GCATTAAAAACTTACAGGAATCAGTTGGTTCTCTGCACTGTATGGTTCCC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCATTAAAAACTTACAGGAATCAGTTGGTTCTCTGCACTGTATGGTTCCC  300

seq1  AGGGATCCAACTTAGGTCATCAAGTGAGCCACCTCACCAGCCCCAAGTCC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGGATCCAACTTAGGTCATCAAGTGAGCCACCTCACCAGCCCCAAGTCC  350

seq1  CTATTTTTCAGAATAAAAGAAAGAGCTCACAGCAGGCTCATGACTGGGCC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTATTTTTCAGAATAAAAGAAAGAGCTCACAGCAGGCTCATGACTGGGCC  400

seq1  GAACAAGCTCTAGAGAAGCCACACCACCGTTCTCTTTGACCACAATGACA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAACAAGCTCTAGAGAAGCCACACCACCGTTCTCTTTGACCACAATGACA  450

seq1  GCCACTATAAGAGATTCCTCCTTTGATCACAAGTGACTTCATATTTACAC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCACTATAAGAGATTCCTCCTTTGATCACAAGTGACTTCATATTTACAC  500

seq1  AGGTGTAAATATTTGAGCGCTTAGTGATCTCAGCTAAACGAGATACTAAA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGTGTAAATATTTGAGCGCTTAGTGATCTCAGCTAAACGAGATACTAAA  550

seq1  ACAAAAAGTAAAAAGCAAGAGAGGGGCCTGAGAAACAGAGGCCCGAGAAA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAAAAAGTAAAAAGCAAGAGAGGGGCCTGAGAAACAGAGGCCCGAGAAA  600

seq1  CAGCCACTTTAAGTCTAAGGCTACAATCCCTGCTTTGCCCTCCTAGAAAT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGCCACTTTAAGTCTAAGGCTACAATCCCTGCTTTGCCCTCCTAGAAAT  650

seq1  TCTGGGTTCAACACACTCCATACCATCTCCTTAAACAACCAAACAACCAG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGGGTTCAACACACTCCATACCATCTCCTTAAACAACCAAACAACCAG  700

seq1  CACCCACCCTTCTCGGTTCTCTTTCCTTTGCTTAACAATGATGTAACCTA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACCCACCCTTCTCGGTTCTCTTTCCTTTGCTTAACAATGATGTAACCTA  750

seq1  ATCAGATCGTTCCTAGCACCTGAGTTTTAAAGGCGCGCCCTTCACAGGTT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCAGATCGTTCCTAGCACCTGAGTTTTAAAGGCGCGCCCTTCACAGGTT  800

seq1  TCAAATTTCAAAAGCCTGAAGTCCAGCCTAAATCCAAGCTGACCTCAAAT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAAATTTCAAAAGCCTGAAGTCCAGCCTAAATCCAAGCTGACCTCAAAT  850

seq1  GTATGGCCCTTAATTCTACAGAGAGCCCCCCCCGCCCCCCGCCCACCCCT  900
      ||||||| ||||||||||||||||||||| | |  |||||||||| ||||
seq2  GTATGGCTCTTAATTCTACAGAGAGCCCCTCTCCGCCCCCGCCCA-CCCT  899

seq1  TCCTTTTCCTTTTCCCCTCCTCTCTGCCTCTCTTCCTTTCTTCTCTCCCT  950
      ||  ||||||||||||   ||||||| ||||||  |||||||||||||  
seq2  TC--TTTCCTTTTCCC--TCTCTCTG-CTCTCT--CTTTCTTCTCTCC--  940

seq1  TCTATTTTCTCTCTTTCCATTTCTTCCTCTTTGCATGTATATTTTGTTTT  1000
      ||||  |||||||||  || ||||| |||||||||||| || ||||||||
seq2  TCTA--TTCTCTCTT--CA-TTCTT-CTCTTTGCATGT-TA-TTTGTTTT  982

seq1  TTAAAGATCATTTAGTTCTCAGAAAGCAAAGAGACTATGACTTTCACTTA  1050
         ||||||| |||| ||||||||||| ||||||||||||| ||||||| 
seq2  ---AAGATCA-TTAG-TCTCAGAAAGC-AAGAGACTATGAC-TTCACTT-  1024

seq1  AGCAAAGCTGTGCTAAAATATGTCAGTGAGACTGAAGTACTAGCTCAGCA  1100
      ||| ||||| |||||||   ||||||||| ||||||| ||||||  ||| 
seq2  AGC-AAGCT-TGCTAAA--TTGTCAGTGA-ACTGAAG-ACTAGCCTAGC-  1067

seq1  GTTAAGACCATGAGCTCCTGTAGAGGGCCTA  1131
      ||  ||  |||||||| ||||||||||||||
seq2  GT--AGTACATGAGCT-CTGTAGAGGGCCTA  1095