MoG+ -Mouse Genome database with high added value-

BAC Information

BAC name
Region	Chromosome -
Gene	search by nearby gene name.
Format	rows / page	Page	1

BAC

Clone Name	B6Ng01-048N01
Chromosome	17 (Build37)
Map Location	9,036,914 - 9,186,065
singlet/doublet	doublet
Overlap gene	Pde10a, 1700010I14Rik
Upstream gene	LOC100040748, LOC100040760, LOC667102, Tagap, Rshl2a, LOC100040822, Rnaset2a, Fgfr1op, Ccr6, LOC667114, Brp44l, Sft2d1, LOC100038858, 9630019K15Rik, EG435502, LOC433063, T2, T, LOC100040817
Downstream gene	EG667165, EG667170, LOC666143, 4932702K14Rik
Link	Open Mouse BAC browser

Click to get alignment info.

name	LOC100040748 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100040748
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 Proteins

name	LOC100040760 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100040760
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 Proteins

name	LOC667102 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:667102
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 9 Proteins pseudo : _no_value

name	Tagap (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:72536 MGI:3615484
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Rshl2a (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:66832 MGI:1914082
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC100040822 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100040822
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 3 mRNAs, 17 ESTs, 1 Protein

name	Rnaset2a (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:100037283 MGI:1915445
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 7 mRNAs, 127 ESTs, 2 Proteins

name	Fgfr1op (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:75296 MGI:1922546
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Ccr6 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:12458 MGI:1333797
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC667114 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:667114
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 49 ESTs, 3 Proteins pseudo : _no_value

name	Brp44l (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:55951 MGI:1915240
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Sft2d1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:106489 MGI:1918689
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC100038858 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100038858
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	9630019K15Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:320111 MGI:2443403
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	EG435502 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:435502 MGI:3647869
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 3 Proteins pseudo : _no_value

name	LOC433063 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:433063
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 540 ESTs, 2 Proteins pseudo : _no_value

name	T2 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:21331 MGI:104658
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	T (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:20997 MGI:98472
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC100040817 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100040817
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 Protein pseudo : _no_value

name	Pde10a (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:23984 MGI:1345143
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	1700010I14Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:66931 MGI:1914181
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	EG667165 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:667165 MGI:3648092
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 3 Proteins pseudo : _no_value

name	EG667170 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:667170 MGI:3643249
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 25 Proteins pseudo : _no_value

name	LOC666143 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:666143
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 Proteins pseudo : _no_value

name	4932702K14Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:67543 MGI:1914793
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA pseudo : _no_value

name	LOC100040748 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149268391 GeneID:100040748
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 Proteins product : similar to Ubtf protein transcript_id : XM_001475177.1

name	LOC100040760 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149268393 GeneID:100040760
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 Proteins product : similar to Ubtf protein transcript_id : XM_001475200.1

name	Tagap (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:22165373 GeneID:72536 MGI:3615484
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : T-cell activation Rho GTPase-activating protein transcript_id : NM_145968.1

name	Rshl2a (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:141803214 GeneID:66832 MGI:1914082
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : radial spokehead-like 2A transcript_id : NM_025789.4

name	LOC100040822 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149268396 GeneID:100040822
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 8 ESTs product : hypothetical protein LOC100040822, transcript variant 1 transcript_id : XM_001476254.1

name	LOC100040822 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149268398 GeneID:100040822
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 8 ESTs product : hypothetical protein LOC100040822, transcript variant 2 transcript_id : XM_001476269.1

name	LOC100040822 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149268400 GeneID:100040822
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 mRNAs, 13 ESTs, 1 Protein product : hypothetical protein LOC100040822, transcript variant 3 transcript_id : XM_001476289.1

name	Rnaset2a (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:149268402 GeneID:100037283 MGI:1915445
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 7 mRNAs, 126 ESTs, 2 Proteins product : ribonuclease T2A, transcript variant 1 transcript_id : XM_001476345.1

name	Rnaset2a (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:149268404 GeneID:100037283 MGI:1915445
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 113 ESTs, 1 Protein product : ribonuclease T2A, transcript variant 2 transcript_id : XM_001476365.1

name	Fgfr1op (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142365869 GeneID:75296 MGI:1922546
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : Fgfr1 oncogene partner transcript_id : NM_201230.3

name	Ccr6 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:141803448 GeneID:12458 MGI:1333797
definition	exception : mismatches in transcription note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : chemokine (C-C motif) receptor 6 transcript_id : NM_009835.3

name	Brp44l (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142360084 GeneID:55951 MGI:1915240
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : brain protein 44-like transcript_id : NM_018819.4

name	Sft2d1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:88853574 GeneID:106489 MGI:1918689
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : SFT2 domain containing 1 transcript_id : NM_134114.2

name	LOC100038858 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149268388 GeneID:100038858
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : hypothetical protein LOC100038858 transcript_id : XM_001471593.1

name	9630019K15Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:40254340 GeneID:320111 MGI:2443403
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : RIKEN cDNA 9630019K15 gene transcript_id : NM_178774.3

name	T2 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:7305536 GeneID:21331 MGI:104658
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : brachyury 2 transcript_id : NM_013682.1

name	T (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:118130357 GeneID:20997 MGI:98472
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : brachyury transcript_id : NM_009309.2

name	Pde10a (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:70909346 GeneID:23984 MGI:1345143
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : phosphodiesterase 10A transcript_id : NM_011866.2

name	1700010I14Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142384085 GeneID:66931 MGI:1914181
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : RIKEN cDNA 1700010I14 gene transcript_id : NM_025851.2

name	LOC100040748 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149268392 GeneID:100040748
definition	codon_start : 1 product : hypothetical protein protein_id : XP_001475227.1

name	LOC100040760 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149268394 GeneID:100040760
definition	codon_start : 1 product : hypothetical protein protein_id : XP_001475250.1

name	Tagap (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:22165374 CCDS:CCDS28379.1 GeneID:72536 MGI:3615484
definition	codon_start : 1 product : T-cell activation Rho GTPase-activating protein protein_id : NP_666080.1

name	Rshl2a (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:55741725 GeneID:66832 MGI:1914082
definition	GO_component : GO:0016020 - membrane [Evidence IEA]; GO:0016469 - proton-transporting two-sector ATPase complex [Evidence IEA] GO_function : GO:0046933 - hydrogen-transporting ATP synthase activity, rotational mechanism [Evidence IEA]; GO:0046961 - hydrogen-transporting ATPase activity, rotational mechanism [Evidence IEA] GO_process : GO:0015986 - ATP synthesis coupled proton transport [Evidence IEA] codon_start : 1 exception : mismatches in translation note : radial spokehead-like 2 product : radial spokehead-like 2A protein_id : NP_080065.3

name	LOC100040822 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149268397 GeneID:100040822
definition	codon_start : 1 product : hypothetical protein isoform 1 protein_id : XP_001476304.1

name	LOC100040822 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149268399 GeneID:100040822
definition	codon_start : 1 product : hypothetical protein isoform 2 protein_id : XP_001476319.1

name	LOC100040822 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149268401 GeneID:100040822
definition	codon_start : 1 product : hypothetical protein isoform 3 protein_id : XP_001476339.1

name	Rnaset2a (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:149268405 GeneID:100037283 MGI:1915445
definition	codon_start : 1 product : ribonuclease T2A isoform 2 protein_id : XP_001476415.1

name	Rnaset2a (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:149268403 GeneID:100037283 MGI:1915445
definition	codon_start : 1 product : ribonuclease T2A isoform 1 protein_id : XP_001476395.1

name	Fgfr1op (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:47777353 CCDS:CCDS28380.1 GeneID:75296 MGI:1922546
definition	GO_component : GO:0005575 - cellular_component [Evidence ND] GO_function : GO:0003674 - molecular_function [Evidence ND] GO_process : GO:0008150 - biological_process [Evidence ND] codon_start : 1 product : Fgfr1 oncogene partner protein_id : NP_957682.1

name	Ccr6 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:6753318 CCDS:CCDS28381.1 GeneID:12458 MGI:1333797
definition	GO_component : GO:0016020 - membrane [Evidence IEA] GO_function : GO:0004945 - angiotensin type II receptor activity [Evidence IEA]; GO:0016493 - C-C chemokine receptor activity [Evidence IEA]; GO:0004930 - G-protein coupled receptor activity [Evidence IEA]; GO:0005515 - protein binding [Evidence IPI]; GO:0004872 - receptor activity [Evidence IEA]; GO:0001584 - rhodopsin-like receptor activity [Evidence IEA]; GO:0004871 - signal transducer activity [Evidence IEA] GO_process : GO:0007186 - G-protein coupled receptor protein signaling pathway [Evidence IEA]; GO:0007165 - signal transduction [Evidence IEA] codon_start : 1 product : chemokine (C-C motif) receptor 6 protein_id : NP_033965.1

name	Brp44l (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:9055178 GeneID:55951 MGI:1915240
definition	GO_component : GO:0005743 - mitochondrial inner membrane [Evidence IDA] GO_function : GO:0003674 - molecular_function [Evidence IEA] [Evidence ND] GO_process : GO:0008150 - biological_process [Evidence ND] codon_start : 1 note : apoptosis-regulating basic protein product : brain protein 44-like protein_id : NP_061289.1

name	Sft2d1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:88853575 GeneID:106489 MGI:1918689
definition	GO_component : GO:0016020 - membrane [Evidence IEA] GO_process : GO:0015031 - protein transport [Evidence IEA]; GO:0006810 - transport [Evidence IEA] codon_start : 1 product : SFT2 domain containing 1 protein_id : NP_598875.2

name	LOC100038858 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149268389 GeneID:100038858
definition	codon_start : 1 product : hypothetical protein protein_id : XP_001471643.1

name	9630019K15Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:40254341 CCDS:CCDS28382.1 GeneID:320111 MGI:2443403
definition	GO_component : GO:0005783 - endoplasmic reticulum [Evidence IEA] GO_function : GO:0003674 - molecular_function [Evidence IEA] codon_start : 1 exception : mismatches in translation product : hypothetical protein LOC320111 protein_id : NP_848889.2

name	T2 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:7305537 GeneID:21331 MGI:104658
definition	codon_start : 1 exception : mismatches in translation product : brachyury 2 protein_id : NP_038710.1

name	T (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:6678203 CCDS:CCDS28383.1 GeneID:20997 MGI:98472
definition	GO_component : GO:0005634 - nucleus [Evidence IEA] GO_function : GO:0003677 - DNA binding [Evidence IEA]; GO:0003700 - transcription factor activity [Evidence IEA] GO_process : GO:0009952 - anterior/posterior pattern formation [Evidence IMP]; GO:0007275 - development [Evidence IEA]; GO:0001839 - neural plate morphogenesis [Evidence IMP]; GO:0030903 - notochord development [Evidence IMP]; GO:0006355 - regulation of transcription, DNA-dependent [Evidence IEA]; GO:0001756 - somitogenesis [Evidence IMP]; GO:0006350 - transcription [Evidence IEA] codon_start : 1 note : brachyury-like 3; brachyury-like 2; low ratio; brachyury(T) product : brachyury protein_id : NP_033335.1

name	Pde10a (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:70909347 CCDS:CCDS28384.1 GeneID:23984 MGI:1345143
definition	GO_function : GO:0004114 - 3',5'-cyclic-nucleotide phosphodiesterase activity [Evidence IDA] codon_start : 1 note : dual-substrate cAMP and cGMP, cyclic nucleotide phosphodiesterase product : phosphodiesterase 10A protein_id : NP_035996.2

name	1700010I14Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:13385330 CCDS:CCDS28385.1 GeneID:66931 MGI:1914181
definition	codon_start : 1 exception : mismatches in translation product : hypothetical protein LOC66931 protein_id : NP_080127.1

name	LOC667102 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:667102
definition	number : 6 pseudo : _no_value

name	LOC667102 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:667102
definition	number : 5 pseudo : _no_value

name	LOC667102 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:667102
definition	number : 4 pseudo : _no_value

name	LOC667102 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:667102
definition	number : 3 pseudo : _no_value

name	LOC667102 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:667102
definition	number : 2 pseudo : _no_value

name	LOC667102 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:667102
definition	number : 1 pseudo : _no_value

name	EG435502 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:435502
definition	number : 1 pseudo : _no_value

name	LOC100040817 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100040817
definition	number : 2 pseudo : _no_value

name	LOC100040817 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100040817
definition	number : 1 pseudo : _no_value

name	EG667165 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:667165
definition	number : 1 pseudo : _no_value

name	EG667165 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:667165
definition	number : 2 pseudo : _no_value

name	EG667170 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:667170
definition	number : 4 pseudo : _no_value

name	LOC666143 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:666143
definition	number : 2 pseudo : _no_value

name	LOC666143 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:666143
definition	number : 1 pseudo : _no_value

name	EG667170 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:667170
definition	number : 3 pseudo : _no_value

name	EG667170 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:667170
definition	number : 2 pseudo : _no_value

name	EG667170 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:667170
definition	number : 1 pseudo : _no_value

name	LOC667114 (CDS detail)
type	misc_RNA
link	vega ensembl NCBI
xref	GI:149268395 GeneID:667114
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 49 ESTs, 3 Proteins product : similar to Phosphopantothenoylcysteine synthetase pseudo : _no_value transcript_id : XR_032140.1

name	LOC433063 (CDS detail)
type	misc_RNA
link	vega ensembl NCBI
xref	GI:149268408 GeneID:433063
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 540 ESTs, 2 Proteins product : similar to ribosomal protein L15 pseudo : _no_value transcript_id : XR_032837.1

name	4932702K14Rik (CDS detail)
type	misc_RNA
link	vega ensembl MGI NCBI
xref	GI:149268390 GeneID:67543 MGI:1914793
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : RIKEN cDNA 4932702K14 gene pseudo : _no_value transcript_id : XR_035111.1

clone name	MSMg01-265A07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-422H14
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-080C19
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-439G11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-408B08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-275N11
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-545B12
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-147A23
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-365B12
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-098J02
singlet/doublet	doublet
plural/unique	plural

clone name	MSMg01-386H12
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-124H03
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-450A10
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-375N19
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-532G01
singlet/doublet	doublet
plural/unique	plural

clone name	MSMg01-379K16
singlet/doublet	doublet
plural/unique	plural

clone name	MSMg01-359O14
singlet/doublet	doublet
plural/unique	plural

clone name	MSMg01-520D23
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-493C08
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-130K23
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-542I12
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-213A14
singlet/doublet	doublet
plural/unique	plural

clone name	MSMg01-125C12
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-394E16
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-209C11
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-517O12
singlet/doublet	doublet
plural/unique	plural

clone name	MSMg01-519M05
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-438B20
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-085I12
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-442G01
singlet/doublet	doublet
plural/unique	plural

clone name	MSMg01-464F21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-323N13
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-047M21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-317K15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-403B22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-515I04
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-425N18
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-548B11
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-444C06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-391C11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-095E04
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-505E18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-080A16
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-173E17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-420B07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-452J01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-068A16
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-529M07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-467N03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-344B02
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-046E03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-322A23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-451N23
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-442E14
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-369F03
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-084P07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-463J16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-505J17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-268I15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-116J19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-276F21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-057K21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-448G20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-482L18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-379I17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-080K20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-339F17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-144P11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-476P12
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-516J18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-541J22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-191P10
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-056A04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-546F05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-543M20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-469B07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-459A14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-445P19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-323M14
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-114O24
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-547D02
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-512H10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-436F01
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-451A10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-547D14
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-272O15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-467L01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-072K04
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-456J19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-412J13
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-107A16
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-547C07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-156N15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-332B18
singlet/doublet	doublet
plural/unique	plural

clone name	MSMg01-434J03
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-521F11
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-279K12
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-358D01
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-448J21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-509M01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-541E16
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-461I22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-403L19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-527A18
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-462K04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-399I16
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-517E23
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-261L05
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-203K11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-445J19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-458O11
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-519G20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-331N21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-511A15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-197M08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-146A15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-348N08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-407P20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-046K12
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-119G15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-491N14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-075O21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-080E08
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-007E15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-350B04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-317C09
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-315D13
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-161P17
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-111C04
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-092D03
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-335O05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-074K19
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-081O02
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-034A11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-207O02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-329A11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-040D22
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-334N07
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-134D04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-238P16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-125C11
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-090O12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-307A03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-257N04
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-283M13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-213M02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-219I15
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-335K14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-265M06
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-049B07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-076J06
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-004F17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-046D09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-339M20
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-048N01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-174A18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-329E19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-294L13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-159P06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-238H10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-129G13
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-323N05
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-091H16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-035E23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-243A11
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-077K14
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-239G04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-315C20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-051G18
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-282P12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-169J08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-052D09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-156D05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-102H14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-057C18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-344J02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-129E24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-238G12
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-017I04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-046C23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-301N21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-302J01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-230H16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-055L04
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-005C06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-004L08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-229D21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-295D06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-347O09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-189P06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-174L08
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-208L03
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-276A07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-166O09
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-339N05
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-090E13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-349A08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-219N14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-248E10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-099O03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-128K13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-107E01
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-142P22
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-057F12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-134D20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-339A10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-266M22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-227A18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-300P18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-342J16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-122G18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-057F19
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-140M10
singlet/doublet	doublet
plural/unique	unique

BAC End Information

BAC end	BAC-end 1	BAC-end 2
end name	B6Ng01-048N01.b	B6Ng01-048N01.g
ACC	DH873262	DH873263
length	953	883
definition	DH873262\|Mus musculus domesticus DNA, BAC clone: B6Ng01-048N01, 5' end.	DH873263\|Mus musculus domesticus DNA, BAC clone: B6Ng01-048N01, 3' end.
singlet/doublet	doublet	doublet
BLAST hit	unique	unique
Map location.	(9,185,122 - 9,186,065)	(9,036,914 - 9,037,799)
sequence	gaattcttcccaaagtgtgctgcccaagtaagcaaggttccctctcagcc tacagtcacatcacccatcacagcctccaccagcataccccatcatttct aacccaatagcccctgtgtcatcactggcccagactcttctctcccatct ttgataagaggtaagggggacgacgttctcctggagtccagacccagtat ttccatagctgctggtcatgaattcaccaccagtttacccctgtccaacg tcaccttactgaccatgctgggtgttagaggcagcagcagctttgctgca ttctgcctggacacctcactgaggtacttcaggataagttggggcccaca agggtctttgagcttcagccccatgttgacagcattgccgagttccccat acacacacacacacacacacacacacacacacacacacacacacttacct ccttcagtctgttctcatgggccacagccaccttgctccccgtgaagtca tacttcagggtttcttcctttgccagcacttctctttggaaactcaggaa cttcttgtagctgtcggctttcgttataccagctaggtaggggctgatgt aacggtacacatccctgcctggggcagacctggagcactggcggctggat accacctctgggtatctgagcactttcatctcaggcagcctgagttcttt ccttcatgtgtttttcccgagaaaatgcaagtctttcctttcagttcctt ctcctcctcctgcagagccgcggaggcaccatctttgagagcacgggagg cctgttacgcgtggggttcaggtacctgaaacagtggcgtgttgtgtgtt gtcatcgggatgcagggctgtgctcacttgtaagtgaacccaagcgtcct tcatcttctgataacttctttgtttctggaggcccggggggatggttggt gtg	gaattcacccgagcaggctctgtgcaaagcattttgtttatgtcgccatg ctcattaacagtgttaatcattgattcttggtcacacacatgtgactttg agcactgtgcctatgctctggattcccttatctgactccttggccattat gcagcaagctcttgtgagcacctgccgtgttcccagctctctacaagatc ccaggatcagtgcaggagcagggagtagtttccttgggatagggaccagg gagagaaactaagcaagcccagtgtcggggtgataaagggacgatggcaa agagaccactgggatgatttagttggaacctgtttctttcagctacagtc ttagataggtgtctcttcctcactttctgaactatttgaccttcatgtct cattcttaaaatgagaggaaattcaaaggtttcaatcgcttgggtatgga tagctaccaccctggggtagcattagcgatgaaaaagaatttgaaggcct ggccttccacagcctataagaaatgtttgctgttctaggagacatgctct gaagagacccatcaagggatggggtgtggcagttgtgcagaggaggtgtg gacctgtactctgacaggaataggaagcgaaggactttccaggctaaagg gaaacagtctgacgtactctgaaacattacgtgaagtacaagaaaattat cattagaagaacgaaggcacaaagaagaccacatcaaagtctccctaggc agtgggtggctgggcagaactctggctttgtgctgtacacaggcacccag aagcttctgttgaagatctattctggctttaaaagtgggttctggaagct taaaaacatgcaggatgaggagaactcagagga
quality values	Open. Hide. 61 33 45 27 61 61 61 61 61 61 36 32 55 61 61 61 47 47 47 61 61 49 61 61 49 38 61 55 55 52 31 23 36 23 19 23 36 35 35 59 59 59 61 61 61 61 59 59 61 61 61 61 61 61 59 61 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 44 59 59 59 59 59 35 55 49 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 61 61 61 61 61 59 61 61 61 61 59 59 61 61 61 61 61 61 61 61 61 61 61 61 59 61 59 61 59 61 61 61 61 61 61 61 59 61 59 61 59 59 61 61 61 61 61 61 61 61 59 59 59 61 61 61 61 59 61 59 59 61 59 61 59 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 61 61 61 61 59 61 55 55 55 55 61 61 61 55 61 61 55 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 55 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 55 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 55 49 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 53 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 52 61 46 61 53 61 53 61 61 61 61 61 61 61 47 61 53 61 61 33 47 61 57 57 57 53 47 47 47 53 50 53 57 57 53 53 57 57 53 50 53 53 57 57 47 47 47 53 53 53 53 53 47 45 57 53 53 53 53 57 53 53 53 53 53 50 53 53 53 53 42 53 46 50 57 53 57 53 57 45 50 27 46 53 45 57 57 52 53 52 52 47 38 57 57 53 53 35 29 52 53 53 52 57 57 52 57 40 53 50 52 35 47 53 53 57 47 57 52 43 20 46 46 46 33 43 47 50 57 46 53 40 52 36 53 46 34 27 52 34 38 36 53 57 21 22 11 7 12 24 42 38 57 40 35 40 57 53 22 6 23 28 53 44 57 57 57 36 40 37 52 27 47 47 43 38 37 33 57 37 40 48 34 33 32 48 31 44 27 40 48 28 37 31 30 53 53 45 30 40 12 53 18 47 39 53 35 34 13 35 33 29 41 40 30 22 27 44 25 41 34 31 30 25 27 30 24 29 31 28 30 29 29 31 46 31 29 41 36 33 30 19 40 19 48 35 28 28 44 32 21 24 39 30 29 29 17 10 29 17 32 34 28 41 29 29 38 25 47 15 19 5 45 16 31 16 24 36 26 25 29 44 28 31 29 43 39 46 29 29 33 21 15 43 14 46 46 43 22 29 31 18 27 30 29 43 23 18 46 51 20 33 14 37 24 22 14 9 39 39 13 28 22 23 21 18 17 36 17 14 26 16 14 26 21 29 28 33 15 26 6 14 19 16 17 21 6 46 8 29 17 17 21 26 23 29 12 17 30 38 18 31 6 27 7 17 18 28 19 38 33 39 20 22 17 17 25 18 6 11 23 28 17 14 10 19 19 51 36 11 33 8 20 20 22 27 15 20 26 14 28 8 14 38 20 26 15 18 6 20 23 20 19 13 25 12 30 22 9 17 6 9 7 9 17 20 17 23 18 17 6 12 13 21 12 17 31 9 13 32 23 7 29 16 24 7 12 11 6 13 8 6 5 6 9 6 4 4 5 8 20 16 17 32 13 18 6 17 33 20 8 22 8 14 22 15 20 13 7 5 4 5 6 11 27 16 9 7 6 26 12 14 19 30 22 20 13 33 21 12 16 22 6 9 5 15 11 31 13 20 29 30 9 13 5 7 7 15 14 6 4 14 30 6 8 5 4	Open. 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Alignment Information

BAC End 1

BAC End 2

seq1: chr17_9185122_9186065
seq2: B6Ng01-048N01.b_46_998 (reverse)

seq1  CACACCCACCATCCCCCC-GGCCTCCAGAAACAAAGAAG-TATCAG-AGA  47
      |||||| ||||||||||| |||||||||||||||||||| |||||| |||
seq2  CACACCAACCATCCCCCCGGGCCTCCAGAAACAAAGAAGTTATCAGAAGA  50

seq1  TGAAGGACGCTTGGGTTCACTTTACAGTGAGCACAGCCCTGCATCCCGAT  97
      ||||||||||||||||||||||   |||||||||||||||||||||||||
seq2  TGAAGGACGCTTGGGTTCACTTACAAGTGAGCACAGCCCTGCATCCCGAT  100

seq1  GAC-ACACACAACACGCCACTG-TTCAGGTACCTGAA-CCCACGCGT-AC  143
      ||| |||||||||||||||||| |||||||||||||| ||||||||| ||
seq2  GACAACACACAACACGCCACTGTTTCAGGTACCTGAACCCCACGCGTAAC  150

seq1  AGGCCTCCCGTGCTCTCAAAGATGGTGCCTCCGCGGCTCTGCAGGAGGAG  193
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGCCTCCCGTGCTCTCAAAGATGGTGCCTCCGCGGCTCTGCAGGAGGAG  200

seq1  GAGAAGGAACTG-AAGGAAAGACTTGCATTTTCTCGGGAAAAACACATGA  242
      |||||||||||| |||||||||||||||||||||||||||||||||||||
seq2  GAGAAGGAACTGAAAGGAAAGACTTGCATTTTCTCGGGAAAAACACATGA  250

seq1  AGG-AAGAACTCAGGCTGCCTGAGATGAAAGTGCTCAGATACCCAGAGGT  291
      ||| ||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGAAAGAACTCAGGCTGCCTGAGATGAAAGTGCTCAGATACCCAGAGGT  300

seq1  GGTATCCAGCCGCCAGTGCTCCAGGTCTGCCCCAGGCAGGGATGTGTACC  341
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTATCCAGCCGCCAGTGCTCCAGGTCTGCCCCAGGCAGGGATGTGTACC  350

seq1  GTTACATCAGCCCCTACCTAGCTGGTATAACGAAAGCCGACAGCTACAAG  391
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTACATCAGCCCCTACCTAGCTGGTATAACGAAAGCCGACAGCTACAAG  400

seq1  AAGTTCCTGAGTTTCCAAAGAGAAGTGCTGGCAAAGGAAGAAACCCTGAA  441
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTTCCTGAGTTTCCAAAGAGAAGTGCTGGCAAAGGAAGAAACCCTGAA  450

seq1  GTATGACTTCACGGGGAGCAAGGTGGCTGTGGCCCATGAGAACAGACTGA  491
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTATGACTTCACGGGGAGCAAGGTGGCTGTGGCCCATGAGAACAGACTGA  500

seq1  AGGAGGTAAGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG  541
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGAGGTAAGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG  550

seq1  TGTATGGGGAACTCGGCAATGCTGTCAACATGGGGCTGAAGCTCAAAGAC  591
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTATGGGGAACTCGGCAATGCTGTCAACATGGGGCTGAAGCTCAAAGAC  600

seq1  CCTTGTGGGCCCCAACTTATCCTGAAGTACCTCAGTGAGGTGTCCAGGCA  641
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTGTGGGCCCCAACTTATCCTGAAGTACCTCAGTGAGGTGTCCAGGCA  650

seq1  GAATGCAGCAAAGCTGCTGCTGCCTCTAACACCCAGCATGGTCAGTAAGG  691
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATGCAGCAAAGCTGCTGCTGCCTCTAACACCCAGCATGGTCAGTAAGG  700

seq1  TGACGTTGGACAGGGGTAAACTGGTGGTGAATTCATGACCAGCAGCTATG  741
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGACGTTGGACAGGGGTAAACTGGTGGTGAATTCATGACCAGCAGCTATG  750

seq1  GAAATACTGGGTCTGGACTCCAGGAGAACGTCGTCCCCCTTACCTCTTAT  791
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAATACTGGGTCTGGACTCCAGGAGAACGTCGTCCCCCTTACCTCTTAT  800

seq1  CAAAGATGGGAGAGAAGAGTCTGGGCCAGTGATGACACAGGGGCTATTGG  841
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAAGATGGGAGAGAAGAGTCTGGGCCAGTGATGACACAGGGGCTATTGG  850

seq1  GTTAGAAATGATGGGGTATGCTGGTGGAGGCTGTGATGGGTGATGTGACT  891
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTAGAAATGATGGGGTATGCTGGTGGAGGCTGTGATGGGTGATGTGACT  900

seq1  GTAGGCTGAGAGGGAACCTTGCTTACTTGGGCAGCACACTTTGGGAAGAA  941
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAGGCTGAGAGGGAACCTTGCTTACTTGGGCAGCACACTTTGGGAAGAA  950

seq1  TTC  944
      |||
seq2  TTC  953

seq1: chr17_9036914_9037799
seq2: B6Ng01-048N01.g_66_948

seq1  GAATTCACCCGAGCAGGCTCTGTGCAAAGCATTTTGTTTATGTCGCCATG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCACCCGAGCAGGCTCTGTGCAAAGCATTTTGTTTATGTCGCCATG  50

seq1  CTCATTAACAGTGTTAATCATTGATTCTTGGTCACACACATGTGACTTTG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCATTAACAGTGTTAATCATTGATTCTTGGTCACACACATGTGACTTTG  100

seq1  AGCACTGTGCCTATGCTCTGGATTCCCTTATCTGACTCCTTGGCCATTAT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCACTGTGCCTATGCTCTGGATTCCCTTATCTGACTCCTTGGCCATTAT  150

seq1  GCAGCAAGCTCTTGTGAGCACCTGCCGTGTTCCCAGCTCTCTACAAGATC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAGCAAGCTCTTGTGAGCACCTGCCGTGTTCCCAGCTCTCTACAAGATC  200

seq1  CCAGGATCAGTGCAGGAGCAGGGAGTAGTTTCCTTGGGATAGGGACCAGG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGGATCAGTGCAGGAGCAGGGAGTAGTTTCCTTGGGATAGGGACCAGG  250

seq1  GAGAGAAACTAAGCAAGCCCAGTGTCGGGGTGATAAAGGGACGATGGCAA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGAGAAACTAAGCAAGCCCAGTGTCGGGGTGATAAAGGGACGATGGCAA  300

seq1  AGAGACCACTGGGATGATTTAGTTGGAACCTGTTTCTTTCAGCTACAGTC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGACCACTGGGATGATTTAGTTGGAACCTGTTTCTTTCAGCTACAGTC  350

seq1  TTAGATAGGTGTCTCTTCCTCACTTTCTGAACTATTTGACCTTCATGTCT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAGATAGGTGTCTCTTCCTCACTTTCTGAACTATTTGACCTTCATGTCT  400

seq1  CATTCTTAAAATGAGAGGAAATTCAAAGGTTTCAATCGCTTGGGTATGGA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTCTTAAAATGAGAGGAAATTCAAAGGTTTCAATCGCTTGGGTATGGA  450

seq1  TAGCTACCACCCTGGGGTAGCATTAGCGATGAAAAAGAATTTGAAGGCCT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGCTACCACCCTGGGGTAGCATTAGCGATGAAAAAGAATTTGAAGGCCT  500

seq1  GGCCTTCCACAGCCTATAAGAAATGTTTGCTGTTCTAGGAGACATGCTCT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCCTTCCACAGCCTATAAGAAATGTTTGCTGTTCTAGGAGACATGCTCT  550

seq1  GAAGAGACCCATCAAGGGATGGGGTGTGGCAGTTGTGCAGAGGAGGTGTG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGAGACCCATCAAGGGATGGGGTGTGGCAGTTGTGCAGAGGAGGTGTG  600

seq1  GACCTGTACTCTGACAGGAATAGGAAGCGAAGGACTTTCCAGGCT-AAGG  649
      ||||||||||||||||||||||||||||||||||||||||||||| ||||
seq2  GACCTGTACTCTGACAGGAATAGGAAGCGAAGGACTTTCCAGGCTAAAGG  650

seq1  GAAACAGTCTGACGTACTCTGAAACATTACGTGAAGTACAAGAAAATTAT  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAACAGTCTGACGTACTCTGAAACATTACGTGAAGTACAAGAAAATTAT  700

seq1  CATTAGAAGAACGAAGGCACAAAGAAGGACCACAATCAAAGTCTCCCTAG  749
      |||||||||||||||||||||||||| |||||| ||||||||||||||||
seq2  CATTAGAAGAACGAAGGCACAAAGAA-GACCAC-ATCAAAGTCTCCCTAG  748

seq1  GCAGTGGGTGGCTGGGCAGAACTCTGGCTTTGTGCTGTACACAGGCCACA  799
      ||||||||||||||||||||||||||||||||||||||||||||| ||| 
seq2  GCAGTGGGTGGCTGGGCAGAACTCTGGCTTTGTGCTGTACACAGG-CACC  797

seq1  CAG-AGCTTCTG-TGAAGATCTATTCTGGCTTTAAAAAGTGGGTTCTGGA  847
      ||| |||||||| |||||||||||||||||||| ||||||||||||||||
seq2  CAGAAGCTTCTGTTGAAGATCTATTCTGGCTTT-AAAAGTGGGTTCTGGA  846

seq1  AGCTTAGAGACAGTGCAGGGATGAGGGAGACTCAGAGGA  886
      |||||| | ||| |||| ||||||||   ||||||||||
seq2  AGCTTAAAAACA-TGCA-GGATGAGGAGAACTCAGAGGA  883

BAC Information

Search Parameter

Search Result

BAC

BAC End Information

Alignment Information