BAC Information

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BAC

Clone NameB6Ng01-048I10
Chromosome17 (Build37)
Map Location 69,016,258 - 69,017,214
singlet/doubletsinglet
Overlap genenone
Upstream geneLama1, Arhgap28, D930040M24Rik
Downstream geneEG622645, Epb4.1l3, 2410021H03Rik, Zfp161, C030034I22Rik, A930029G22Rik, A330050F15Rik, LOC100043623, LOC668720, LOC673535
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-048I10.bB6Ng01-048I10.g
ACCDH873057DH873058
length1,157952
definitionDH873057|Mus musculus domesticus DNA, BAC clone: B6Ng01-048I10, 5' end.DH873058|Mus musculus domesticus DNA, BAC clone: B6Ng01-048I10, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattccttctttatgtcctctaccatcatcatgagatatgcttttaaat
ccaggtctaccttttcaggtgtgttagggtgtcctggattgggcgaagtg
ggtgttctgggttctgatgatggtgagtggttctggcttctgttagtagg
attcttacgtttacctttcgccatctggcaatctctggagttagttgtta
tagttgtctttgttaagagattgttcctctgttgattttgttaccctcta
tcagcaggcgtgggagacaagctctcttctctgagtttcagtggtcagag
cagtctctgtaggcaagctctcctctttcagggaaggtgtacagttatct
ggtgtttggacctcctcctggctgaaggtgaaggcccaaaacaggatctt
tcccagaagctgtgttgctttggccaggaaggtggccagttgtctggagt
cgaagatgtcgccgcctgagaagctctgtggctcttgtccggaaggaggc
cggccgtctggagctgaggatggcgctgcctcagaagctctgtggctctt
gccgggaaggtggctggttgtctggagttgaagatggcgccgcccagaag
ctctgcgactctcgcccgtcccagaaacggctggcactctgtattccaca
cggtcacccgtgcagcctgccctccgcggagtcccggagccaagaaggct
ctcgccggcgcctgtgccataaacctctcaggcctggcagacccccgtgc
tctcaccaggaaaggtggccggctatctggagctgaagatggcgccgccc
agaagctctgcgagtctcgcccgtcccagaaacggctggcactctgtatt
ccacacggtcacccgtgcagcctgctctccgcggagttccggagccagag
gctcccatcggtgcctgtgccacaaacctctcagccgggcagacctccgt
gctctcacaggagtgccggctatctgactaatatgttggttctttcattc
cctatatcatgctttattcaaagggctccgagtcttggattgttgtgtgg
gcatggatttaaacattacacgtctcaggatcattcttattctgacctca
ccggaatccctttgggagttcaatgacgcctaggtacatctgtaaataag
gtgagca
gaattctttgaaagtgtactcagtgtggaaatatggaggttgatttagac
atactgatcaggaaatattgttagtgttaagcctaagcagaaaatataat
cgagaaggaaagcttattgtccttttacccatgttaacagaagcgacaca
cctactttgtacataacaatgtagatataataataatcactacaacattt
agccaagctctgcctactttctgataaatgccaaggggtagtgagattaa
gaccacagacatgatgccagagtttggacccagatctccaggccccagtg
aagaacatttcagctatgcctcagataagtacatgtgatacacatataca
actaagtccatttaacttggcttgacttcagccctcattgccagtcttct
caatacacagcaaacttgagaaacttctgttgacatttgttgttatgttt
gagtgagaatctggccatggtcagtaagaaagctatcaatcagagctttt
gttgtaccaagcttgtcccttgatttaaaactattggttaattaaattgg
atataggcaactaatagagggattaaatattggtgggtttggagtgacct
ggttggaggaggagagaccaggagttaatggaggtataaggagaggagag
taggaagccatcatgaggggagatggaccaggagcatgtggccaggagaa
atagcaagtatcttgggtacatcactgggaaggtagccaggccagcagtt
agaagagtagataggggttaccccccagtattgtcaaagaataaataaca
taaccagaatccaattcctatttattggtaagtagtagggtataaactta
aaagagattgaactacaaatacttgtctttgtgttcgtatacattcttgg
ggttattttctaaactgtaattcctgacctagaaacattagtgggtttgt
ta
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr17_69016258_69017214
seq2: B6Ng01-048I10.g_68_1019 (reverse)

seq1  TAACAAACCCACTAATGTTTTCTATGTTCAGGAATATCAGTTTGGAAAAT  50
      ||||||||||||||||| |||||| | ||||||||  |||||| ||||||
seq2  TAACAAACCCACTAATG-TTTCTA-GGTCAGGAATTACAGTTTAGAAAAT  48

seq1  AACCCCAAGAATGTATACGAACAACAAAAGACAAGTATTTGTAGTTCAAT  100
      |||||||||||||||||||||||   ||||||||||||||||||||||||
seq2  AACCCCAAGAATGTATACGAACA--CAAAGACAAGTATTTGTAGTTCAAT  96

seq1  CTC-TTTAAGTTTATACCCTACTAACTTACCAATAAATAAGAATTGGATT  149
      ||| ||||||||||||||||||| ||||||||||||||| ||||||||||
seq2  CTCTTTTAAGTTTATACCCTACT-ACTTACCAATAAATAGGAATTGGATT  145

seq1  CTGGTTATGTTATTTA-TCTTTGACAATTACTGGGGGGTAACCCCTAATC  198
      |||||||||||||||| |||||||||| |||||||||||||||||| |||
seq2  CTGGTTATGTTATTTATTCTTTGACAA-TACTGGGGGGTAACCCCT-ATC  193

seq1  TACTCTTCTAACTGCTGGCCTGGCTACCTTCCCAGTGATGTACCCAAGAT  248
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACTCTTCTAACTGCTGGCCTGGCTACCTTCCCAGTGATGTACCCAAGAT  243

seq1  ACTTGCTATTTCTCCTGGCCACATGCTCCTGGTCCATCTCCCCTCATGAT  298
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTGCTATTTCTCCTGGCCACATGCTCCTGGTCCATCTCCCCTCATGAT  293

seq1  GGCTTCCTACTCTCCTCTCCTTATACCTCCATTAACTCCTGGTCTCTCCT  348
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCTTCCTACTCTCCTCTCCTTATACCTCCATTAACTCCTGGTCTCTCCT  343

seq1  CCTCCAACCAGGTCACTCCAAACCCACCAATATTTAATCCCTCTATTAGT  398
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTCCAACCAGGTCACTCCAAACCCACCAATATTTAATCCCTCTATTAGT  393

seq1  TGCCTATATCCAATTTAATTAACCAATAGTTTTAAATCAAGGGACAAGCT  448
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCCTATATCCAATTTAATTAACCAATAGTTTTAAATCAAGGGACAAGCT  443

seq1  TGGTACAACAAAAGCTCTGATTGATAGCTTTCTTACTGACCATGGCCAGA  498
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGTACAACAAAAGCTCTGATTGATAGCTTTCTTACTGACCATGGCCAGA  493

seq1  TTCTCACTCAAACATAACAACAAATGTCAACAGAAGTTTCTCAAGTTTGC  548
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTCACTCAAACATAACAACAAATGTCAACAGAAGTTTCTCAAGTTTGC  543

seq1  TGTGTATTGAGAAGACTGGCAATGAGGGCTGAAGTCAAGCCAAGTTAAAT  598
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGTATTGAGAAGACTGGCAATGAGGGCTGAAGTCAAGCCAAGTTAAAT  593

seq1  GGACTTAGTTGTATATGTGTATCACATGTACTTATCTGAGGCATAGCTGA  648
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGACTTAGTTGTATATGTGTATCACATGTACTTATCTGAGGCATAGCTGA  643

seq1  AATGTTCTTCACTGGGGCCTGGAGATCTGGGTCCAAACTCTGGCATCATG  698
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGTTCTTCACTGGGGCCTGGAGATCTGGGTCCAAACTCTGGCATCATG  693

seq1  TCTGTGGTCTTAATCTCACTACCCCTTGGCATTTATCAGAAAGTAGGCAG  748
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGTGGTCTTAATCTCACTACCCCTTGGCATTTATCAGAAAGTAGGCAG  743

seq1  AGCTTGGCTAAATGTTGTAGTGATTATTATTATATCTACATTGTTATGTA  798
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTTGGCTAAATGTTGTAGTGATTATTATTATATCTACATTGTTATGTA  793

seq1  CAAAGTAGGTGTGTCGCTTCTGTTAACATGGGTAAAAGGACAATAAGCTT  848
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAAGTAGGTGTGTCGCTTCTGTTAACATGGGTAAAAGGACAATAAGCTT  843

seq1  TCCTTCTCGATTATATTTTCTGCTTAGGCTTAACACTAACAATATTTCCT  898
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTTCTCGATTATATTTTCTGCTTAGGCTTAACACTAACAATATTTCCT  893

seq1  GATCAGTATGTCTAAATCAACCTCCATATTTCCACACTGAGTACACTTTC  948
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATCAGTATGTCTAAATCAACCTCCATATTTCCACACTGAGTACACTTTC  943

seq1  AAAGAATTC  957
      |||||||||
seq2  AAAGAATTC  952